BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0062.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775564.1| amino acid ABC transporter/signal transducti... 358 3e-97 ref|YP_004751936.1| putative amino acid ABC transporter periplas... 347 8e-94 ref|ZP_08275610.1| putative amino acid ABC transporter, periplas... 313 8e-84 ref|YP_443031.1| amino acid ABC transporter periplasmic amino ac... 287 8e-76 ref|ZP_02355796.1| amino acid ABC transporter, periplasmic amino... 286 2e-75 >ref|YP_003775564.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] emb|CAP19663.1| periplasmic component protein [Herbaspirillum seropedicae] gb|ADJ63656.1| ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 358 bits (919), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 182/209 (87%), Positives = 196/209 (93%), Gaps = 7/209 (3%) Query: 12 LLAGL---LLAASVSATVGAHAADLLDTVKARGTLKVALEGNYPPFNFKDPKTSELTGFE 68 LLAG+ LLA+S+S + AADLL +VK+ GTLKVALEGNYPPFNFKDPKT ELTGFE Sbjct: 9 LLAGVGAALLASSLSVS----AADLLQSVKSSGTLKVALEGNYPPFNFKDPKTGELTGFE 64 Query: 69 VDVAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLS 128 VDVAKLLAA+LG+KP FTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLS Sbjct: 65 VDVAKLLAAKLGVKPVFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLS 124 Query: 129 SAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKSVPGIDVKTYPGSPEYLSDLAS 188 SAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAK+VPGIDV+TYPGSPEYL+DLA+ Sbjct: 125 SAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKAVPGIDVRTYPGSPEYLADLAA 184 Query: 189 GRIDAALNDSLLVGYLLKSSNLPLKGGSP 217 GRIDAALNDSLLVGY+LKS+NLPLK GSP Sbjct: 185 GRIDAALNDSLLVGYILKSTNLPLKAGSP 213 >ref|YP_004751936.1| putative amino acid ABC transporter periplasmic-binding protein [Collimonas fungivorans Ter331] gb|AEK61113.1| putative amino acid ABC transporter, periplasmic-binding protein [Collimonas fungivorans Ter331] Length = 267 Score = 347 bits (889), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 174/213 (81%), Positives = 190/213 (89%), Gaps = 3/213 (1%) Query: 4 TSFRKLSPLLAGLLLAASVSATVGAHAADLLDTVKARGTLKVALEGNYPPFNFKDPKTSE 63 T+ KLS + A +L+A T+ A AADLLDTVK RGTLKVA+EGNYPPFNFKDPK+ E Sbjct: 3 TTLSKLSKIAAAVLIAG---VTLNAFAADLLDTVKTRGTLKVAMEGNYPPFNFKDPKSGE 59 Query: 64 LTGFEVDVAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSD 123 LTGFEVDVAKLLAA+LG+KPEFTTTEWSGILAGLGAGKYDVI+NQVGIT+ RQKAFDFS Sbjct: 60 LTGFEVDVAKLLAAKLGVKPEFTTTEWSGILAGLGAGKYDVILNQVGITEARQKAFDFSQ 119 Query: 124 PYTLSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKSVPGIDVKTYPGSPEYL 183 PYTLS+AQLIVRKDEKR F +LE LKG KLGLGQGTNFEQKAK+V GIDVKTYPGSPEYL Sbjct: 120 PYTLSTAQLIVRKDEKRSFPTLESLKGYKLGLGQGTNFEQKAKAVAGIDVKTYPGSPEYL 179 Query: 184 SDLASGRIDAALNDSLLVGYLLKSSNLPLKGGS 216 +DLASGRIDAALND LLVGYLLKSSNLPLK G+ Sbjct: 180 ADLASGRIDAALNDRLLVGYLLKSSNLPLKAGA 212 >ref|ZP_08275610.1| putative amino acid ABC transporter, periplasmic-binding protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30921.1| putative amino acid ABC transporter, periplasmic-binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 268 Score = 313 bits (803), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 149/211 (70%), Positives = 183/211 (86%), Gaps = 3/211 (1%) Query: 7 RKLSPLLAGLLLAASVSATVGAHAADLLDTVKARGTLKVALEGNYPPFNFKDPKTSELTG 66 +KL+ L+ LL + V V AHAADLL TV+ARGTLKV +EG YPPFNF+D T L+G Sbjct: 7 KKLAGLMTALLFSGLV---VPAHAADLLATVQARGTLKVGVEGTYPPFNFRDTTTRALSG 63 Query: 67 FEVDVAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYT 126 FE+DVA+LLAA++GLKPEFTT EWSGILAGL AGKYDVI+NQVGIT +R+ +FDFSDPYT Sbjct: 64 FEIDVARLLAAKMGLKPEFTTIEWSGILAGLSAGKYDVILNQVGITPQREASFDFSDPYT 123 Query: 127 LSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKSVPGIDVKTYPGSPEYLSDL 186 SSAQLIVRK+E+R+F SL+DLKGKKLG+GQGTN+E++AK+V G+DVK+YPG+PEYL DL Sbjct: 124 RSSAQLIVRKNEQRQFTSLDDLKGKKLGVGQGTNYEERAKAVAGVDVKSYPGAPEYLQDL 183 Query: 187 ASGRIDAALNDSLLVGYLLKSSNLPLKGGSP 217 A+GR+DAALNDSL+V YLLK+S LP+K G+P Sbjct: 184 AAGRVDAALNDSLMVSYLLKASPLPIKAGAP 214 >ref|YP_443031.1| amino acid ABC transporter periplasmic amino acid-binding protein [Burkholderia thailandensis E264] ref|ZP_02374901.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis TXDOH] ref|ZP_02388823.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis Bt4] ref|ZP_05587522.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] gb|ABC37871.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia thailandensis E264] Length = 264 Score = 287 bits (734), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 144/216 (66%), Positives = 177/216 (81%), Gaps = 5/216 (2%) Query: 1 MAFTSFRKLSPLLAGLLLAASVSATVGAHAADLLDTVKARGTLKVALEGNYPPFNFKDPK 60 M S +KL L+AGL+ A+ V+AT AHAADLLD VK RGTL++ LEG +PPFN K+P+ Sbjct: 1 MKIASLKKL--LVAGLIGASFVAAT--AHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQ 56 Query: 61 TSELTGFEVDVAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFD 120 EL GF+VD+AK +AA+LG+KPEF TTEWSGI+AGL AGK+DVI+NQVGITD+R++ D Sbjct: 57 -GELVGFDVDIAKAIAAKLGVKPEFVTTEWSGIIAGLQAGKFDVIVNQVGITDQRKQTLD 115 Query: 121 FSDPYTLSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKSVPGIDVKTYPGSP 180 FS YT SSAQLI RKD+ R+FKSLEDLKGKKLG+ GTN+ AKSVPGIDVKTYPG+P Sbjct: 116 FSPAYTYSSAQLIQRKDDARQFKSLEDLKGKKLGVALGTNYMDMAKSVPGIDVKTYPGAP 175 Query: 181 EYLSDLASGRIDAALNDSLLVGYLLKSSNLPLKGGS 216 EYL DLA+GR+DAALND L++ YL K+S LPL+ G+ Sbjct: 176 EYLRDLAAGRLDAALNDRLMLAYLTKNSQLPLRPGA 211 >ref|ZP_02355796.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Burkholderia oklahomensis EO147] Length = 264 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 144/216 (66%), Positives = 176/216 (81%), Gaps = 5/216 (2%) Query: 1 MAFTSFRKLSPLLAGLLLAASVSATVGAHAADLLDTVKARGTLKVALEGNYPPFNFKDPK 60 M S +KL L+ GL+ A+ V+AT AHAADLLD VK RGTL++ LEG +PPFN K+P+ Sbjct: 1 MKIASLKKL--LVTGLIGASFVAAT--AHAADLLDEVKQRGTLRIGLEGTFPPFNSKNPQ 56 Query: 61 TSELTGFEVDVAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFD 120 EL GF+VD+AK +AA+LG+KPEF TTEWSGI+AGL AGK+DVI+NQVGITD+R++ D Sbjct: 57 -GELVGFDVDIAKAIAAKLGVKPEFVTTEWSGIIAGLQAGKFDVIVNQVGITDKRRETLD 115 Query: 121 FSDPYTLSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKSVPGIDVKTYPGSP 180 FS YT SSAQLI RKD+ R+FKSLEDLKGKKLG+ GTN+ AKSVPGIDVKTYPG+P Sbjct: 116 FSPAYTFSSAQLIQRKDDTRQFKSLEDLKGKKLGVALGTNYMDMAKSVPGIDVKTYPGAP 175 Query: 181 EYLSDLASGRIDAALNDSLLVGYLLKSSNLPLKGGS 216 EYL DLA+GR+DAALND L++ YL K+S LPL+ GS Sbjct: 176 EYLRDLAAGRLDAALNDRLMLAYLTKNSQLPLRPGS 211