BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0050.p (328 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775571.1| methyl-accepting chemotaxis transmembrane pr... 430 e-118 ref|YP_004753015.1| methyl-accepting chemotaxis sensory transduc... 399 e-109 ref|YP_556893.1| methyl-accepting chemotaxis sensory transducer ... 326 3e-87 ref|YP_001894206.1| methyl-accepting chemotaxis sensory transduc... 325 5e-87 ref|ZP_06843255.1| methyl-accepting chemotaxis sensory transduce... 324 1e-86 >ref|YP_003775571.1| methyl-accepting chemotaxis transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63663.1| methyl-accepting chemotaxis transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 603 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 215/316 (68%), Positives = 268/316 (84%) Query: 1 MKTLKAKLLLALVVMWIGLLVLAAWSALNTRQNMINEREAGLKRVVETAEGILKSYAAEV 60 MK+LKA+LL ALVVMW GLL+LAAWSA + R+NMI+ER+ GL+RVVE A G++KSY A+V Sbjct: 1 MKSLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVADV 60 Query: 61 AAGKTSLADAQKQALERIAAMRYDNDNYIFVFDSKPVVLMHPTNKSVVGKNVGDRKDSDG 120 AAG+ S +AQK ALERIAAMRYD DNY+F+FDS+PVVLM P+NK++VGKNV DRKDS+G Sbjct: 61 AAGRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEG 120 Query: 121 KLYYVEMVKVGKAQQRGYVNYMGRLPGADDTNRTQKVSYLIYYQPWDWLLVSGVFLNDVE 180 K YYVEM+KVG+ +Q G+V YMGRLPG DD+NRT K+SY+++ Q WDW +V+GVFL+DV+ Sbjct: 121 KAYYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQ 180 Query: 181 SDFYKNLLKLAGILVVIGVAVSAMMLAIIRNITRSLGGEPAYAVGVASRIASGDLTMAIK 240 + F +L +L GIL+V+GV VS MMLAIIR IT SLGGEPAYAV +A+RIA+GDLT+ ++ Sbjct: 181 AQFRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQ 240 Query: 241 TRAGDKTSLLYEMSVMRERLSSVIGGIRAGTDSIDTGAKEIAAGNMDLSSRTEQQAASLE 300 TR GD SLLY M+ MRERL+ VI GIR GTD+ID GA+EIAAGN+DLSSRTE+QA SL Sbjct: 241 TRPGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLA 300 Query: 301 ETASSMEELTSTVKQN 316 TAS+M+ LT+TVKQN Sbjct: 301 TTASNMDGLTATVKQN 316 >ref|YP_004753015.1| methyl-accepting chemotaxis sensory transducer [Collimonas fungivorans Ter331] gb|AEK62192.1| methyl-accepting chemotaxis sensory transducer [Collimonas fungivorans Ter331] Length = 593 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 203/314 (64%), Positives = 253/314 (80%), Gaps = 1/314 (0%) Query: 3 TLKAKLLLALVVMWIGLLVLAAWSALNTRQNMINEREAGLKRVVETAEGILKSYAAEVAA 62 +LKAKL L L VMW+GLL+LA WSALNTR M+ EREAGLK VVETA GI+K YA +VAA Sbjct: 5 SLKAKLWLVLAVMWLGLLLLAGWSALNTRDTMMKEREAGLKNVVETAAGIVKGYADDVAA 64 Query: 63 GKTSLADAQKQALERIAAMRYDNDNYIFVFDSKPVVLMHPTNKSVVGKNVGDRKDSDGKL 122 + SLADAQ QAL+RI++MRY DNY+FVFDS+PVVLMHPT+K +V KNVG+RKD+DGKL Sbjct: 65 SRLSLADAQSQALQRISSMRYAQDNYVFVFDSRPVVLMHPTSKDIVNKNVGERKDTDGKL 124 Query: 123 YYVEMVKVGKAQQRGYVNYMGRLPGADDTNRTQKVSYLIYYQPWDWLLVSGVFLNDVESD 182 YYVEMVK+GK QQ+G V+YMGRLPG DT R +K+S + Y+ PWDW LVSGVF+NDV++ Sbjct: 125 YYVEMVKLGKQQQQGIVHYMGRLPGTADT-RAEKISQVNYFAPWDWFLVSGVFVNDVQAA 183 Query: 183 FYKNLLKLAGILVVIGVAVSAMMLAIIRNITRSLGGEPAYAVGVASRIASGDLTMAIKTR 242 FY NLLK I+ VIG VSA ML IIR++TRSLGGEP+YA +A+RIA G+L +A+ Sbjct: 184 FYDNLLKQLLIMFVIGATVSATMLLIIRSVTRSLGGEPSYAAAIAARIAGGELDLAVLVD 243 Query: 243 AGDKTSLLYEMSVMRERLSSVIGGIRAGTDSIDTGAKEIAAGNMDLSSRTEQQAASLEET 302 DK+SLL+ M M+ +L++ I IR GT +I KEI+AGN DLS+RTEQQAASL++T Sbjct: 244 GKDKSSLLHAMRQMQLQLAAAITEIREGTHNIGASIKEISAGNSDLSARTEQQAASLQQT 303 Query: 303 ASSMEELTSTVKQN 316 A+SME+LT+TV+QN Sbjct: 304 AASMEQLTATVRQN 317 >ref|YP_556893.1| methyl-accepting chemotaxis sensory transducer [Burkholderia xenovorans LB400] gb|ABE28841.1| methyl-accepting chemotaxis sensory transducer [Burkholderia xenovorans LB400] Length = 611 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 161/314 (51%), Positives = 217/314 (69%), Gaps = 2/314 (0%) Query: 3 TLKAKLLLALVVMWIGLLVLAAWSALNTRQNMINEREAGLKRVVETAEGILKSYAAEVAA 62 +L KL L+L ++W+GLL + WSA+ TR M+ ER+AG+ +V+ A+GI+ Y A + Sbjct: 2 SLNRKLWLSLALVWLGLLGVGVWSAVETRGTMLAERKAGMVNLVDAAQGIVSGYYALSQS 61 Query: 63 GKTSLADAQKQALERIAAMRYDNDNYIFVFDSKPVVLMHPTNKSVVGKNVGDRKDSDGKL 122 G+ S ADAQ++AL R+AAMRY Y+FV DSKPVVLMHPT + GK VGD KD DGKL Sbjct: 62 GRMSEADAQREALARLAAMRYGESGYLFVMDSKPVVLMHPTLPQMTGKAVGDFKDPDGKL 121 Query: 123 YYVEMVKVGKAQQRGYVNYMGRLPGADDTNRTQKVSYLIYYQPWDWLLVSGVFLNDVESD 182 YV +V KA RG+ Y GRLP ++ K+SY++ + PWDW + SGVF+ D+++ Sbjct: 122 LYVAIVDAAKASGRGFAQYRGRLPHSETA--VPKLSYVVRFAPWDWNITSGVFIKDIDTA 179 Query: 183 FYKNLLKLAGILVVIGVAVSAMMLAIIRNITRSLGGEPAYAVGVASRIASGDLTMAIKTR 242 +Y+ LL +++VIG +S ML IIRN+ SLGGEP A +A+ IA GDLT ++ R Sbjct: 180 YYETLLGHLAVVLVIGAVISLAMLLIIRNVRASLGGEPGQAARLAASIAQGDLTQVVEVR 239 Query: 243 AGDKTSLLYEMSVMRERLSSVIGGIRAGTDSIDTGAKEIAAGNMDLSSRTEQQAASLEET 302 DKTS++ M+ M+ RL IG IR +SI + ++IAAGN DLS RTEQQAASL+ET Sbjct: 240 PHDKTSMMAAMNEMQNRLQRTIGEIRRSAESIASATQQIAAGNSDLSQRTEQQAASLQET 299 Query: 303 ASSMEELTSTVKQN 316 A+SMEELT+TVKQN Sbjct: 300 AASMEELTATVKQN 313 >ref|YP_001894206.1| methyl-accepting chemotaxis sensory transducer [Burkholderia phytofirmans PsJN] gb|ACD14982.1| methyl-accepting chemotaxis sensory transducer [Burkholderia phytofirmans PsJN] Length = 627 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 161/314 (51%), Positives = 215/314 (68%), Gaps = 2/314 (0%) Query: 3 TLKAKLLLALVVMWIGLLVLAAWSALNTRQNMINEREAGLKRVVETAEGILKSYAAEVAA 62 +L KL L+L ++W+GLL + WSA+ TR M+ ER+AG+ +V+ A+G++ Y A + Sbjct: 5 SLNRKLWLSLALVWLGLLGVGLWSAVETRSTMLAERKAGMVNLVDAAQGVVNGYYALAQS 64 Query: 63 GKTSLADAQKQALERIAAMRYDNDNYIFVFDSKPVVLMHPTNKSVVGKNVGDRKDSDGKL 122 GK S ADAQ++AL R+A MRY Y+FV DSKPVVLMHPT + GK VGD KD DGKL Sbjct: 65 GKLSEADAQREALARLATMRYGESGYLFVMDSKPVVLMHPTLPQMTGKPVGDFKDPDGKL 124 Query: 123 YYVEMVKVGKAQQRGYVNYMGRLPGADDTNRTQKVSYLIYYQPWDWLLVSGVFLNDVESD 182 YV +V KA RG+ Y GRLP ++ K+SY++ + PWDW + SGVF+ D+++ Sbjct: 125 LYVAIVDAAKATGRGFAEYRGRLPHSETA--VPKISYVVRFAPWDWNITSGVFIKDIDTV 182 Query: 183 FYKNLLKLAGILVVIGVAVSAMMLAIIRNITRSLGGEPAYAVGVASRIASGDLTMAIKTR 242 +Y+ LL +++VIG +S ML IIRN+ SLGGEP A +A+ IA GDLT A+ R Sbjct: 183 YYETLLGHLAVVLVIGAIISLAMLLIIRNVRASLGGEPDQAARLAASIAQGDLTQAVDVR 242 Query: 243 AGDKTSLLYEMSVMRERLSSVIGGIRAGTDSIDTGAKEIAAGNMDLSSRTEQQAASLEET 302 DKTS++ M M+ RL IG IR +SI + ++IAAGN DLS RTEQQAASL+ET Sbjct: 243 PQDKTSMMAAMHDMQNRLQQTIGEIRRSAESIASATQQIAAGNGDLSQRTEQQAASLQET 302 Query: 303 ASSMEELTSTVKQN 316 A+SMEELT+TVKQN Sbjct: 303 AASMEELTATVKQN 316 >ref|ZP_06843255.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Burkholderia sp. Ch1-1] gb|EFG69220.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Burkholderia sp. Ch1-1] Length = 627 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 160/314 (50%), Positives = 216/314 (68%), Gaps = 2/314 (0%) Query: 3 TLKAKLLLALVVMWIGLLVLAAWSALNTRQNMINEREAGLKRVVETAEGILKSYAAEVAA 62 +L KL L+L ++W+GLL + WSA+ TR M+ ER+AG+ +V+ A+GI+ Y A + Sbjct: 5 SLNRKLWLSLALVWLGLLGVGLWSAVETRSTMLAERKAGMVNLVDAAQGIVSGYYALSQS 64 Query: 63 GKTSLADAQKQALERIAAMRYDNDNYIFVFDSKPVVLMHPTNKSVVGKNVGDRKDSDGKL 122 G+ S AD Q++AL R+AAMRY Y+FV DSKPVVLMHPT + GK VGD KD DGKL Sbjct: 65 GRMSEADVQREALARLAAMRYGESGYLFVMDSKPVVLMHPTLPQMTGKAVGDFKDPDGKL 124 Query: 123 YYVEMVKVGKAQQRGYVNYMGRLPGADDTNRTQKVSYLIYYQPWDWLLVSGVFLNDVESD 182 YV +V KA RG+ Y GRLP ++ K+SY++++ PWDW + SGVF+ D+++ Sbjct: 125 LYVAIVDAAKASGRGFAQYRGRLPHSETA--VPKLSYVVHFAPWDWNITSGVFIKDIDTV 182 Query: 183 FYKNLLKLAGILVVIGVAVSAMMLAIIRNITRSLGGEPAYAVGVASRIASGDLTMAIKTR 242 +Y+ LL +++VIG +S ML IIRN+ SLGGEP A +A+ IA GDLT + R Sbjct: 183 YYETLLGHLAVVLVIGAIISLAMLLIIRNVRASLGGEPGQAARLAASIAQGDLTQVVDVR 242 Query: 243 AGDKTSLLYEMSVMRERLSSVIGGIRAGTDSIDTGAKEIAAGNMDLSSRTEQQAASLEET 302 DKTS++ M+ M+ RL IG IR +SI + ++IAAGN DLS RTEQQAASL+ET Sbjct: 243 PHDKTSMMAAMNDMQNRLQRTIGEIRRSAESIASATQQIAAGNSDLSQRTEQQAASLQET 302 Query: 303 ASSMEELTSTVKQN 316 A+SMEELT+TVKQN Sbjct: 303 AASMEELTATVKQN 316