BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0047.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001099626.1| putative chromosome segregation ATPases [Her... 292 4e-77 emb|CAL61499.2| Chromosome segregation protein SMC [Herminiimona... 291 4e-77 ref|YP_004751947.1| chromosome partition protein [Collimonas fun... 285 3e-75 ref|YP_001353757.1| chromosome segregation protein [Janthinobact... 283 2e-74 ref|YP_003775572.1| chromosome segregation SMC ATPase [Herbaspir... 278 6e-73 >ref|YP_001099626.1| putative chromosome segregation ATPases [Herminiimonas arsenicoxydans] Length = 1132 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 156/195 (80%), Positives = 173/195 (88%), Gaps = 2/195 (1%) Query: 1 MLAEEAKSRAVRADAAMTGAAQRLQELRQRVAGLTQAVHSLQIEVMKLSEVQERFNQRST 60 MLA+EAKSR+VRA++A+T A QRLQE+RQRV LTQAVH LQI+VMKLSEVQERFNQRST Sbjct: 636 MLADEAKSRSVRAESALTQATQRLQEIRQRVNTLTQAVHGLQIDVMKLSEVQERFNQRST 695 Query: 61 QIVADLAEIEMQEVEQQQIKAESEAKFEQLDIELAELQESHENGQTDYLSKEQQLNDARL 120 QI +DL EI MQE EQQQIKAESEAKFEQLD EL ELQE HE GQTDYL+KEQQLNDAR Sbjct: 696 QIASDLEEIAMQEAEQQQIKAESEAKFEQLDAELGELQEKHEEGQTDYLTKEQQLNDARQ 755 Query: 121 RLRELERAAQEAEFSEKSQRNKIDELKRSIATALEQAAQLFASMQQGSLELESLDDQAAQ 180 R+RELER AQEAE++EKSQR+KI+ELKRSIATALEQAAQLFA+MQQGSLELESLDDQAAQ Sbjct: 756 RVRELERGAQEAEYAEKSQRSKIEELKRSIATALEQAAQLFANMQQGSLELESLDDQAAQ 815 Query: 181 ARLE--LESLDDQAR 193 A L+ L+ DQ R Sbjct: 816 AGLQTLLDKRTDQER 830 >emb|CAL61499.2| Chromosome segregation protein SMC [Herminiimonas arsenicoxydans] Length = 1175 Score = 291 bits (746), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 156/195 (80%), Positives = 173/195 (88%), Gaps = 2/195 (1%) Query: 1 MLAEEAKSRAVRADAAMTGAAQRLQELRQRVAGLTQAVHSLQIEVMKLSEVQERFNQRST 60 MLA+EAKSR+VRA++A+T A QRLQE+RQRV LTQAVH LQI+VMKLSEVQERFNQRST Sbjct: 679 MLADEAKSRSVRAESALTQATQRLQEIRQRVNTLTQAVHGLQIDVMKLSEVQERFNQRST 738 Query: 61 QIVADLAEIEMQEVEQQQIKAESEAKFEQLDIELAELQESHENGQTDYLSKEQQLNDARL 120 QI +DL EI MQE EQQQIKAESEAKFEQLD EL ELQE HE GQTDYL+KEQQLNDAR Sbjct: 739 QIASDLEEIAMQEAEQQQIKAESEAKFEQLDAELGELQEKHEEGQTDYLTKEQQLNDARQ 798 Query: 121 RLRELERAAQEAEFSEKSQRNKIDELKRSIATALEQAAQLFASMQQGSLELESLDDQAAQ 180 R+RELER AQEAE++EKSQR+KI+ELKRSIATALEQAAQLFA+MQQGSLELESLDDQAAQ Sbjct: 799 RVRELERGAQEAEYAEKSQRSKIEELKRSIATALEQAAQLFANMQQGSLELESLDDQAAQ 858 Query: 181 ARLE--LESLDDQAR 193 A L+ L+ DQ R Sbjct: 859 AGLQTLLDKRTDQER 873 >ref|YP_004751947.1| chromosome partition protein [Collimonas fungivorans Ter331] gb|AEK61124.1| Chromosome partition protein [Collimonas fungivorans Ter331] Length = 1133 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 149/184 (80%), Positives = 168/184 (91%) Query: 1 MLAEEAKSRAVRADAAMTGAAQRLQELRQRVAGLTQAVHSLQIEVMKLSEVQERFNQRST 60 MLA+EA+SR+VRA+AA++ A QRLQE+R R AGLTQAVH LQI+VMKLSE+QERFNQRS+ Sbjct: 637 MLADEARSRSVRAEAALSQATQRLQEMRLRHAGLTQAVHGLQIDVMKLSELQERFNQRSS 696 Query: 61 QIVADLAEIEMQEVEQQQIKAESEAKFEQLDIELAELQESHENGQTDYLSKEQQLNDARL 120 QI ADLAEI QE EQQQ+K ESEAKFEQLD+ELAELQE HE+GQTD+L KEQQLN+AR Sbjct: 697 QIAADLAEIAAQESEQQQVKMESEAKFEQLDMELAELQEKHEDGQTDFLGKEQQLNEARQ 756 Query: 121 RLRELERAAQEAEFSEKSQRNKIDELKRSIATALEQAAQLFASMQQGSLELESLDDQAAQ 180 RLRE+ERAAQEAEFSEKS RNKI+ELKRSIATALEQAAQLFA+MQQG LELESLDDQAAQ Sbjct: 757 RLREMERAAQEAEFSEKSHRNKIEELKRSIATALEQAAQLFANMQQGHLELESLDDQAAQ 816 Query: 181 ARLE 184 A L+ Sbjct: 817 AGLQ 820 >ref|YP_001353757.1| chromosome segregation protein [Janthinobacterium sp. Marseille] gb|ABR88389.1| chromosome segregation protein [Janthinobacterium sp. Marseille] Length = 1175 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 147/184 (79%), Positives = 165/184 (89%) Query: 1 MLAEEAKSRAVRADAAMTGAAQRLQELRQRVAGLTQAVHSLQIEVMKLSEVQERFNQRST 60 MLA+EAKSR++R+++A+T A QRLQE+R RV LTQAVH LQI+VMKLSEVQERFNQRST Sbjct: 679 MLADEAKSRSIRSESAVTQATQRLQEIRLRVNTLTQAVHGLQIDVMKLSEVQERFNQRST 738 Query: 61 QIVADLAEIEMQEVEQQQIKAESEAKFEQLDIELAELQESHENGQTDYLSKEQQLNDARL 120 QI DL EI MQE EQQQ+KAESEAKFEQLD +L ELQE+HE GQTDYL+KEQQLNDAR Sbjct: 739 QIATDLEEIAMQEAEQQQVKAESEAKFEQLDADLGELQETHEEGQTDYLNKEQQLNDARQ 798 Query: 121 RLRELERAAQEAEFSEKSQRNKIDELKRSIATALEQAAQLFASMQQGSLELESLDDQAAQ 180 R R+LERAAQE F+EKSQRNKI+ELKRSIATALEQAAQLFA+MQQGSLELESLDDQAAQ Sbjct: 799 RARDLERAAQETAFAEKSQRNKIEELKRSIATALEQAAQLFANMQQGSLELESLDDQAAQ 858 Query: 181 ARLE 184 A L+ Sbjct: 859 AGLQ 862 >ref|YP_003775572.1| chromosome segregation SMC ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63664.1| chromosome segregation SMC ATPase protein [Herbaspirillum seropedicae SmR1] Length = 1176 Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 157/189 (83%), Positives = 170/189 (89%), Gaps = 1/189 (0%) Query: 1 MLAEEAKSRAVRADAAMTGAAQRLQELRQRVAGLTQAVHSLQIEVMKLSEVQERFNQRST 60 MLAEEAK RAVRA+AA+ A+QRLQELRQRV LTQ+ HSLQIEVMKL+EVQERFNQRST Sbjct: 680 MLAEEAKGRAVRAEAALLAASQRLQELRQRVNSLTQSAHSLQIEVMKLAEVQERFNQRST 739 Query: 61 QIVADLAEIEMQEVEQQQIKAESEAKFEQLDIELAELQESHENGQTDYLSKEQQLNDARL 120 QI DL EI MQE EQQQ++AESEA+FE+LDIELAELQE HENGQTDYL+KEQQLNDAR Sbjct: 740 QIATDLEEISMQEAEQQQVQAESEARFEELDIELAELQEQHENGQTDYLNKEQQLNDART 799 Query: 121 RLRELERAAQEAEFSEKSQRNKIDELKRSIATALEQAAQLFASMQQGSLELESLDDQAAQ 180 RLRELERAAQE EF+EKS RNKI+ELKR IATALEQAAQLFASMQQGSLELESLDDQAAQ Sbjct: 800 RLRELERAAQETEFAEKSHRNKIEELKRGIATALEQAAQLFASMQQGSLELESLDDQAAQ 859 Query: 181 ARLELESLD 189 A L+ E LD Sbjct: 860 AGLQ-ELLD 867