BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0025.p (186 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751989.1| ribosome recycling factor [Collimonas fungiv... 328 2e-88 ref|YP_001353745.1| ribosome recycling factor [Janthinobacterium... 322 1e-86 ref|YP_001099638.1| ribosome recycling factor [Herminiimonas ars... 320 4e-86 ref|YP_003775588.1| ribosome recycling factor [Herbaspirillum se... 318 3e-85 ref|ZP_08275644.1| Ribosome recycling factor [Oxalobacteraceae b... 318 3e-85 >ref|YP_004751989.1| ribosome recycling factor [Collimonas fungivorans Ter331] gb|AEK61166.1| Ribosome recycling factor [Collimonas fungivorans Ter331] Length = 186 Score = 328 bits (841), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 157/186 (84%), Positives = 178/186 (95%) Query: 1 MTIADVKKSTEQKMSKSIESLRADLAKVRTGRAHTGILDHVQVDYYGSPTQLSQVANLTL 60 M+IADVKK+T+Q+M KS+E+LRADLAKVRTGRAHTGILDH+ V+YYGSPT LSQVAN+TL Sbjct: 1 MSIADVKKNTDQRMQKSLETLRADLAKVRTGRAHTGILDHIMVEYYGSPTNLSQVANVTL 60 Query: 61 IDARTIGVQPFDKKMLAVIEKAIREADLGLNPATQGDLIRVPTPALTEERRKEMVKLVKG 120 IDARTIGVQPF+KKM+AV+EKAIRE+DLGLNPATQG++IRVPTP LTEERRKEMVKLVKG Sbjct: 61 IDARTIGVQPFEKKMVAVVEKAIRESDLGLNPATQGEMIRVPTPPLTEERRKEMVKLVKG 120 Query: 121 EAEDTKISIRNIRRDANEGLKKLVKDKVCSEDDERRGQEDIQKLTDKFVAEVDKLVVEKE 180 EAED KI+IRNIRRDANEGLKKLVKDK CSEDDERR Q+DIQKLTDKFVAE+DK V++KE Sbjct: 121 EAEDAKIAIRNIRRDANEGLKKLVKDKECSEDDERRAQDDIQKLTDKFVAEIDKQVIDKE 180 Query: 181 KEVLTV 186 KE+LTV Sbjct: 181 KEILTV 186 >ref|YP_001353745.1| ribosome recycling factor [Janthinobacterium sp. Marseille] sp|A6SZP8.1|RRF_JANMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor gb|ABR89027.1| ribosome recycling factor [Janthinobacterium sp. Marseille] Length = 186 Score = 322 bits (826), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 155/186 (83%), Positives = 174/186 (93%) Query: 1 MTIADVKKSTEQKMSKSIESLRADLAKVRTGRAHTGILDHVQVDYYGSPTQLSQVANLTL 60 MT+AD KK+ +QKM KSIE+L+ADLAKVRTGRAHTGILDHV V+YYG+PT LSQVAN+TL Sbjct: 1 MTVADAKKTADQKMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLSQVANVTL 60 Query: 61 IDARTIGVQPFDKKMLAVIEKAIREADLGLNPATQGDLIRVPTPALTEERRKEMVKLVKG 120 IDARTIGVQPF+KKM+AV+EKAIREADLGLNPATQG+LIRVPTP LTEERRKEMVKLVK Sbjct: 61 IDARTIGVQPFEKKMVAVVEKAIREADLGLNPATQGELIRVPTPPLTEERRKEMVKLVKS 120 Query: 121 EAEDTKISIRNIRRDANEGLKKLVKDKVCSEDDERRGQEDIQKLTDKFVAEVDKLVVEKE 180 EAED KI++RNIRRDANE LKKLVK+K CSED+ERR Q++IQKLTDKFV E+DKLVVEKE Sbjct: 121 EAEDAKIAVRNIRRDANESLKKLVKEKACSEDEERRAQDEIQKLTDKFVIEIDKLVVEKE 180 Query: 181 KEVLTV 186 KEVLTV Sbjct: 181 KEVLTV 186 >ref|YP_001099638.1| ribosome recycling factor [Herminiimonas arsenicoxydans] sp|A4G4S4.1|RRF_HERAR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor emb|CAL61511.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF) [Herminiimonas arsenicoxydans] Length = 186 Score = 320 bits (821), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 155/186 (83%), Positives = 174/186 (93%) Query: 1 MTIADVKKSTEQKMSKSIESLRADLAKVRTGRAHTGILDHVQVDYYGSPTQLSQVANLTL 60 MT+AD KK+ +QKM KSIE+L+ADLAKVRTGRAHTGILDHV V+YYG+PT L+QVAN+TL Sbjct: 1 MTVADAKKTADQKMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLTQVANVTL 60 Query: 61 IDARTIGVQPFDKKMLAVIEKAIREADLGLNPATQGDLIRVPTPALTEERRKEMVKLVKG 120 IDARTIGVQPF+KKM+AV+EKAIR+ADLGLNPATQG++IRVPTP LTEERRKEMVKLVK Sbjct: 61 IDARTIGVQPFEKKMVAVVEKAIRDADLGLNPATQGEMIRVPTPPLTEERRKEMVKLVKS 120 Query: 121 EAEDTKISIRNIRRDANEGLKKLVKDKVCSEDDERRGQEDIQKLTDKFVAEVDKLVVEKE 180 EAED KI+IRNIRRDANE LKKL+KDK CSEDDERR Q++IQKLTDKFV EVDKLVVEKE Sbjct: 121 EAEDAKIAIRNIRRDANETLKKLLKDKACSEDDERRAQDEIQKLTDKFVLEVDKLVVEKE 180 Query: 181 KEVLTV 186 KEVLTV Sbjct: 181 KEVLTV 186 >ref|YP_003775588.1| ribosome recycling factor [Herbaspirillum seropedicae SmR1] gb|ADJ63680.1| ribosome recycling factor (ribosome releasing factor) protein [Herbaspirillum seropedicae SmR1] Length = 186 Score = 318 bits (814), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 153/186 (82%), Positives = 175/186 (94%) Query: 1 MTIADVKKSTEQKMSKSIESLRADLAKVRTGRAHTGILDHVQVDYYGSPTQLSQVANLTL 60 M++ADVKK++EQKM+KSIE+L+A+LAKVRTGRAHTG+LD V VDYYGSPT LSQVANLTL Sbjct: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 Query: 61 IDARTIGVQPFDKKMLAVIEKAIREADLGLNPATQGDLIRVPTPALTEERRKEMVKLVKG 120 IDARTIGVQP++KKM+AV+EKAIREADLGLNPAT G+LIRVP P LTEERRKEMVKLVKG Sbjct: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 Query: 121 EAEDTKISIRNIRRDANEGLKKLVKDKVCSEDDERRGQEDIQKLTDKFVAEVDKLVVEKE 180 EAED KI++RNIRR+ NE LKKLVKDKV SEDDERRGQ++IQKLTDKFVAE+DKLV +KE Sbjct: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 Query: 181 KEVLTV 186 KEV+TV Sbjct: 181 KEVMTV 186 >ref|ZP_08275644.1| Ribosome recycling factor [Oxalobacteraceae bacterium IMCC9480] gb|EGF30890.1| Ribosome recycling factor [Oxalobacteraceae bacterium IMCC9480] Length = 186 Score = 318 bits (814), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 150/186 (80%), Positives = 176/186 (94%) Query: 1 MTIADVKKSTEQKMSKSIESLRADLAKVRTGRAHTGILDHVQVDYYGSPTQLSQVANLTL 60 MTI DVKK+T+ +M KSIE+L+ DLAKVRTGRAH G+LDH+ VDYYG+PTQL+QVAN+TL Sbjct: 1 MTIVDVKKNTDVRMHKSIETLKTDLAKVRTGRAHVGMLDHIMVDYYGNPTQLTQVANVTL 60 Query: 61 IDARTIGVQPFDKKMLAVIEKAIREADLGLNPATQGDLIRVPTPALTEERRKEMVKLVKG 120 +DART+GVQP++KKM++V+EKAIR+ADLGLNP+TQGDLIRVPTPALTEERRKEMVKLVK Sbjct: 61 VDARTLGVQPWEKKMVSVVEKAIRDADLGLNPSTQGDLIRVPTPALTEERRKEMVKLVKS 120 Query: 121 EAEDTKISIRNIRRDANEGLKKLVKDKVCSEDDERRGQEDIQKLTDKFVAEVDKLVVEKE 180 EAED KI+IRNIRRDANEGLKKL+KDK CSEDDERR Q++IQK+TDKFVAE+DKLVV+KE Sbjct: 121 EAEDAKIAIRNIRRDANEGLKKLIKDKECSEDDERRAQDEIQKMTDKFVAEIDKLVVDKE 180 Query: 181 KEVLTV 186 KEVLTV Sbjct: 181 KEVLTV 186