BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0007.p (413 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004752612.1| ATP-dependent RNA helicase DbpA [Collimonas ... 595 e-168 emb|CAL61847.2| ATP-dependent RNA helicase [Herminiimonas arseni... 583 e-164 ref|YP_001099972.1| ATP-dependent RNA helicase DbpA [Herminiimon... 582 e-164 ref|YP_001353634.1| ATP-dependent RNA helicase DbpA [Janthinobac... 577 e-162 ref|ZP_08273973.1| ATP-dependent RNA helicase DbpA [Oxalobactera... 566 e-159 >ref|YP_004752612.1| ATP-dependent RNA helicase DbpA [Collimonas fungivorans Ter331] gb|AEK61789.1| ATP-dependent RNA helicase DbpA [Collimonas fungivorans Ter331] Length = 459 Score = 595 bits (1534), Expect = e-168, Method: Compositional matrix adjust. Identities = 296/387 (76%), Positives = 327/387 (84%), Gaps = 11/387 (2%) Query: 1 MTSSSFSSLPLTPAMLANLEQLGYHEMTTIQAASLPAALEGRDLIAQAKTGSGKTAAFGI 60 M +SSFS+LPL PA+L+NL+ LGYHEMTTIQA SLP LE RDLIAQAKTGSGKTAAFGI Sbjct: 1 MKTSSFSTLPLAPALLSNLDSLGYHEMTTIQAQSLPVILERRDLIAQAKTGSGKTAAFGI 60 Query: 61 GMLHKLNPSYFAIQGLVICPTRELADQVSNELRRLARFTDNIKILTLCGGTAMRPQIASL 120 G+LHKLNPSYFAIQ LV+CPTRELADQV+ ELRRLARF DN+KILTLCGGT M PQI SL Sbjct: 61 GILHKLNPSYFAIQALVLCPTRELADQVAKELRRLARFADNVKILTLCGGTPMGPQIGSL 120 Query: 121 EHGTHIVVGTPGRIRDHIGRGTINLATVQTLVLDEADRMVDMGFYEDIEGIVSACPARRQ 180 EHG HI+VGTPGRIRDHIGRG+INL TVQTLVLDEADRMVDMGFYE+I GIVSACPARRQ Sbjct: 121 EHGAHIIVGTPGRIRDHIGRGSINLGTVQTLVLDEADRMVDMGFYEEISGIVSACPARRQ 180 Query: 181 TLLFSATYPDDIRKASARFLRDPEEIKVEARHDGDKIEQRFFEVSAEQRNFAVARLLQHY 240 TLLFSATYPDDIRKASA FLRD E+KVEA+HD +IEQRF+EVS E RN AVA+LL HY Sbjct: 181 TLLFSATYPDDIRKASAEFLRDAVEVKVEAQHDTGRIEQRFYEVSYEGRNAAVAQLLNHY 240 Query: 241 QPVSTLAFCNTKIHCRELADELRAQGFSALALYGDLEQRERDEILVQFSNQSCSVLVATD 300 +PVST+AFCNTKIHCRELADELRAQGFSALALYG+LEQRERDEILV+F+NQSCSVLVATD Sbjct: 241 KPVSTIAFCNTKIHCRELADELRAQGFSALALYGELEQRERDEILVRFANQSCSVLVATD 300 Query: 301 VAARGLDIANLGAVINVDVTRDTEVHIHRIGRTGRGLWXKALGQADRGIPACLRAVVRSR 360 VAARGLDI LGAVINVDV++DTEVHIHR+GRTGRG DRG+ L A + Sbjct: 301 VAARGLDIQTLGAVINVDVSKDTEVHIHRVGRTGRG--------QDRGLALSLCAPNEKK 352 Query: 361 RAR--HQRRQG-LARADAYALHPGRQE 384 + +QG ++ D AL P E Sbjct: 353 WVKLIEDYQQGPVSWFDLAALEPAAGE 379 >emb|CAL61847.2| ATP-dependent RNA helicase [Herminiimonas arsenicoxydans] Length = 464 Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust. Identities = 281/336 (83%), Positives = 305/336 (90%) Query: 1 MTSSSFSSLPLTPAMLANLEQLGYHEMTTIQAASLPAALEGRDLIAQAKTGSGKTAAFGI 60 M SSF++L L+P ML+NL+ LGY EMT+IQA SLP L+ RDLIAQAKTGSGKTAAFGI Sbjct: 1 MNPSSFAALALSPPMLSNLDALGYREMTSIQAQSLPVILQLRDLIAQAKTGSGKTAAFGI 60 Query: 61 GMLHKLNPSYFAIQGLVICPTRELADQVSNELRRLARFTDNIKILTLCGGTAMRPQIASL 120 GML KLNP++FAIQGLVICPTRELADQVSNELRRLARF DNIKILTLCGG MRPQIASL Sbjct: 61 GMLQKLNPTWFAIQGLVICPTRELADQVSNELRRLARFADNIKILTLCGGAPMRPQIASL 120 Query: 121 EHGTHIVVGTPGRIRDHIGRGTINLATVQTLVLDEADRMVDMGFYEDIEGIVSACPARRQ 180 EHG HIVVGTPGR+RDHI R TINL+TVQTLVLDEADRMVDMGFYE+I GIVSACP RRQ Sbjct: 121 EHGAHIVVGTPGRLRDHISRNTINLSTVQTLVLDEADRMVDMGFYEEIAGIVSACPERRQ 180 Query: 181 TLLFSATYPDDIRKASARFLRDPEEIKVEARHDGDKIEQRFFEVSAEQRNFAVARLLQHY 240 TLLFSATYPDDIRKASA FLRDP E+KVEA+HD +IEQRF+EV + RN AVA LL+HY Sbjct: 181 TLLFSATYPDDIRKASAEFLRDPVEVKVEAQHDDSQIEQRFYEVGYDDRNAAVATLLKHY 240 Query: 241 QPVSTLAFCNTKIHCRELADELRAQGFSALALYGDLEQRERDEILVQFSNQSCSVLVATD 300 +PVSTLAFCNTKIHCRELA ELRAQGFSALALYG+LEQRERDEILV F+NQSCSVLVATD Sbjct: 241 RPVSTLAFCNTKIHCRELAAELRAQGFSALALYGELEQRERDEILVLFANQSCSVLVATD 300 Query: 301 VAARGLDIANLGAVINVDVTRDTEVHIHRIGRTGRG 336 VAARGLDI +LGAVINVDV++DTEVHIHRIGRTGRG Sbjct: 301 VAARGLDIQSLGAVINVDVSKDTEVHIHRIGRTGRG 336 >ref|YP_001099972.1| ATP-dependent RNA helicase DbpA [Herminiimonas arsenicoxydans] Length = 506 Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust. Identities = 281/336 (83%), Positives = 305/336 (90%) Query: 1 MTSSSFSSLPLTPAMLANLEQLGYHEMTTIQAASLPAALEGRDLIAQAKTGSGKTAAFGI 60 M SSF++L L+P ML+NL+ LGY EMT+IQA SLP L+ RDLIAQAKTGSGKTAAFGI Sbjct: 43 MNPSSFAALALSPPMLSNLDALGYREMTSIQAQSLPVILQLRDLIAQAKTGSGKTAAFGI 102 Query: 61 GMLHKLNPSYFAIQGLVICPTRELADQVSNELRRLARFTDNIKILTLCGGTAMRPQIASL 120 GML KLNP++FAIQGLVICPTRELADQVSNELRRLARF DNIKILTLCGG MRPQIASL Sbjct: 103 GMLQKLNPTWFAIQGLVICPTRELADQVSNELRRLARFADNIKILTLCGGAPMRPQIASL 162 Query: 121 EHGTHIVVGTPGRIRDHIGRGTINLATVQTLVLDEADRMVDMGFYEDIEGIVSACPARRQ 180 EHG HIVVGTPGR+RDHI R TINL+TVQTLVLDEADRMVDMGFYE+I GIVSACP RRQ Sbjct: 163 EHGAHIVVGTPGRLRDHISRNTINLSTVQTLVLDEADRMVDMGFYEEIAGIVSACPERRQ 222 Query: 181 TLLFSATYPDDIRKASARFLRDPEEIKVEARHDGDKIEQRFFEVSAEQRNFAVARLLQHY 240 TLLFSATYPDDIRKASA FLRDP E+KVEA+HD +IEQRF+EV + RN AVA LL+HY Sbjct: 223 TLLFSATYPDDIRKASAEFLRDPVEVKVEAQHDDSQIEQRFYEVGYDDRNAAVATLLKHY 282 Query: 241 QPVSTLAFCNTKIHCRELADELRAQGFSALALYGDLEQRERDEILVQFSNQSCSVLVATD 300 +PVSTLAFCNTKIHCRELA ELRAQGFSALALYG+LEQRERDEILV F+NQSCSVLVATD Sbjct: 283 RPVSTLAFCNTKIHCRELAAELRAQGFSALALYGELEQRERDEILVLFANQSCSVLVATD 342 Query: 301 VAARGLDIANLGAVINVDVTRDTEVHIHRIGRTGRG 336 VAARGLDI +LGAVINVDV++DTEVHIHRIGRTGRG Sbjct: 343 VAARGLDIQSLGAVINVDVSKDTEVHIHRIGRTGRG 378 >ref|YP_001353634.1| ATP-dependent RNA helicase DbpA [Janthinobacterium sp. Marseille] gb|ABR89567.1| ATP-dependent RNA helicase [Janthinobacterium sp. Marseille] Length = 478 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 279/336 (83%), Positives = 304/336 (90%) Query: 1 MTSSSFSSLPLTPAMLANLEQLGYHEMTTIQAASLPAALEGRDLIAQAKTGSGKTAAFGI 60 MT++SFSSL L+PAML+NL+ LGY EMT IQA SLP LE RDLIAQAKTGSGKTAAFGI Sbjct: 16 MTATSFSSLALSPAMLSNLDSLGYREMTPIQAQSLPVILELRDLIAQAKTGSGKTAAFGI 75 Query: 61 GMLHKLNPSYFAIQGLVICPTRELADQVSNELRRLARFTDNIKILTLCGGTAMRPQIASL 120 G+L KLNP++FA+Q LVICPTRELADQVSNELRRLAR T+NIK+LTLCGG MRPQIASL Sbjct: 76 GLLQKLNPTWFAVQALVICPTRELADQVSNELRRLARATENIKVLTLCGGAPMRPQIASL 135 Query: 121 EHGTHIVVGTPGRIRDHIGRGTINLATVQTLVLDEADRMVDMGFYEDIEGIVSACPARRQ 180 EHG HIVVGTPGRIRDHI R TINL+ VQTLVLDEADRMVDMGFYE+I GIVSACP RRQ Sbjct: 136 EHGAHIVVGTPGRIRDHISRETINLSKVQTLVLDEADRMVDMGFYEEIAGIVSACPTRRQ 195 Query: 181 TLLFSATYPDDIRKASARFLRDPEEIKVEARHDGDKIEQRFFEVSAEQRNFAVARLLQHY 240 TLLFSATYPDDIR+ASA FLRDP EIKVEA+HD +IEQRF+ V + RN AVA LL+HY Sbjct: 196 TLLFSATYPDDIRRASAEFLRDPVEIKVEAQHDDSQIEQRFYAVDYDDRNAAVATLLKHY 255 Query: 241 QPVSTLAFCNTKIHCRELADELRAQGFSALALYGDLEQRERDEILVQFSNQSCSVLVATD 300 +PVSTLAFCNTKIHCRELA ELRAQGFSALALYG+LEQRERDEILV F+NQSCSVLVATD Sbjct: 256 RPVSTLAFCNTKIHCRELAAELRAQGFSALALYGELEQRERDEILVLFANQSCSVLVATD 315 Query: 301 VAARGLDIANLGAVINVDVTRDTEVHIHRIGRTGRG 336 VAARGLDI +LGAVINVDV++DTEVHIHRIGRTGRG Sbjct: 316 VAARGLDIQSLGAVINVDVSKDTEVHIHRIGRTGRG 351 >ref|ZP_08273973.1| ATP-dependent RNA helicase DbpA [Oxalobacteraceae bacterium IMCC9480] gb|EGF32547.1| ATP-dependent RNA helicase DbpA [Oxalobacteraceae bacterium IMCC9480] Length = 461 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 270/335 (80%), Positives = 301/335 (89%) Query: 2 TSSSFSSLPLTPAMLANLEQLGYHEMTTIQAASLPAALEGRDLIAQAKTGSGKTAAFGIG 61 T +SFS+L L+P+MLANL+ LGYHEMT IQA SLP L+ RDLIAQAKTGSGKTAAFGIG Sbjct: 4 TPNSFSTLALSPSMLANLDSLGYHEMTPIQAKSLPVILDRRDLIAQAKTGSGKTAAFGIG 63 Query: 62 MLHKLNPSYFAIQGLVICPTRELADQVSNELRRLARFTDNIKILTLCGGTAMRPQIASLE 121 +L +LNP++FAIQ LVICPTRELADQVSNELRRLARF DN KILTLCGG MRPQIASLE Sbjct: 64 ILQRLNPTWFAIQALVICPTRELADQVSNELRRLARFADNTKILTLCGGAPMRPQIASLE 123 Query: 122 HGTHIVVGTPGRIRDHIGRGTINLATVQTLVLDEADRMVDMGFYEDIEGIVSACPARRQT 181 HG HI+VGTPGR+RDHIGRG+I+L+TVQTLVLDEADRMVDMGFYE+I GIVSACP RRQT Sbjct: 124 HGAHIIVGTPGRLRDHIGRGSIDLSTVQTLVLDEADRMVDMGFYEEISGIVSACPTRRQT 183 Query: 182 LLFSATYPDDIRKASARFLRDPEEIKVEARHDGDKIEQRFFEVSAEQRNFAVARLLQHYQ 241 LLFSATYPDDIRK+SA FLRDP EI VEA+HD ++IEQRF+EV + RN AV RLL +Y+ Sbjct: 184 LLFSATYPDDIRKSSAPFLRDPTEITVEAQHDDNRIEQRFYEVGYDDRNDAVGRLLNNYK 243 Query: 242 PVSTLAFCNTKIHCRELADELRAQGFSALALYGDLEQRERDEILVQFSNQSCSVLVATDV 301 P S LAFCNTKIHCRELADELRAQGFSA+ALYG+LEQRERDEILV F+N SCSVLVATDV Sbjct: 244 PASALAFCNTKIHCRELADELRAQGFSAMALYGELEQRERDEILVLFANGSCSVLVATDV 303 Query: 302 AARGLDIANLGAVINVDVTRDTEVHIHRIGRTGRG 336 AARGLDI +L VINVDV++DTEVHIHR+GRTGRG Sbjct: 304 AARGLDIQSLEMVINVDVSKDTEVHIHRVGRTGRG 338