BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0001.p (370 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08274870.1| putative transport/efflux transmembrane prote... 462 e-128 ref|YP_004753095.1| putative transport/efflux transmembrane prot... 407 e-111 emb|CCA86430.1| putative transport/efflux transmembrane protein ... 344 2e-92 ref|YP_584091.1| cation/multidrug efflux system, mebrane-fusion ... 342 6e-92 ref|YP_725970.1| cation/multidrug efflux system, mebrane-fusion ... 341 1e-91 >ref|ZP_08274870.1| putative transport/efflux transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31658.1| putative transport/efflux transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 383 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 228/345 (66%), Positives = 278/345 (80%) Query: 6 ALCLAVSALAACSKKVEKVEEIRPVRAMVIAAGNADVVAEFPGEVRARVESRLGFRVGGK 65 A+ L ++ LAACSK VEK E+IRPVRAM +A +A+ AEF G+VR R+ESRLGFRVGGK Sbjct: 17 AVVLTLALLAACSKPVEKTEDIRPVRAMTLAPADAEAKAEFSGDVRPRIESRLGFRVGGK 76 Query: 66 IVARKVDVGSIVRRGQVLMQLDPQDLQLAQRQADAAMKSALSNRDLASAELKRYQELRDK 125 IVARKV+VGS+V+RGQVLMQLDPQDLQLAQ Q AA+K+A SNRDLA AE +RY+ELR + Sbjct: 77 IVARKVEVGSLVKRGQVLMQLDPQDLQLAQLQTAAALKAAQSNRDLARAEQQRYEELRAR 136 Query: 126 NFVSQATLDSKQTAYQSALSGYDQAVASLRNQSNQTGYAVLTADVDGVVTAVDAEAGQVV 185 NFVSQA LD+KQTA+Q+A + +DQA A+ RNQSNQTGYA L ADVDGVVT +DAE GQVV Sbjct: 137 NFVSQAVLDAKQTAFQAAQASFDQATAAARNQSNQTGYATLVADVDGVVTGIDAETGQVV 196 Query: 186 AAGTPVVSVAQAGDKDVVIGIPEDKVDVLRRSADVRVRLWANPKETIVGKIREVSPIADA 245 AAGTPVV VAQ +KDVVIGIPED+VD+LR+ D+RV +WA+P I GK+RE+SP+AD Sbjct: 197 AAGTPVVRVAQTREKDVVIGIPEDQVDLLRQVTDIRVHVWADPGTIIEGKLRELSPMADP 256 Query: 246 ATRTYTFKIALPDSAKDVRLGMTAYVAFAGKTSGEMIRLPLTALYPVDGKTSVWLVENGA 305 +RT+T +IALP A VRLGMTAYV F + MIR+PL AL T+VW++E G Sbjct: 257 VSRTFTARIALPAGATQVRLGMTAYVTFVSRIPQTMIRVPLNALVRDKSATAVWVIEGGV 316 Query: 306 VKVVPVQLGGQSGNDVLISAGLTAGQTVVTAGVNLLKPGQKVKIL 350 VK+VPVQ+ G +GND+L++ G+ GQT+VTAGVNLLKPGQKV IL Sbjct: 317 VKLVPVQVSGPAGNDMLLAGGVAPGQTIVTAGVNLLKPGQKVTIL 361 >ref|YP_004753095.1| putative transport/efflux transmembrane protein [Collimonas fungivorans Ter331] gb|AEK62272.1| putative transport/efflux transmembrane protein [Collimonas fungivorans Ter331] Length = 396 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 218/337 (64%), Positives = 265/337 (78%), Gaps = 3/337 (0%) Query: 17 CSKKVEKVEEIRPVRAMVIAAGNADVVAEFPGEVRARVESRLGFRVGGKIVARKVDVGSI 76 CSK EKVE+IRPVR +V+ NADV +E PG V+AR ES+LGFRV GKI+AR+VDVGS+ Sbjct: 33 CSKPPEKVEDIRPVRVVVLNPANADVTSELPGAVQARYESQLGFRVAGKIIARQVDVGSV 92 Query: 77 VRRGQVLMQLDPQDLQLAQRQADAAMKSALSNRDLASAELKRYQELRDKNFVSQATLDSK 136 V+RGQVLM+LDP+DLQLAQ QA AA+ SA SNRD A A+LKRYQ+LRDKNFVSQA LD+K Sbjct: 93 VKRGQVLMRLDPKDLQLAQAQAVAAVSSAASNRDTAKADLKRYQDLRDKNFVSQAVLDAK 152 Query: 137 QTAYQSALSGYDQAVASLRNQSNQTGYAVLTADVDGVVTAVDAEAGQVVAAGTPVVSVAQ 196 TAY++A + +DQA A+ + Q NQT YA L +DVDGVVTA++AEAGQVVAAGTPVVSVA+ Sbjct: 153 DTAYKAAQATFDQAEAAFKGQLNQTAYATLESDVDGVVTAINAEAGQVVAAGTPVVSVAR 212 Query: 197 AGDKDVVIGIPEDKVDVLRRSADVRVRLWANPKETIVGKIREVSPIADAATRTYTFKIAL 256 G K+VV+G PE++VD LR S DV+VRLWA+PK+ I G +REVSPIAD TRTY KIA+ Sbjct: 213 QGAKEVVVGAPENQVDKLRSSGDVQVRLWADPKQVIHGTVREVSPIADPVTRTYAIKIAI 272 Query: 257 PDSAKDVRLGMTAYVAFAGKTSGEMIRLPLTALYPVDGKTSVWLVENGA---VKVVPVQL 313 PD +V+LGMTAY +F KTS + I++PLTAL V ++VW+VE V+ VPVQ+ Sbjct: 273 PDDTPNVKLGMTAYASFTSKTSDDAIKVPLTALLRVQDHSAVWVVEGTTVHQVRQVPVQI 332 Query: 314 GGQSGNDVLISAGLTAGQTVVTAGVNLLKPGQKVKIL 350 GQ GN+V I L AGQ VVTAGVN LK GQKV IL Sbjct: 333 SGQHGNEVWIQGALRAGQQVVTAGVNQLKAGQKVTIL 369 >emb|CCA86430.1| putative transport/efflux transmembrane protein [Ralstonia syzygii R24] Length = 402 Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 188/355 (52%), Positives = 248/355 (69%), Gaps = 11/355 (3%) Query: 17 CSKKVEKVEEIRPVRAMVIAAGNADVVAEFPGEVRARVESRLGFRVGGKIVARKVDVGSI 76 CSK+ K E+RPVR M + + A EF G+VR R+ESRLGFRV GKI+AR VDVG+I Sbjct: 46 CSKEQPKASEVRPVRTMTVVSEQAAGTVEFSGDVRPRIESRLGFRVPGKIIARLVDVGAI 105 Query: 77 VRRGQVLMQLDPQDLQLAQRQADAAMKSALSNRDLASAELKRYQELRDKNFVSQATLDSK 136 V++GQVL +LDP DL LAQ+ A A +++A ++RDLA+A+LKR+ EL K F+S A Sbjct: 106 VKKGQVLARLDPTDLALAQQSAQAQLQAAKTDRDLAAADLKRFSELFAKGFISAAEQQRH 165 Query: 137 QTAYQSALSGYDQAVASLRNQSNQTGYAVLTADVDGVVTAVDAEAGQVVAAGTPVVSVAQ 196 Q Y +A + YDQA A RNQSNQ YA L AD DGVVT VDAE GQVV+AG PVV VAQ Sbjct: 166 QANYDAAQARYDQAAAGYRNQSNQAAYATLEADADGVVTGVDAEVGQVVSAGQPVVRVAQ 225 Query: 197 AGDKDVVIGIPEDKVDVLRRSADVRVRLWANPKETIVGKIREVSPIADAATRTYTFKIAL 256 +K+VV+GIPED+VD LR+S+DVR++LWA+P ++ GK+RE++P AD TRTYT KIA+ Sbjct: 226 TAEKEVVVGIPEDQVDALRKSSDVRIKLWADPSHSLPGKVREIAPAADPVTRTYTVKIAV 285 Query: 257 PDSAKDVRLGMTAYVAF-----AGKTSGEMIRLPLTALYPVDGKTSVWLVENGA--VKVV 309 P+ D++LGMTA F + G +R+P+TAL GK VWL ++ + VK V Sbjct: 286 PNPPPDLKLGMTAVATFVRPGGGADSGGMGVRVPITALLQEQGKNVVWLYDSASQTVKPV 345 Query: 310 PVQLGGQSGNDVLISAGLTAGQTVVTAGVNLLKPGQKVKILGAEPLAADTPDAKA 364 PV +G N +L++ GL+ GQT+VTAGV+LLK GQ+V + AAD P A++ Sbjct: 346 PVTVGAPRDNVLLVTGGLSPGQTIVTAGVHLLKAGQRVMPMA----AADQPSAQS 396 >ref|YP_584091.1| cation/multidrug efflux system, mebrane-fusion component (RND family) [Cupriavidus metallidurans CH34] gb|ABF08822.1| cation/multidrug efflux system, mebrane-fusion component (modular protein) (RND family) [Cupriavidus metallidurans CH34] Length = 523 Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 179/354 (50%), Positives = 233/354 (65%), Gaps = 9/354 (2%) Query: 5 IALCLAVSALAACSKKVEKVEEIRPVRAMVIAAGNADVVAEFPGEVRARVESRLGFRVGG 64 +AL A+ LA C K+ E VE +RPVR + + EF GEVR RVESRLGFRVGG Sbjct: 147 LALSTAL-MLAGCGKQAESVEYVRPVRLLQLNPAGGKTAFEFSGEVRPRVESRLGFRVGG 205 Query: 65 KIVARKVDVGSIVRRGQVLMQLDPQDLQLAQRQADAAMKSALSNRDLASAELKRYQELRD 124 KI AR VDVG+ VR+GQ L +LDP DL LA+ A A +A ++RDLA+++LKRY EL Sbjct: 206 KIAARLVDVGATVRKGQPLARLDPTDLGLAEAGARAQYDAAKTDRDLAASDLKRYNELAA 265 Query: 125 KNFVSQATLDSKQTAYQSALSGYDQAVASLRNQSNQTGYAVLTADVDGVVTAVDAEAGQV 184 K F+S A +Q Y SA S +QA A+LRNQ+NQTGYAVLTAD DGVVTA+D E GQV Sbjct: 266 KGFISAAEQHRRQATYDSAASKLEQAQANLRNQANQTGYAVLTADADGVVTAIDTEVGQV 325 Query: 185 VAAGTPVVSVAQAGDKDVVIGIPEDKVDVLRRSADVRVRLWANPKETIVGKIREVSPIAD 244 V G PV+ VAQ +K+V IG+PED+VD+LR +V +R W+ P + G++RE+S AD Sbjct: 326 VTPGQPVIRVAQTAEKEVAIGLPEDQVDMLRGITEVTIRTWSEPDRVLPGRVREISAAAD 385 Query: 245 AATRTYTFKIALPDSAKDVRLGMTAYVAFAGKTSGEMIRLPLTALYPVDGKTSVWLVE-- 302 TRTY ++++P+ D+R+GMTA V F IR+PLTAL +G VW+ + Sbjct: 386 TVTRTYPTRVSVPNPPADLRIGMTAVVTFVRSGDSAAIRIPLTALLQNNGSNQVWVYQPD 445 Query: 303 ------NGAVKVVPVQLGGQSGNDVLISAGLTAGQTVVTAGVNLLKPGQKVKIL 350 G V VPV LG GN + + +GL GQ +VTAGV+LL+PGQKV+ + Sbjct: 446 SGGKGTGGTVNPVPVMLGNADGNLIEVRSGLKPGQVIVTAGVHLLRPGQKVRPM 499 >ref|YP_725970.1| cation/multidrug efflux system, mebrane-fusion component [Ralstonia eutropha H16] emb|CAJ92602.1| Cation/multidrug efflux system, mebrane-fusion component [Ralstonia eutropha H16] Length = 369 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 178/340 (52%), Positives = 230/340 (67%), Gaps = 2/340 (0%) Query: 13 ALAACSKKVEKVEEIRPVRAMVIAAGNADVVAEFPGEVRARVESRLGFRVGGKIVARKVD 72 AL C KK E E+RPVR M ++ N EF G+VR RVESRLGFRVGGKI AR VD Sbjct: 6 ALTGCGKKAEPAPEVRPVRLMQLSPHNGKTAFEFSGDVRPRVESRLGFRVGGKIAARLVD 65 Query: 73 VGSIVRRGQVLMQLDPQDLQLAQRQADAAMKSALSNRDLASAELKRYQELRDKNFVSQAT 132 VG++V +GQ L +LDP DL LA+ + A ++A ++RDLA+A+LKRY +L K F+S A Sbjct: 66 VGAVVSKGQPLARLDPTDLSLAEAGSRAQFEAAKTDRDLAAADLKRYNDLFAKGFISAAE 125 Query: 133 LDSKQTAYQSALSGYDQAVASLRNQSNQTGYAVLTADVDGVVTAVDAEAGQVVAAGTPVV 192 +Q Y +A S QA A LR+QSNQTGY+VL AD DGVVTA+DAE GQVV G PVV Sbjct: 126 QHRRQANYDAAESRLRQAQAGLRSQSNQTGYSVLHADADGVVTAIDAEVGQVVTPGQPVV 185 Query: 193 SVAQAGDKDVVIGIPEDKVDVLRRSADVRVRLWANPKETIVGKIREVSPIADAATRTYTF 252 VAQ +K+V IG+PED+VD+LR DV + WA P+ T+ G++RE++ AD TRTY Sbjct: 186 RVAQTAEKEVAIGLPEDQVDLLRGITDVTIHTWAEPQRTLPGRVREIAAAADPVTRTYAT 245 Query: 253 KIALPDSAKDVRLGMTAYVAFAGKTSGEMIRLPLTALYPVDGKTSVWLVE--NGAVKVVP 310 ++ +P+ D++LGMTA V F + IR+PLTAL G+ VW+ + G VK VP Sbjct: 246 RVTVPNPPADLKLGMTAVVTFMRSGATAAIRVPLTALLQEQGRNQVWIYDAAAGTVKPVP 305 Query: 311 VQLGGQSGNDVLISAGLTAGQTVVTAGVNLLKPGQKVKIL 350 V LG GN+V + GL GQT+VTAGV+LL+ GQKV+ L Sbjct: 306 VTLGEAIGNEVEVRQGLAPGQTIVTAGVHLLRAGQKVRPL 345