BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0265.p (316 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773750.1| HlyD-family secretion protein [Herbaspirillu... 451 e-125 gb|EFV85475.1| HlyD family secretion protein [Achromobacter xylo... 428 e-118 ref|YP_287027.1| secretion protein HlyD [Dechloromonas aromatica... 427 e-117 ref|ZP_06684534.1| multidrug efflux pump BpeE [Achromobacter pie... 427 e-117 ref|NP_886986.1| hemolysin D [Bordetella bronchiseptica RB50] >g... 427 e-117 >ref|YP_003773750.1| HlyD-family secretion protein [Herbaspirillum seropedicae SmR1] gb|ADJ61842.1| HlyD-family secretion protein [Herbaspirillum seropedicae SmR1] Length = 399 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 231/297 (77%), Positives = 268/297 (90%) Query: 1 VHFKDGAMVKKGDVLFTIDPRPYAAEVARAQAQLAGAEARAAYTASDVARGQRLLGDNAI 60 VHFKDGA+VKKGDVLFTIDPRPY AEVARA+AQLAGAEARA YTASD+ARGQRLL DNAI Sbjct: 90 VHFKDGALVKKGDVLFTIDPRPYEAEVARAEAQLAGAEARAGYTASDLARGQRLLSDNAI 149 Query: 61 AKRDYEEKQNASREAAANVQAAQAALRSARLNLEYTQIVAPVSGRMSRAEVTVGNIVSVG 120 AKRD+EEKQNASREA+ANV AA+AALR+ARLNLEYT+I APVSGR+SRAEVTVGN+V+ G Sbjct: 150 AKRDFEEKQNASREASANVAAARAALRAARLNLEYTRITAPVSGRISRAEVTVGNVVNPG 209 Query: 121 SATPALSTLVSMSKIYASFDVDEQSFLKYVNPARAKGTSVAVFMGLANEDAYSREGKVGS 180 +A L+TLVS++K+YASFDVDEQSFLKYVNPARA G +V V +GLANED YSR+G+VGS Sbjct: 210 AANAPLTTLVSVAKVYASFDVDEQSFLKYVNPARAAGATVPVELGLANEDGYSRKGRVGS 269 Query: 181 IDNRIDTSSGTIRVRAVFDNADGQLLPGLYARIRLGGGAPRDALLVDEKALGTDQDKRFV 240 +DNR+DT+SGTIRVRA+FDNA+ QL+PGLYAR+RLGGG P A+L+DEKA+GTDQDKRFV Sbjct: 270 VDNRLDTASGTIRVRAIFDNANSQLVPGLYARVRLGGGEPHQAVLIDEKAIGTDQDKRFV 329 Query: 241 LVLDKDNHATYREVRVGANQDGLRVIESGLKSGERVVVNGLQRVRPGDTVAPNLVPM 297 +V DKDNHA YR+V VGA DGL VIE GL+ GER+VVNGLQR+RPGD + P +VPM Sbjct: 330 MVADKDNHANYRQVVVGAGHDGLVVIEKGLQPGERIVVNGLQRIRPGDAITPTVVPM 386 >gb|EFV85475.1| HlyD family secretion protein [Achromobacter xylosoxidans C54] Length = 396 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 221/299 (73%), Positives = 263/299 (87%), Gaps = 1/299 (0%) Query: 1 VHFKDGAMVKKGDVLFTIDPRPYAAEVARAQAQLAGAEARAAYTASDVARGQRLLGDNAI 60 VHF+DG++VKKGDVLFTIDPRPYAAEV RA A L A+ARA+YTA+++ARGQRLL DNAI Sbjct: 85 VHFQDGSIVKKGDVLFTIDPRPYAAEVDRAAAALTAAKARASYTATELARGQRLLADNAI 144 Query: 61 AKRDYEEKQNASREAAANVQAAQAALRSARLNLEYTQIVAPVSGRMSRAEVTVGNIVSVG 120 A+RD+EEKQNA+REAAAN+Q AQAAL A+LNL YT+I APV+GR+SRAEVTVGN+V+ G Sbjct: 145 ARRDFEEKQNAAREAAANLQGAQAALDYAKLNLGYTRIEAPVAGRVSRAEVTVGNVVAAG 204 Query: 121 SATPALSTLVSMSKIYASFDVDEQSFLKYVNPAR-AKGTSVAVFMGLANEDAYSREGKVG 179 +A+ L+TLVS+SK+YASFDVDEQ+FLKYVNPAR K SV V +GLANED YSR G V Sbjct: 205 AASVPLTTLVSVSKMYASFDVDEQTFLKYVNPARNGKAGSVPVELGLANEDGYSRTGFVQ 264 Query: 180 SIDNRIDTSSGTIRVRAVFDNADGQLLPGLYARIRLGGGAPRDALLVDEKALGTDQDKRF 239 S+DNR+D +SGTIRVRA FDNADG LLPGLYARIRLGG PR A+L+DEKA+GTDQDKR+ Sbjct: 265 SVDNRLDATSGTIRVRAEFDNADGTLLPGLYARIRLGGSEPRSAVLIDEKAIGTDQDKRY 324 Query: 240 VLVLDKDNHATYREVRVGANQDGLRVIESGLKSGERVVVNGLQRVRPGDTVAPNLVPMV 298 VLVLD NHA YR+V++GANQ+GLRV++SGL +GER+VVNGLQRVRPGD V+P +VPMV Sbjct: 325 VLVLDDKNHANYRQVKLGANQEGLRVVDSGLAAGERIVVNGLQRVRPGDAVSPTVVPMV 383 >ref|YP_287027.1| secretion protein HlyD [Dechloromonas aromatica RCB] gb|AAZ48557.1| Secretion protein HlyD [Dechloromonas aromatica RCB] Length = 387 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 208/310 (67%), Positives = 267/310 (86%), Gaps = 9/310 (2%) Query: 1 VHFKDGAMVKKGDVLFTIDPRPYAAEVARAQAQLAGAEARAAYTASDVARGQRLLGDNAI 60 VHFKDG++VKKG++LFTIDPRP+AAEVARA+AQLA +AR AYTASD+ARG+RLL +NAI Sbjct: 84 VHFKDGSLVKKGELLFTIDPRPFAAEVARAEAQLAAMDARVAYTASDLARGERLLAENAI 143 Query: 61 AKRDYEEKQNASREAAANVQAAQAALRSARLNLEYTQIVAPVSGRMSRAEVTVGNIVSVG 120 A+RD++EKQNA+REA AN+QAA+AAL+ A+LNLEYT+I AP++GR+SRAEVTVGN+V+ G Sbjct: 144 ARRDFDEKQNAAREAKANLQAARAALKVAQLNLEYTRITAPIAGRVSRAEVTVGNLVAPG 203 Query: 121 SATPALSTLVSMSKIYASFDVDEQSFLKYVNPARAKGTSVAVFMGLANEDAYSREGKVGS 180 + PAL++LVS +IYA+FDVDEQS+LK VN + +G ++ + +GLA+++ YSREGK+ S Sbjct: 204 NG-PALTSLVSADRIYAAFDVDEQSYLKVVNGS--QGKALPIHLGLADDEGYSREGKLSS 260 Query: 181 IDNRIDTSSGTIRVRAVFDNADGQLLPGLYARIRLGGGAPRDALLVDEKALGTDQDKRFV 240 +DNR+D++SGTIR+RA+ DN DG+L+PGLYARIRLG RDALL+DEKA+GTDQ KRFV Sbjct: 261 VDNRLDSTSGTIRLRALVDNPDGKLVPGLYARIRLGAAGQRDALLIDEKAVGTDQAKRFV 320 Query: 241 LVLDKDNHATYREVRVGANQDGLRVIESGLKSGERVVVNGLQRVRPGDTVAPNLVPMVKV 300 LV+ + N YREV++G+ QDGLRV+ESGLK+GER+VVNGLQRVRPGD V PN+VPM Sbjct: 321 LVVGEGNQTAYREVQLGSVQDGLRVVESGLKAGERIVVNGLQRVRPGDQVTPNIVPM--- 377 Query: 301 AGAGGTAPAA 310 GG APAA Sbjct: 378 ---GGVAPAA 384 >ref|ZP_06684534.1| multidrug efflux pump BpeE [Achromobacter piechaudii ATCC 43553] gb|EFF78562.1| multidrug efflux pump BpeE [Achromobacter piechaudii ATCC 43553] Length = 398 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 218/299 (72%), Positives = 263/299 (87%), Gaps = 1/299 (0%) Query: 1 VHFKDGAMVKKGDVLFTIDPRPYAAEVARAQAQLAGAEARAAYTASDVARGQRLLGDNAI 60 VHF+DG++VKKGDVLFTIDPRPYAAEV RA A L A+ARA+YTA+++ARGQRLL DNAI Sbjct: 85 VHFQDGSIVKKGDVLFTIDPRPYAAEVDRAAAALTAAKARASYTATELARGQRLLADNAI 144 Query: 61 AKRDYEEKQNASREAAANVQAAQAALRSARLNLEYTQIVAPVSGRMSRAEVTVGNIVSVG 120 A+RD+EEKQNASREAAAN+Q AQAAL A+LNL YT+I APV+GR+SRAEVTVGN+V+ G Sbjct: 145 ARRDFEEKQNASREAAANLQGAQAALDYAKLNLGYTRIEAPVTGRVSRAEVTVGNVVAAG 204 Query: 121 SATPALSTLVSMSKIYASFDVDEQSFLKYVNPAR-AKGTSVAVFMGLANEDAYSREGKVG 179 +A+ L+TLVS+SK+YASFDVDEQ+FLKYVNPAR + SV V +GLANE+ YSR G V Sbjct: 205 AASVPLTTLVSVSKMYASFDVDEQTFLKYVNPARNGRAGSVPVELGLANEEGYSRTGVVQ 264 Query: 180 SIDNRIDTSSGTIRVRAVFDNADGQLLPGLYARIRLGGGAPRDALLVDEKALGTDQDKRF 239 S+DNR+D +SGTIRVRA FDNADG LLPGLYAR+RLGG PR A+L+DEKA+GTDQDKR+ Sbjct: 265 SVDNRLDATSGTIRVRAEFDNADGSLLPGLYARVRLGGSDPRSAVLIDEKAIGTDQDKRY 324 Query: 240 VLVLDKDNHATYREVRVGANQDGLRVIESGLKSGERVVVNGLQRVRPGDTVAPNLVPMV 298 VLVLD NHA YR+V++GANQ+GLRV++SGL +GER+VVNGLQR+RPGD V+P +VPMV Sbjct: 325 VLVLDDKNHAVYRQVKLGANQEGLRVVDSGLSAGERIVVNGLQRIRPGDAVSPTVVPMV 383 >ref|NP_886986.1| hemolysin D [Bordetella bronchiseptica RB50] emb|CAE30935.1| HlyD family secretion protein [Bordetella bronchiseptica RB50] Length = 393 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 225/310 (72%), Positives = 266/310 (85%), Gaps = 2/310 (0%) Query: 1 VHFKDGAMVKKGDVLFTIDPRPYAAEVARAQAQLAGAEARAAYTASDVARGQRLLGDNAI 60 VHF+DG++VKKGDVLFTIDPRPY AEV RA+A LA A AR +YTA+D+ARGQRLL +NAI Sbjct: 84 VHFQDGSLVKKGDVLFTIDPRPYVAEVDRARAALAAARARVSYTAADLARGQRLLAENAI 143 Query: 61 AKRDYEEKQNASREAAANVQAAQAALRSARLNLEYTQIVAPVSGRMSRAEVTVGNIVSVG 120 A+RD+EEKQNA+REAAAN+Q AQAAL SA LNL YT+I APV GR+SRAEVTVGN+V+ G Sbjct: 144 ARRDFEEKQNAAREAAANLQGAQAALESAELNLGYTRIAAPVDGRVSRAEVTVGNVVAAG 203 Query: 121 SATPALSTLVSMSKIYASFDVDEQSFLKYVNPARAKGTSVAVFMGLANEDAYSREGKVGS 180 +A+ L+TLVS++++YASFDVDEQ+FLKYVNPAR GT V V +GLANED YSREG+V S Sbjct: 204 AASVPLTTLVSVARMYASFDVDEQTFLKYVNPAR-NGT-VPVQLGLANEDGYSREGRVQS 261 Query: 181 IDNRIDTSSGTIRVRAVFDNADGQLLPGLYARIRLGGGAPRDALLVDEKALGTDQDKRFV 240 +DNR+D +SGTIRVRAVFDNADG L+PGLYARIRLGGGAPRDA+LVDE+A+GTDQ+KRFV Sbjct: 262 VDNRMDPTSGTIRVRAVFDNADGSLVPGLYARIRLGGGAPRDAVLVDERAIGTDQNKRFV 321 Query: 241 LVLDKDNHATYREVRVGANQDGLRVIESGLKSGERVVVNGLQRVRPGDTVAPNLVPMVKV 300 LVL++ N YREV +GAN LRVIE+GL +GER+VVNGLQRVRPGD VAP+ V M Sbjct: 322 LVLEEGNRTAYREVLLGANVGPLRVIENGLHAGERIVVNGLQRVRPGDVVAPSQVSMDTA 381 Query: 301 AGAGGTAPAA 310 GA TA AA Sbjct: 382 PGAVKTAAAA 391