BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0262.p (386 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773748.1| outer membrane drug efflux protein [Herbaspi... 551 e-155 ref|YP_001633128.1| putative outer membrane efflux protein [Bord... 457 e-126 ref|YP_558133.1| RND efflux system outer membrane lipoprotein [B... 453 e-125 ref|YP_001860792.1| RND efflux system outer membrane lipoprotein... 446 e-123 ref|YP_004415312.1| putative outer membrane efflux protein [Pusi... 444 e-122 >ref|YP_003773748.1| outer membrane drug efflux protein [Herbaspirillum seropedicae SmR1] gb|ADJ61840.1| outer membrane drug efflux protein [Herbaspirillum seropedicae SmR1] Length = 504 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 294/372 (79%), Positives = 332/372 (89%) Query: 15 KLLKPLRISSALLAAMLVLAGCSLAPTYERPAVNTSVAYKEAADESANAKAASDWKTAQP 74 +LL+P+RI SALLAA+LVLAGCS+APTYERP+V+T A+KEAA + + S WKTAQP Sbjct: 10 RLLRPVRIGSALLAALLVLAGCSVAPTYERPSVDTPAAFKEAAPATQTGENGSQWKTAQP 69 Query: 75 AEDLARGEWWKIFNDEGLNALEVQALEANQNLKAAAARLSQSRALRQDARSGLFPQVNAG 134 AED+ARGEWWKIF DE LNALE A +ANQ+LKAAAARL Q+RAL +DAR+G FPQV+AG Sbjct: 70 AEDIARGEWWKIFGDEKLNALEDTAQQANQDLKAAAARLGQARALTRDARAGYFPQVDAG 129 Query: 135 FGATRQRPSPASQGLAPDANTTPNTLWRAQLGVSYEADLFGRVASTVDAATADAQRSEAL 194 GATRQRPSPASQGL DA+T PNTL+RAQ+ VSYE DLFGRVASTVDAATADAQRSEAL Sbjct: 130 VGATRQRPSPASQGLPADADTRPNTLYRAQVNVSYEVDLFGRVASTVDAATADAQRSEAL 189 Query: 195 FHSVRLALQADVAQQYFLLRELDAEQELYSGTVDLRTQSLKLVQRRFNEGDISEVDVARA 254 FHSV LALQADVAQQYFL+RELDA LY GTVDLR +SL+LVQRRF+EGDISEVDVARA Sbjct: 190 FHSVLLALQADVAQQYFLVRELDAAAALYRGTVDLRQESLRLVQRRFDEGDISEVDVARA 249 Query: 255 KSELASAQSESFGIARQRANAEHALAILLGKTPAEFDFKPQPLQRLSITIPAGLPSDLLE 314 ++ELASAQSE+ GIARQRA AEHALAILLG+TPAEF PQPL RL++T+P GLPS LLE Sbjct: 250 RAELASAQSEALGIARQRATAEHALAILLGRTPAEFSLPPQPLTRLAVTVPPGLPSALLE 309 Query: 315 RRPDIAAAERAMAAANARVGVARSAWFPRLDLTGGLGYESAKLGDLFNWSSRTFLLGPLV 374 RRPDIAAAERAMAAANARVGVA+SA+FP L+LTGGLGYESA+LGDLFNWSSRTFLLGPLV Sbjct: 310 RRPDIAAAERAMAAANARVGVAKSAFFPSLNLTGGLGYESAQLGDLFNWSSRTFLLGPLV 369 Query: 375 GTALTLPIFDGG 386 GTAL++P+FDGG Sbjct: 370 GTALSMPLFDGG 381 >ref|YP_001633128.1| putative outer membrane efflux protein [Bordetella petrii DSM 12804] emb|CAP44861.1| putative outer membrane efflux protein [Bordetella petrii] Length = 492 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 240/349 (68%), Positives = 288/349 (82%), Gaps = 4/349 (1%) Query: 38 LAPTYERPAVNTSVAYKEAADESANAKAASDWKTAQPAEDLARGEWWKIFNDEGLNALEV 97 + P Y+RP V+T AYKEA A A W+TAQPAE+ RGEWWK+F D+ LNALE Sbjct: 25 VGPEYQRPEVDTPAAYKEALP----AHEAGSWQTAQPAEEALRGEWWKLFGDDTLNALET 80 Query: 98 QALEANQNLKAAAARLSQSRALRQDARSGLFPQVNAGFGATRQRPSPASQGLAPDANTTP 157 QA +AN +L+AAAARL Q+RAL +ARS FP V+AGFG TRQRPSPASQGL+ + +T P Sbjct: 81 QAQQANHSLQAAAARLKQARALLGNARSEQFPTVDAGFGPTRQRPSPASQGLSANDSTDP 140 Query: 158 NTLWRAQLGVSYEADLFGRVASTVDAATADAQRSEALFHSVRLALQADVAQQYFLLRELD 217 +TLWRAQ+GVSYE DLFGRVASTVDAATAD Q+SEAL+ SV LALQADVAQ YF +RELD Sbjct: 141 STLWRAQVGVSYEVDLFGRVASTVDAATADVQQSEALYRSVLLALQADVAQAYFQVRELD 200 Query: 218 AEQELYSGTVDLRTQSLKLVQRRFNEGDISEVDVARAKSELASAQSESFGIARQRANAEH 277 A +LY TV+LR ++L+L+QRR++ GDISE+D+ARA+SEL SA+SE+ G R+RANAEH Sbjct: 201 AGLQLYRQTVELRAETLQLIQRRYDAGDISELDLARARSELESARSEALGFERRRANAEH 260 Query: 278 ALAILLGKTPAEFDFKPQPLQRLSITIPAGLPSDLLERRPDIAAAERAMAAANARVGVAR 337 ALA+LLGK P+EF QPL R+++ +PAGLPS LLERRPDIAAAERAMAAANARVGVA+ Sbjct: 261 ALAVLLGKAPSEFSLPAQPLSRIAVNVPAGLPSTLLERRPDIAAAERAMAAANARVGVAK 320 Query: 338 SAWFPRLDLTGGLGYESAKLGDLFNWSSRTFLLGPLVGTALTLPIFDGG 386 SA+FP L++TG G+ESA+LGDLF WSSRTFLLGPLVG AL+LPIFDGG Sbjct: 321 SAFFPSLNITGAAGFESAELGDLFEWSSRTFLLGPLVGAALSLPIFDGG 369 >ref|YP_558133.1| RND efflux system outer membrane lipoprotein [Burkholderia xenovorans LB400] gb|ABE30081.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia xenovorans LB400] Length = 516 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 233/364 (64%), Positives = 288/364 (79%), Gaps = 2/364 (0%) Query: 24 SALLAAMLVLAGCSLAPTYERPAVNTSVAYKEAADESANAKAASDWKTAQPAEDLARGEW 83 S LL A++VL+GCSLAPTYE P+ T+ +KEA + +A+ A WKTAQP+ED+ARGEW Sbjct: 14 SVLLGALMVLSGCSLAPTYEVPSTPTTATFKEAPQQPLSAQEAGTWKTAQPSEDVARGEW 73 Query: 84 WKIFNDEGLNALEVQALEANQNLKAAAARLSQSRALRQDARSGLFPQVNAGFGATRQRPS 143 WK+F+D LN LE QAL+ANQNLKAAAAR++++RA+ Q AR+GLFP ++AGFG TRQR S Sbjct: 74 WKVFDDAKLNDLEQQALDANQNLKAAAARVNEARAMNQAARAGLFPSLDAGFGPTRQRVS 133 Query: 144 PASQGLAPDANTTPN-TLWRAQLGVSYEADLFGRVASTVDAATADAQRSEALFHSVRLAL 202 AS PD P T WRAQ SYE DLFGRVASTVDAA AD QRSEALF SV LAL Sbjct: 134 AASL-FEPDGTNVPQRTFWRAQASASYEVDLFGRVASTVDAARADTQRSEALFRSVMLAL 192 Query: 203 QADVAQQYFLLRELDAEQELYSGTVDLRTQSLKLVQRRFNEGDISEVDVARAKSELASAQ 262 QADVAQ YF LRELDAE E++ V+LR +LKLVQRR+ EG+I+E+D++RAK+ELASAQ Sbjct: 193 QADVAQNYFALRELDAESEVFRNAVELRQHALKLVQRRYTEGEITELDLSRAKAELASAQ 252 Query: 263 SESFGIARQRANAEHALAILLGKTPAEFDFKPQPLQRLSITIPAGLPSDLLERRPDIAAA 322 S++ + R RA +EH+LA+LLGK PAEF P++ +++ +P GLPS LLERRPDIAAA Sbjct: 253 SDAMTVQRLRAASEHSLAVLLGKAPAEFSMAADPIRPVNLRVPPGLPSSLLERRPDIAAA 312 Query: 323 ERAMAAANARVGVARSAWFPRLDLTGGLGYESAKLGDLFNWSSRTFLLGPLVGTALTLPI 382 ERAMAAAN+R+G+A++A+FP L +TG G+ESA +GDLF WSSR FLLGPL GTAL +PI Sbjct: 313 ERAMAAANSRIGIAKAAFFPSLTITGTGGFESATIGDLFKWSSRAFLLGPLAGTALNIPI 372 Query: 383 FDGG 386 FDGG Sbjct: 373 FDGG 376 >ref|YP_001860792.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gb|ACC73746.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 521 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 225/360 (62%), Positives = 274/360 (76%), Gaps = 9/360 (2%) Query: 36 CSLAPTYERPAVNTSVAYKEAADESAN---------AKAASDWKTAQPAEDLARGEWWKI 86 CS+ PTY RP T A+KEA + A A WKTA+PAED RGEWW + Sbjct: 29 CSVEPTYNRPDAPTPSAFKEAPATATTGDAAAAPLPASEAGTWKTAEPAEDAHRGEWWTV 88 Query: 87 FNDEGLNALEVQALEANQNLKAAAARLSQSRALRQDARSGLFPQVNAGFGATRQRPSPAS 146 F D LNALE QA +ANQ+LKAAAAR+ QSRAL +AR+ +P ++AGFG TR+R SPAS Sbjct: 89 FGDSTLNALEKQAADANQDLKAAAARVQQSRALTNEARAAWYPSIDAGFGPTRERLSPAS 148 Query: 147 QGLAPDANTTPNTLWRAQLGVSYEADLFGRVASTVDAATADAQRSEALFHSVRLALQADV 206 Q L +AN TLWRAQ V+YE DLFGRV+S V AA+AD +SEALF SV+LALQADV Sbjct: 149 QNLPNNANVPTQTLWRAQTTVAYEVDLFGRVSSNVHAASADEAQSEALFRSVQLALQADV 208 Query: 207 AQQYFLLRELDAEQELYSGTVDLRTQSLKLVQRRFNEGDISEVDVARAKSELASAQSESF 266 AQ YF LRE D + LY TV LR +LKLV+RRFNEGDI+E+DV+RA++ELA+A++++ Sbjct: 209 AQNYFQLREFDTQLSLYRQTVTLRENALKLVERRFNEGDINELDVSRARNELATARADAV 268 Query: 267 GIARQRANAEHALAILLGKTPAEFDFKPQPLQRLSITIPAGLPSDLLERRPDIAAAERAM 326 G+ARQRA +EH+LAILLGK PA+F F PL +++ +PAGLPS LLERRPDI+AAER M Sbjct: 269 GVARQRAASEHSLAILLGKPPADFTFPETPLAPVTVQVPAGLPSALLERRPDISAAERGM 328 Query: 327 AAANARVGVARSAWFPRLDLTGGLGYESAKLGDLFNWSSRTFLLGPLVGTALTLPIFDGG 386 AAANARVG+A+SA+FP+LD+TG G+ESA LGDLF WSSR FLLGP GTALT+PIFDGG Sbjct: 329 AAANARVGLAKSAFFPKLDITGAFGFESATLGDLFMWSSRAFLLGPFAGTALTVPIFDGG 388 >ref|YP_004415312.1| putative outer membrane efflux protein [Pusillimonas sp. T7-7] gb|AEC18688.1| putative outer membrane efflux protein [Pusillimonas sp. T7-7] Length = 489 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 247/367 (67%), Positives = 298/367 (81%), Gaps = 5/367 (1%) Query: 20 LRISSALLAAMLVLAGCSLAPTYERPAVNTSVAYKEAADESANAKAASDWKTAQPAEDLA 79 LR +S LA L+LAGC++ P Y+RP V+ A+KEA S + +AA WK AQPA+ LA Sbjct: 7 LRFTS--LAMALLLAGCAVGPDYQRPDVDVPNAFKEA---SLSPEAAKQWKMAQPADALA 61 Query: 80 RGEWWKIFNDEGLNALEVQALEANQNLKAAAARLSQSRALRQDARSGLFPQVNAGFGATR 139 RG WW IFND L+ LE QA+ ANQ+LK AAAR+ Q+RALRQ+A +GL P ++AGFG TR Sbjct: 62 RGRWWAIFNDPILDGLEDQAMSANQDLKVAAARVKQARALRQNAEAGLLPSLDAGFGPTR 121 Query: 140 QRPSPASQGLAPDANTTPNTLWRAQLGVSYEADLFGRVASTVDAATADAQRSEALFHSVR 199 QR S A+QGL D ++ TLWRAQ G+SYEADLFGR+AS VDAATADA++S ALF SVR Sbjct: 122 QRQSSAAQGLPEDTGSSAQTLWRAQAGISYEADLFGRIASDVDAATADAEQSAALFQSVR 181 Query: 200 LALQADVAQQYFLLRELDAEQELYSGTVDLRTQSLKLVQRRFNEGDISEVDVARAKSELA 259 LALQADVAQ YF +R LDAEQ+LY TVDLR ++L+LVQ+R++EG+ISE+D+ARAKS L+ Sbjct: 182 LALQADVAQAYFRIRRLDAEQDLYRRTVDLRGKTLELVQQRYDEGEISELDLARAKSALS 241 Query: 260 SAQSESFGIARQRANAEHALAILLGKTPAEFDFKPQPLQRLSITIPAGLPSDLLERRPDI 319 SA S++ GI R+RA AEHALA LLGKTPA+F P+PL R+S+ IPAGLPS LLERRPDI Sbjct: 242 SASSQALGIKRERAVAEHALATLLGKTPAQFALAPEPLGRVSVDIPAGLPSSLLERRPDI 301 Query: 320 AAAERAMAAANARVGVARSAWFPRLDLTGGLGYESAKLGDLFNWSSRTFLLGPLVGTALT 379 AAAERAMAAANARVGVA++A+FPRL LTG GYES++LG+L WSSRTFLLGPLVGT LT Sbjct: 302 AAAERAMAAANARVGVAKAAFFPRLTLTGAFGYESSELGNLLEWSSRTFLLGPLVGTMLT 361 Query: 380 LPIFDGG 386 LPIFDGG Sbjct: 362 LPIFDGG 368