BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0260.p         (167 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_726395.1| hypothetical protein H16_A1926 [Ralstonia eutro...   219   1e-55
ref|YP_004685731.1| hypothetical protein CNE_1c19100 [Cupriavidu...   215   2e-54
ref|YP_296059.1| hypothetical protein Reut_A1850 [Ralstonia eutr...   214   3e-54
gb|EGP42490.1| hypothetical protein AXXA_31007 [Achromobacter xy...   214   5e-54
ref|YP_003773747.1| hypothetical protein Hsero_0313 [Herbaspiril...   213   5e-54

>ref|YP_726395.1| hypothetical protein H16_A1926 [Ralstonia eutropha H16]
 emb|CAJ93027.1| Uncharacterized protein conserved in bacteria [Ralstonia eutropha
           H16]
          Length = 168

 Score =  219 bits (558), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 105/167 (62%), Positives = 130/167 (77%)

Query: 1   MSLTMHQISIPVFIRALNNLSTLLNKAAAHAEENKLDPDTLLTARLFEDMYPLTGQIQRA 60
           M+L+M+++SIP+FIRAL NL+ +L+K AAHA+   +DP  L+  RL  DM  L  Q+QRA
Sbjct: 1   MALSMYEVSIPLFIRALGNLAAILDKGAAHAQAQGMDPADLIQTRLIADMDALPAQVQRA 60

Query: 61  SDAAKFGASRLSAIQPPSFADEETTFPQLQERIARTIAFLETVTPEQLDGSAEREIVIKL 120
           SDAAK  A+RL+ I+ PSFAD ETTF +L++RIARTI FLE VTPEQL+GS +R I +KL
Sbjct: 61  SDAAKGCAARLAGIEVPSFADTETTFAELRDRIARTIGFLEQVTPEQLEGSEQRAIELKL 120

Query: 121 RGNETKFTGQAYLLTFALPNFLFHVTTAYDILRHKGVKIGKMDYLGF 167
           R     F G++YLL FALPNF FHVTTAYDILRHKGV+IGK DYLG 
Sbjct: 121 RQGPMTFDGKSYLLGFALPNFYFHVTTAYDILRHKGVQIGKRDYLGL 167


>ref|YP_004685731.1| hypothetical protein CNE_1c19100 [Cupriavidus necator N-1]
 gb|AEI77250.1| hypothetical protein CNE_1c19100 [Cupriavidus necator N-1]
          Length = 168

 Score =  215 bits (547), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 104/167 (62%), Positives = 127/167 (76%)

Query: 1   MSLTMHQISIPVFIRALNNLSTLLNKAAAHAEENKLDPDTLLTARLFEDMYPLTGQIQRA 60
           M+L+M+ +SIP FIRAL NL+ +L+K AAHA+   +DP  L+  RL  DM  L  Q+QRA
Sbjct: 1   MALSMYDVSIPPFIRALANLAEILDKGAAHAQAQGMDPADLIQTRLIADMDALPAQVQRA 60

Query: 61  SDAAKFGASRLSAIQPPSFADEETTFPQLQERIARTIAFLETVTPEQLDGSAEREIVIKL 120
           SDAAK  A+RL+ I+ PSFAD ETTF +LQ+RIARTI FLE + PEQL+GS +R I +KL
Sbjct: 61  SDAAKGCAARLAGIEVPSFADTETTFAELQDRIARTIVFLEQIAPEQLEGSEQRAIELKL 120

Query: 121 RGNETKFTGQAYLLTFALPNFLFHVTTAYDILRHKGVKIGKMDYLGF 167
           R     F G++YLL FALPNF FHVTTAYDILRHKGV+IGK DYLG 
Sbjct: 121 RQGPMTFDGKSYLLGFALPNFYFHVTTAYDILRHKGVQIGKRDYLGL 167


>ref|YP_296059.1| hypothetical protein Reut_A1850 [Ralstonia eutropha JMP134]
 gb|AAZ61215.1| conserved hypothetical protein [Ralstonia eutropha JMP134]
          Length = 168

 Score =  214 bits (545), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 104/166 (62%), Positives = 123/166 (74%)

Query: 1   MSLTMHQISIPVFIRALNNLSTLLNKAAAHAEENKLDPDTLLTARLFEDMYPLTGQIQRA 60
           M+L+M+ +SIP FIRAL NLS +L K AAHA+    DP  L+  RL  DM  L  Q+QRA
Sbjct: 1   MALSMYDVSIPAFIRALTNLSAILEKGAAHAQAQGTDPADLIQTRLIADMDTLAAQVQRA 60

Query: 61  SDAAKFGASRLSAIQPPSFADEETTFPQLQERIARTIAFLETVTPEQLDGSAEREIVIKL 120
           SDAAK  A+RL+ I  PS AD E TFP+LQ+RI +TI FL++V PEQLDGS  R I +KL
Sbjct: 61  SDAAKGCAARLAGIDNPSMADTEATFPELQQRIIKTIDFLKSVRPEQLDGSETRTIELKL 120

Query: 121 RGNETKFTGQAYLLTFALPNFLFHVTTAYDILRHKGVKIGKMDYLG 166
           R     F G++YLL FALPNF FHVTTAYDILRHKGV+IGKMDYLG
Sbjct: 121 RQGAITFDGKSYLLGFALPNFYFHVTTAYDILRHKGVQIGKMDYLG 166


>gb|EGP42490.1| hypothetical protein AXXA_31007 [Achromobacter xylosoxidans AXX-A]
          Length = 175

 Score =  214 bits (544), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 102/166 (61%), Positives = 126/166 (75%)

Query: 1   MSLTMHQISIPVFIRALNNLSTLLNKAAAHAEENKLDPDTLLTARLFEDMYPLTGQIQRA 60
           MSL+M+Q S+PVFIR L+ L+TLL K AAHA  N +DP  L+ ARL  DMYPL+GQ+QRA
Sbjct: 6   MSLSMYQASVPVFIRGLSVLATLLEKGAAHAAANGIDPAELVNARLAPDMYPLSGQVQRA 65

Query: 61  SDAAKFGASRLSAIQPPSFADEETTFPQLQERIARTIAFLETVTPEQLDGSAEREIVIKL 120
           SDA+KF   RLS ++ P F DEETTF QLQ+R+A TIA+L +V  E LDG+  R++ +  
Sbjct: 66  SDASKFATQRLSQVESPKFPDEETTFEQLQKRVADTIAYLRSVPAEALDGAEGRKVTLSF 125

Query: 121 RGNETKFTGQAYLLTFALPNFLFHVTTAYDILRHKGVKIGKMDYLG 166
              + +F G AYLLTFALPNF FHVTTAYDILRH GV IGK+D+LG
Sbjct: 126 GEFKPEFQGDAYLLTFALPNFYFHVTTAYDILRHAGVPIGKLDFLG 171


>ref|YP_003773747.1| hypothetical protein Hsero_0313 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61839.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 167

 Score =  213 bits (543), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 99/167 (59%), Positives = 125/167 (74%)

Query: 1   MSLTMHQISIPVFIRALNNLSTLLNKAAAHAEENKLDPDTLLTARLFEDMYPLTGQIQRA 60
           MSL+++Q+SIP+ I  L+ LSTLL KA  HA +++LDP+ LLTARL+EDMY L+GQ+QRA
Sbjct: 1   MSLSLYQVSIPMLIHGLDTLSTLLEKAEQHAAQHQLDPNELLTARLYEDMYALSGQVQRA 60

Query: 61  SDAAKFGASRLSAIQPPSFADEETTFPQLQERIARTIAFLETVTPEQLDGSAEREIVIKL 120
           SD AK  ASRLS +  P+FAD+E +F  LQ RI +TI FLE++  + +DG  ER + +KL
Sbjct: 61  SDTAKATASRLSGVAAPAFADDEASFDDLQARINKTIVFLESIPADAIDGQEERAVTMKL 120

Query: 121 RGNETKFTGQAYLLTFALPNFLFHVTTAYDILRHKGVKIGKMDYLGF 167
           RG E   T Q YL  F LPNF FHVTTAY ILRHKGVK+GKMD+L  
Sbjct: 121 RGEERTMTAQHYLTAFGLPNFFFHVTTAYGILRHKGVKLGKMDFLAL 167