BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0256.p (541 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776428.1| methyl-accepting chemotaxis transducer trans... 575 e-162 ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer ... 535 e-150 ref|YP_001351773.1| methyl-accepting chemotaxis protein [Janthin... 535 e-149 ref|YP_522203.1| methyl-accepting chemotaxis sensory transducer ... 498 e-138 ref|ZP_03543343.1| methyl-accepting chemotaxis sensory transduce... 492 e-137 >ref|YP_003776428.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64520.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 536 Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust. Identities = 331/518 (63%), Positives = 403/518 (77%), Gaps = 7/518 (1%) Query: 1 MGRMKIGKRLTLGFAAIMLLSIVITAIGIWRLQAVSDVTRAMVEHSARKERLISSWYGSL 60 +G M IG+RLTLGFA I+ SI+I IG+WRL V+ TR M+ + ERL++ WY +L Sbjct: 4 IGNMNIGRRLTLGFALILTFSIIIAGIGLWRLDHVAQATREMMAEPLKTERLMADWYTNL 63 Query: 61 RAGILRXKVRTIAISRSADPTLKTYFIDEAKASTNNSTRLQKEVGELLSSDEEKSLFQNI 120 AGI R TIAI++S+DP L YF E AS+ +S QK+V LLS+ EEK+LFQ I Sbjct: 64 VAGIRR----TIAIAKSSDPALGPYFAAEVAASSKSSGEYQKQVEALLSTPEEKALFQKI 119 Query: 121 GERRKVYLASHYRILDLKSAGNVEEGNRLLDQEFVPLARSYQDSMLKLLELEQRDIDKTT 180 GE RK+YL+S I K+AGN EE R+LDQ FVP A +YQD+M KL++ +++++D T Sbjct: 120 GELRKLYLSSRDEINKAKAAGNTEEAMRILDQVFVPNATAYQDTMRKLVDFQRKEMDDTA 179 Query: 181 QQIDDIAAGSRRLLLILEGLSLLLGCFCAWYLTVGITRPINAALGISRRVAAGDLTTQVS 240 ++ID IAA SR L+L+LEGL LLLG A YLT+GIT+P++ A+ +SR VA GDL+++++ Sbjct: 180 REIDAIAAKSRTLILVLEGLILLLGIVFARYLTLGITKPLHRAVDVSRCVAEGDLSSEIA 239 Query: 241 GGDGKSADEVGQLLSSLNDMNGSLRNIVSNVRQGTNTIAVASAEISVGNHDLSARTEQQA 300 S DE GQLL SL DMN SLR IVSNVR GT+TI+ AS+EI+ GN DLS+RTEQQA Sbjct: 240 V---TSRDETGQLLQSLKDMNQSLRGIVSNVRSGTDTISTASSEIAAGNLDLSSRTEQQA 296 Query: 301 SALEETASAMEELISTVRQNADNADTASRLAAAASGIAVEGGEVVGRVVTTMSAINGSSR 360 S+L ETASAMEELISTVRQNADNA AS+LA +AS +A +GG VV +VV TM AIN SSR Sbjct: 297 SSLAETASAMEELISTVRQNADNARQASQLANSASAVAEQGGGVVSQVVDTMGAINASSR 356 Query: 361 KIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKL 420 KIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSA+AAKEIK Sbjct: 357 KIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKE 416 Query: 421 LIDDSVKTVGEGGVLVEQAGVTMERVVGSVRKVAEIVGEISLASREQASGIEQVNHAISQ 480 LI+DSV V +G LVEQAG TM+ VV SVR+V +IV EIS AS EQ GIEQ+N AI+Q Sbjct: 417 LINDSVGKVDDGSRLVEQAGNTMQEVVSSVRRVTDIVAEISAASTEQTHGIEQINLAITQ 476 Query: 481 MDEMTQQNAALVEQAAAAASSMQTQAASLAQLVSVFSL 518 MD++TQQNAALVE+AAAAA+SMQTQA L Q+VSVF L Sbjct: 477 MDQVTQQNAALVEEAAAAAASMQTQAGRLMQMVSVFRL 514 >ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] gb|ABD69948.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] Length = 583 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 284/517 (54%), Positives = 370/517 (71%), Gaps = 7/517 (1%) Query: 4 MKIGKRLTLGFAAIMLLSIVITAIGIWRLQAVSDVTRAMVEHSARKERLISSWYGSLRAG 63 MKIGKRL GFA ++ +++IT IG+W+L A+ + TR M KERLIS W ++ Sbjct: 7 MKIGKRLGFGFAVVLAFAVLITGIGVWQLNALGNATREMTREPLAKERLISDWSRNINVA 66 Query: 64 ILRXKVRTIAISRSADPTLKTYFIDEAKASTNNSTRLQKEVGELLSSDEEKSLFQNIGER 123 + +RT A+++S+DP+L +F A T +++ L K++ LLSS EEK LF + + Sbjct: 67 V----IRTTAVAKSSDPSLVPFFSTNAAEITKSTSALLKQIEPLLSSQEEKDLFSKVSDV 122 Query: 124 RKVYLASHYRILDLKSAGNVEEGNRLLDQEFVPLARSYQDSMLKLLELEQRDIDKTTQQI 183 RK YL+S ++ LK+ G +E NRLL+ ++P A +Y + + L L+++++D +I Sbjct: 123 RKAYLSSRDQVTKLKADGQADEANRLLESTYIPAADNYMKLVSEFLGLQRKNLDAKAVEI 182 Query: 184 DDIAAGSRRLLLILEGLSLLLGCFCAWYLTVGITRPINAALGISRRVAAGDLTTQVSGGD 243 I SR L+ L L L G CAW LTVGIT P+ A+ ++RRVA GDL T + + Sbjct: 183 SGIETTSRNYLVALAALVLTFGVICAWLLTVGITGPLTNAVAVARRVADGDLATDIQT-E 241 Query: 244 GKSADEVGQLLSSLNDMNGSLRNIVSNVRQGTNTIAVASAEISVGNHDLSARTEQQASAL 303 GK DE QLL +L+ M +L IV NVRQG+ +A ASAEI+ GN+DLSARTEQQASAL Sbjct: 242 GK--DETAQLLQALSAMKDNLARIVGNVRQGSEGVATASAEIAQGNNDLSARTEQQASAL 299 Query: 304 EETASAMEELISTVRQNADNADTASRLAAAASGIAVEGGEVVGRVVTTMSAINGSSRKIV 363 EETA++MEEL +TVRQNADNA A++LA +AS +A++GGEVV RVV TM IN SS+KI Sbjct: 300 EETAASMEELSATVRQNADNARQANQLAQSASTVAIKGGEVVSRVVETMKGINDSSKKIS 359 Query: 364 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKLLID 423 DII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLA RSA AAKEIK LI+ Sbjct: 360 DIIQVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAGRSADAAKEIKGLIN 419 Query: 424 DSVKTVGEGGVLVEQAGVTMERVVGSVRKVAEIVGEISLASREQASGIEQVNHAISQMDE 483 DSV+ V +G LV+QAGVTM VV S+R+V +I+GEIS AS EQ+ G+ QV+ A++QMD+ Sbjct: 420 DSVQRVEQGSTLVDQAGVTMTEVVSSIRRVTDIMGEISAASTEQSQGVAQVSEAVTQMDQ 479 Query: 484 MTQQNAALVEQAAAAASSMQTQAASLAQLVSVFSLDH 520 +TQQNAALVE+ AAAASS+++QA L VSVF L Sbjct: 480 VTQQNAALVEEMAAAASSLKSQAQELVGTVSVFKLSQ 516 >ref|YP_001351773.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89417.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 566 Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust. Identities = 292/534 (54%), Positives = 377/534 (70%), Gaps = 9/534 (1%) Query: 4 MKIGKRLTLGFAAIMLLSIVITAIGIWRLQAVSDVTRAMVEHSARKERLISSWYGSLRAG 63 MKIG RL LGF ++ LSI I A GI +L AVS +TR+M+E KER++S W +A Sbjct: 7 MKIGARLMLGFGVVLALSIAIAADGIRQLHAVSAITRSMLELPIAKERMVSDWAAITKAS 66 Query: 64 ILRXKVRTIAISRSADPTLKTYFIDEAKASTNNSTRLQKEVGELLSSDEEKSLFQNIGER 123 I RTI +++SADP L + A + S + +++ LL++D+EK L+ I + Sbjct: 67 I----ARTIGVAKSADPALAQFSAKFAADDSKQSMEIIQKLEPLLNTDQEKELYAKILDV 122 Query: 124 RKVYLASHYRILDLKSAGNVEEGNRLLDQEFVPLARSYQDSMLKLLELEQRDIDKTTQQI 183 RK +LA ++ LK+ G E + D F+P A S+++ + +ELE++ +D T Q+ Sbjct: 123 RKSFLAGREGVMKLKTEGKEAEAAKYFDTTFLPAADSFKNHFTEFVELERKQMDAGTAQL 182 Query: 184 DDIAAGSRRLLLILEGLSLLLGCFCAWYLTVGITRPINAALGISRRVAAGDLTTQVSGGD 243 D+ A S R L++L + L G FCAW LT+GITRP+ A+ +RRVA GDLT + Sbjct: 183 SDVEAASTRQLMLLSAMVLAFGIFCAWRLTIGITRPLKTAVDAARRVAGGDLTNDIKA-- 240 Query: 244 GKSADEVGQLLSSLNDMNGSLRNIVSNVRQGTNTIAVASAEISVGNHDLSARTEQQASAL 303 +S DE GQLL++L DMN L+ IV VR GT TI AS EI+ GN DLS+RTEQQAS+L Sbjct: 241 -ESKDECGQLLAALKDMNDGLQRIVGEVRLGTETITTASNEIAAGNLDLSSRTEQQASSL 299 Query: 304 EETASAMEELISTVRQNADNADTASRLAAAASGIAVEGGEVVGRVVTTMSAINGSSRKIV 363 EETAS+MEEL STV+QNADNA A++LA +AS +A++GG+VV +VV TMS+IN SSRKIV Sbjct: 300 EETASSMEELTSTVKQNADNARQANQLAVSASEVALKGGDVVSQVVQTMSSINESSRKIV 359 Query: 364 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKLLID 423 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRSA+AAKEIK LI Sbjct: 360 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSASAAKEIKALIG 419 Query: 424 DSVKTVGEGGVLVEQAGVTMERVVGSVRKVAEIVGEISLASREQASGIEQVNHAISQMDE 483 DSV V G LV +AG TM+ +V S+R+V +I+GEI+ AS+EQ++GIEQ+N AI QMD Sbjct: 420 DSVGKVDTGNKLVAEAGATMDEIVNSIRRVTDIMGEITAASQEQSAGIEQINQAIGQMDH 479 Query: 484 MTQQNAALVEQAAAAASSMQTQAASLAQLVSVFSLDHG--ARPAASLGSQSLAP 535 +TQQNA+LVE+AAAAA SMQ QA L Q+V F LD+ A P + G LAP Sbjct: 480 VTQQNASLVEEAAAAAESMQDQARKLGQVVGAFKLDNAQEANPPRASGVTRLAP 533 >ref|YP_522203.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] gb|ABD68672.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] Length = 552 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 279/531 (52%), Positives = 371/531 (69%), Gaps = 8/531 (1%) Query: 4 MKIGKRLTLGFAAIMLLSIVITAIGIWRLQAVSDVTRAMVEHSARKERLISSWYGSLRAG 63 +KIG RL LGFA ++ +I+ I IW L AV+ R M++ KER IS W + Sbjct: 7 LKIGPRLGLGFALVLAFVALISGIAIWELHAVAQEARQMMQEPLAKERHISEWSRVINVA 66 Query: 64 ILRXKVRTIAISRSADPTLKTYFIDEAKASTNNSTRLQKEVGELLSSDEEKSLFQNIGER 123 + +RT AI++S+DP L ++F A +T + L K + +++S+EEK LF I + Sbjct: 67 V----IRTSAIAKSSDPALVSFFAANAAETTKIAADLHKVIEPMMTSNEEKKLFSTISKV 122 Query: 124 RKVYLASHYRILDLKSAGNVEEGNRLLDQEFVPLARSYQDSMLKLLELEQRDIDKTTQQI 183 R+ YLAS ++ LK+ G +E N L++ FVP++ SY + +LLE++++ +D+ QI Sbjct: 123 RQDYLASRNQVGKLKAEGKSDEANDTLEKAFVPISESYIKLVGELLEVQRKTLDQKASQI 182 Query: 184 DDIAAGSRRLLLILEGLSLLLGCFCAWYLTVGITRPINAALGISRRVAAGDLTTQVSGGD 243 DI SR LL L L++ +G AW LT GIT P++ A RRV+ GDL +S Sbjct: 183 SDIEQSSRTTLLALTLLTIAVGAAFAWLLTKGITGPLSDAAVALRRVSEGDLANHISP-- 240 Query: 244 GKSADEVGQLLSSLNDMNGSLRNIVSNVRQGTNTIAVASAEISVGNHDLSARTEQQASAL 303 + DE QLL L DM L ++VS VRQG+ +A+ASAEI+ GNHDLS RTEQQASAL Sbjct: 241 -QGRDETAQLLHVLKDMQTRLASVVSQVRQGSERVAIASAEIAQGNHDLSDRTEQQASAL 299 Query: 304 EETASAMEELISTVRQNADNADTASRLAAAASGIAVEGGEVVGRVVTTMSAINGSSRKIV 363 EETA++MEEL STV+QNADNA A++LA +AS +A++GG VVG+VV TM IN +SRKI Sbjct: 300 EETAASMEELSSTVKQNADNARQANQLAQSASTVAIKGGSVVGQVVETMKGINDASRKIS 359 Query: 364 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKLLID 423 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLA RSA AAKEIK+LI+ Sbjct: 360 DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAGRSADAAKEIKILIN 419 Query: 424 DSVKTVGEGGVLVEQAGVTMERVVGSVRKVAEIVGEISLASREQASGIEQVNHAISQMDE 483 SV+ V +G LV+QAGVTM VV S+++V +++GEIS AS EQ+ G+ QV A++QMD+ Sbjct: 420 TSVERVAQGTTLVDQAGVTMTEVVSSIKRVTDLMGEISAASSEQSQGVAQVGEAVTQMDQ 479 Query: 484 MTQQNAALVEQAAAAASSMQTQAASLAQLVSVFSLD-HGARPAASLGSQSL 533 TQQNAALVE+ AAAASS+ +QA L Q V+VF+L + A ++L S+S+ Sbjct: 480 ATQQNAALVEEMAAAASSLNSQAQDLVQTVAVFNLGANEAHQGSALASRSI 530 >ref|ZP_03543343.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni KF-1] gb|EED67629.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni KF-1] Length = 516 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 271/518 (52%), Positives = 367/518 (70%), Gaps = 7/518 (1%) Query: 1 MGRMKIGKRLTLGFAAIMLLSIVITAIGIWRLQAVSDVTRAMVEHSARKERLISSWYGSL 60 + ++ IG RL LGFA ++ ++VIT IGIW+L +V T+ M++ KERLIS W ++ Sbjct: 3 LTKLNIGARLGLGFAVVLAFAVVITVIGIWQLHSVGKATQQMMQEPLTKERLISDWNSNV 62 Query: 61 RAGILRXKVRTIAISRSADPTLKTYFIDEAKASTNNSTRLQKEVGELLSSDEEKSLFQNI 120 + RT AI++S+D +L + +A A+T ++ + K++ L+S E+ + I Sbjct: 63 SVAV----ARTTAIAKSSDASLVQFLAADAAATTKSTANVLKQIEPLISEPAEREILDRI 118 Query: 121 GERRKVYLASHYRILDLKSAGNVEEGNRLLDQEFVPLARSYQDSMLKLLELEQRDIDKTT 180 + RK YLAS ++ LK+ G EE L +VP A+SY + +LL L++ +D Sbjct: 119 MQVRKTYLASRDKVSQLKADGMAEEAESTLINSYVPAAQSYLKLLGELLNLQRTSLDAKA 178 Query: 181 QQIDDIAAGSRRLLLILEGLSLLLGCFCAWYLTVGITRPINAALGISRRVAAGDLTTQVS 240 +++ I + S+ L+L L+L +G AW LT GIT P+ A+G++RRVA GDLT Q+ Sbjct: 179 AEVEQIESNSKTYFLVLALLALAIGTASAWRLTQGITAPLKHAVGVARRVADGDLTAQI- 237 Query: 241 GGDGKSADEVGQLLSSLNDMNGSLRNIVSNVRQGTNTIAVASAEISVGNHDLSARTEQQA 300 S+DE GQL+ +L+DMN SL +V VRQGT++IA AS +I+ GNHDLSARTE+QA Sbjct: 238 --QVNSSDETGQLMQALHDMNTSLDRLVGQVRQGTDSIATASGQIAAGNHDLSARTEEQA 295 Query: 301 SALEETASAMEELISTVRQNADNADTASRLAAAASGIAVEGGEVVGRVVTTMSAINGSSR 360 S+L++TA++ME+L STV+QNADNA A++LA +AS +AV+GG VV +VV TM AI+ SSR Sbjct: 296 SSLQQTAASMEQLTSTVKQNADNASQANQLALSASDVAVKGGMVVSQVVETMGAISHSSR 355 Query: 361 KIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKL 420 KI DII VID IAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLA RSA AAKEIKL Sbjct: 356 KISDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAGRSAEAAKEIKL 415 Query: 421 LIDDSVKTVGEGGVLVEQAGVTMERVVGSVRKVAEIVGEISLASREQASGIEQVNHAISQ 480 LI SV V EG V V QAG TM+ +V SV++V +I+GEI+ AS EQ SGIEQ+N A+++ Sbjct: 416 LIQASVTKVEEGSVQVSQAGQTMDEIVSSVQRVTDIMGEITAASHEQTSGIEQINRAVAE 475 Query: 481 MDEMTQQNAALVEQAAAAASSMQTQAASLAQLVSVFSL 518 MD +TQQNAALVE++ AAA SMQ Q + L+++VSVF L Sbjct: 476 MDLVTQQNAALVEESTAAAQSMQQQTSDLSRMVSVFRL 513