BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0245.p (341 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001098458.1| arginyl-tRNA synthetase [Herminiimonas arsen... 170 3e-40 ref|YP_001351803.1| arginyl-tRNA synthetase [Janthinobacterium s... 136 6e-30 ref|YP_004754920.1| arginyl-tRNA synthetase [Collimonas fungivor... 131 1e-28 ref|ZP_08272796.1| Arginyl-tRNA synthetase [Oxalobacteraceae bac... 130 3e-28 ref|YP_003777731.1| arginyl-tRNA synthetase [Herbaspirillum sero... 130 4e-28 >ref|YP_001098458.1| arginyl-tRNA synthetase [Herminiimonas arsenicoxydans] sp|A4G1E2.1|SYR_HERAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS emb|CAL60329.1| putative arginyl-tRNA synthetase (ArgS) [Herminiimonas arsenicoxydans] Length = 577 Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 117/300 (39%), Positives = 145/300 (48%), Gaps = 62/300 (20%) Query: 35 RPLRSHARPTKTTHHRIIPGRRPRPXREELISSADIAGPGFINLRVADAAKQAVVKVVLA 94 +PL+ + R ++ P +LI SA+IAGPGFINLR+ A++Q+VVK VL Sbjct: 53 KPLKKNPREVAQV---LVAALLDNPANRDLIESAEIAGPGFINLRLTPASRQSVVKTVLQ 109 Query: 95 EGAQYGKSQAGAPPLFFCADRRFRPDANDYAGASARSVAWRHRLQPGHATGQAAQEEPAR 154 +GAQYGKS GA P TG P Sbjct: 110 QGAQYGKSNLGAGKKVIIEFVSANP------------------------TG------PLH 139 Query: 155 TGPGAGGWRAVAARSRRTDFRSSTTSLSKGGNLGARRCWSNSFPPIRPVRCTSATAVRAR 214 G G R+ + +SL R + + ++ ++ RAR Sbjct: 140 VGHG-----------RQGALGDAMSSLFDAQGYAVTREFYYNDAGVQIATLATSVQARAR 188 Query: 215 SATPCRRCCSRRATTSRASSTTTTPIADDFKAKKTVSAHIADDFKAKKTVSASDGEPATA 274 P A + IA+DF A KKTVSASDG P TA Sbjct: 189 GLKPGAEGWPESAY----NGDYIQDIANDFLA--------------KKTVSASDGLPVTA 230 Query: 275 SGDVEDLESIRRFAVAYLRREQDLDLQAFGVRFDNYYLESSLYTEGKVAAAVDALIKAGK 334 SGD++D+ESIR FAVAYLRREQDLDLQAFGV+FDNYYLESSLY +GKVAA VDALIKA K Sbjct: 231 SGDIDDIESIRAFAVAYLRREQDLDLQAFGVKFDNYYLESSLYNDGKVAATVDALIKADK 290 >ref|YP_001351803.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille] sp|A6SU56.1|SYR_JANMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gb|ABR88723.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 577 Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 64/81 (79%), Positives = 72/81 (88%) Query: 254 IADDFKAKKTVSASDGEPATASGDVEDLESIRRFAVAYLRREQDLDLQAFGVRFDNYYLE 313 IA+DF AKKTVSAS+GEP TASGD+ D+ESIR+F+V YLRREQDLDLQAFGV+FDNYYLE Sbjct: 210 IANDFLAKKTVSASNGEPVTASGDINDIESIRQFSVTYLRREQDLDLQAFGVKFDNYYLE 269 Query: 314 SSLYTEGKVAAAVDALIKAGK 334 SSLY +GKV VDALIKA K Sbjct: 270 SSLYADGKVEKTVDALIKADK 290 >ref|YP_004754920.1| arginyl-tRNA synthetase [Collimonas fungivorans Ter331] gb|AEK64097.1| Arginyl-tRNA synthetase [Collimonas fungivorans Ter331] Length = 585 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/82 (75%), Positives = 71/82 (86%) Query: 252 AHIADDFKAKKTVSASDGEPATASGDVEDLESIRRFAVAYLRREQDLDLQAFGVRFDNYY 311 A IA DF +KTV+ASDGEP TASGD+ D+ES+R+FAV YLRREQDLDLQAFGV+FDNYY Sbjct: 208 ADIAKDFLTQKTVAASDGEPVTASGDISDIESVRKFAVTYLRREQDLDLQAFGVKFDNYY 267 Query: 312 LESSLYTEGKVAAAVDALIKAG 333 LE+SLY +GKV AAVDAL AG Sbjct: 268 LETSLYKDGKVNAAVDALKAAG 289 >ref|ZP_08272796.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33727.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 553 Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/81 (80%), Positives = 71/81 (87%) Query: 254 IADDFKAKKTVSASDGEPATASGDVEDLESIRRFAVAYLRREQDLDLQAFGVRFDNYYLE 313 IA DF A KTVSA+D P ASGDV+DL+SIR+F VAYLRREQDLDLQAFGV+FDNYYLE Sbjct: 181 IALDFLAGKTVSAADCAPVIASGDVDDLDSIRQFGVAYLRREQDLDLQAFGVKFDNYYLE 240 Query: 314 SSLYTEGKVAAAVDALIKAGK 334 SSLY +GKV AAVDALIKAGK Sbjct: 241 SSLYGDGKVHAAVDALIKAGK 261 >ref|YP_003777731.1| arginyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ65823.1| arginyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 577 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 119/300 (39%), Positives = 145/300 (48%), Gaps = 62/300 (20%) Query: 35 RPLRSHARPTKTTHHRIIPGRRPRPXREELISSADIAGPGFINLRVADAAKQAVVKVVLA 94 +PL+ + R I+ P RE+L+ S +IAGPGFINLRVA AAKQAVVKV+ Sbjct: 53 KPLKKNPRELAQA---IVAAVMADPAREDLVESVEIAGPGFINLRVAAAAKQAVVKVIHE 109 Query: 95 EGAQYGKSQAGAPPLFFCADRRFRPDANDYAGASARSVAWRHRLQPGHATGQAAQEEPAR 154 +G YG+ AGA P TG P Sbjct: 110 QGEAYGRGSAGAGKKVLVEFVSANP------------------------TG------PLH 139 Query: 155 TGPGAGGWRAVAARSRRTDFRSSTTSLSKGGNLGARRCWSNSFPPIRPVRCTSATAVRAR 214 G G R+ + +SL + R + + ++ ++ RAR Sbjct: 140 VGHG-----------RQGALGDALSSLLEAQGYDVLREFYYNDAGVQIATLATSVQARAR 188 Query: 215 SATPCRRCCSRRATTSRASSTTTTPIADDFKAKKTVSAHIADDFKAKKTVSASDGEPATA 274 P A + IA DF KK TVSASDGEP T Sbjct: 189 GFKPGDAEWPESAY----NGDYIADIARDFLDKK--------------TVSASDGEPVTG 230 Query: 275 SGDVEDLESIRRFAVAYLRREQDLDLQAFGVRFDNYYLESSLYTEGKVAAAVDALIKAGK 334 SG+V+D+ESIRRFAVAYLR EQDLDLQAFGV+FDNYYLESSLY +GKVAAAVDALI AGK Sbjct: 231 SGEVDDIESIRRFAVAYLRHEQDLDLQAFGVKFDNYYLESSLYADGKVAAAVDALIAAGK 290