BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0238.p         (198 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004754920.1| arginyl-tRNA synthetase [Collimonas fungivor...   261   4e-68
ref|ZP_08272796.1| Arginyl-tRNA synthetase [Oxalobacteraceae bac...   254   3e-66
ref|YP_003777731.1| arginyl-tRNA synthetase [Herbaspirillum sero...   249   1e-64
ref|YP_001351803.1| arginyl-tRNA synthetase [Janthinobacterium s...   249   1e-64
ref|YP_582251.1| arginyl-tRNA synthetase [Cupriavidus metallidur...   249   2e-64

>ref|YP_004754920.1| arginyl-tRNA synthetase [Collimonas fungivorans Ter331]
 gb|AEK64097.1| Arginyl-tRNA synthetase [Collimonas fungivorans Ter331]
          Length = 585

 Score =  261 bits (667), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 125/150 (83%), Positives = 131/150 (87%), Gaps = 1/150 (0%)

Query: 1   LIKAGKTYELDGALWLKTTDYGDDKDRVMKKGDGTYTYFVPDVAYHITKWQRGFGKVINI 60
           L  AG TYELDGALWL+TTDYGDDKDRVMKK DGTYTYFVPDVAYH+ KWQRGFGKVIN+
Sbjct: 285 LKAAGVTYELDGALWLRTTDYGDDKDRVMKKTDGTYTYFVPDVAYHVVKWQRGFGKVINV 344

Query: 61  QGSDHHGTIARVRAGLQAANVGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTLRDL 120
           QGSDHHGTIARVRAGLQA N+GIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTLRDL
Sbjct: 345 QGSDHHGTIARVRAGLQAVNLGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTLRDL 404

Query: 121 IEWSNGSNDDNAAEAGDTDDA-GDLTRGRD 149
           IEWS G +       GD  D+  DLTRGRD
Sbjct: 405 IEWSAGEDSAADGAQGDAQDSLRDLTRGRD 434


>ref|ZP_08272796.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF33727.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 553

 Score =  254 bits (650), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 124/149 (83%), Positives = 131/149 (87%), Gaps = 2/149 (1%)

Query: 1   LIKAGKTYELDGALWLKTTDYGDDKDRVMKKGDGTYTYFVPDVAYHITKWQRGFGKVINI 60
           LIKAGKTYELDGALWL+TTDYGDDKDRVMKK DGTYTYFVPDVAYHI KWQRGFG  INI
Sbjct: 256 LIKAGKTYELDGALWLRTTDYGDDKDRVMKKSDGTYTYFVPDVAYHIVKWQRGFGNAINI 315

Query: 61  QGSDHHGTIARVRAGLQAANVGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTLRDL 120
           QGSDHHGTIARVRAGLQA ++GIP+GYPDYVLHKMVTVMK+GEEVKISKRAGSYVTLRDL
Sbjct: 316 QGSDHHGTIARVRAGLQAVDLGIPKGYPDYVLHKMVTVMKDGEEVKISKRAGSYVTLRDL 375

Query: 121 IEWSNGSNDDNAAEAGDTDDAGDLTRGRD 149
           IEWS+G  +     A D     DLTRGRD
Sbjct: 376 IEWSSGEVEVVTDAANDA--PRDLTRGRD 402


>ref|YP_003777731.1| arginyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gb|ADJ65823.1| arginyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 577

 Score =  249 bits (637), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 121/145 (83%), Positives = 125/145 (86%), Gaps = 8/145 (5%)

Query: 5   GKTYELDGALWLKTTDYGDDKDRVMKKGDGTYTYFVPDVAYHITKWQRGFGKVINIQGSD 64
           GKTYE DGALWL+TTDYGDDKDRVMKK DGTYTYFVPDVAYHI KWQRG+GKVINIQGSD
Sbjct: 289 GKTYEQDGALWLRTTDYGDDKDRVMKKTDGTYTYFVPDVAYHINKWQRGYGKVINIQGSD 348

Query: 65  HHGTIARVRAGLQAANVGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTLRDLIEWS 124
           HHGTIARVRAGLQAA VGIPQGYPDYVLHKMVTVM+NGEEVKISKRAGSYVTLRDLIEWS
Sbjct: 349 HHGTIARVRAGLQAAGVGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWS 408

Query: 125 NGSNDDNAAEAGDTDDAGDLTRGRD 149
            G   +            DLTRGRD
Sbjct: 409 AGEPVEGQER--------DLTRGRD 425


>ref|YP_001351803.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 sp|A6SU56.1|SYR_JANMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gb|ABR88723.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 577

 Score =  249 bits (637), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 120/149 (80%), Positives = 127/149 (85%), Gaps = 8/149 (5%)

Query: 1   LIKAGKTYELDGALWLKTTDYGDDKDRVMKKGDGTYTYFVPDVAYHITKWQRGFGKVINI 60
           LIKA KTYELDGALWL+TTDY DDKDRVMKK DGTYTYFVPDVAYH  KWQRGF + IN+
Sbjct: 285 LIKADKTYELDGALWLRTTDYRDDKDRVMKKSDGTYTYFVPDVAYHTVKWQRGFTQAINV 344

Query: 61  QGSDHHGTIARVRAGLQAANVGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTLRDL 120
           QGSDHHGTIARVRAGLQA ++GIPQGYPDYVLHKMVTVM+NGEEVKISKRAGSYVTLRDL
Sbjct: 345 QGSDHHGTIARVRAGLQALDIGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDL 404

Query: 121 IEWSNGSNDDNAAEAGDTDDAGDLTRGRD 149
           IEWSNG   D         +  DLTRGRD
Sbjct: 405 IEWSNGEVVDG--------EVRDLTRGRD 425


>ref|YP_582251.1| arginyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 sp|Q1LS94.1|SYR_RALME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gb|ABF06982.1| Arginyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 602

 Score =  249 bits (636), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 120/151 (79%), Positives = 128/151 (84%), Gaps = 2/151 (1%)

Query: 1   LIKAGKTYELDGALWLKTTDYGDDKDRVMKKGDGTYTYFVPDVAYHITKWQRGFGKVINI 60
           LI  GKTYE +GALWL+TTD GDDKDRVMKKGDGTYTYFVPDVAYH TKW+RGF KVIN+
Sbjct: 285 LIAKGKTYESEGALWLRTTDDGDDKDRVMKKGDGTYTYFVPDVAYHTTKWERGFSKVINV 344

Query: 61  QGSDHHGTIARVRAGLQAANVGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTLRDL 120
           QGSDHHGTIARVRAGLQ  ++GIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVT+RDL
Sbjct: 345 QGSDHHGTIARVRAGLQGLDIGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDL 404

Query: 121 IEWSNGSNDD--NAAEAGDTDDAGDLTRGRD 149
           IEWSNG  +      EAG  D     TRGRD
Sbjct: 405 IEWSNGGEETIRGCLEAGVADWPAHFTRGRD 435