BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0228.p (252 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002801133.1| FecR family anti-sigma factor protein [Azoto... 197 2e-48 ref|YP_004378080.1| anti-sigma factor protein, FecR family [Pseu... 170 2e-40 ref|YP_002258451.1| iron transport-sensory transduction protein ... 166 4e-39 ref|ZP_03585336.1| sigma factor regulatory protein, FecR/PupR fa... 159 5e-37 ref|YP_003744486.1| iron transport-sensory transduction protein ... 158 7e-37 >ref|YP_002801133.1| FecR family anti-sigma factor protein [Azotobacter vinelandii DJ] gb|ACO80158.1| Anti-sigma factor protein, FecR family [Azotobacter vinelandii DJ] Length = 264 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 106/220 (48%), Positives = 136/220 (61%) Query: 18 LLLSTGAAWLIDPAYDTRQITTAVGETSMLTMADGSRIQLNTDSELRIESRLFSRRMTLL 77 +LL GA W++DPA+ T I TAVGE + +ADGS LNT S LR+ESRL SRR+ L+ Sbjct: 40 MLLLAGAVWMLDPAWRTEDIRTAVGERGTIRLADGSEAILNTGSHLRVESRLRSRRLELV 99 Query: 78 RGEAGFDVAHTYRSFVVEANHTTVTDIGTVFDVRNEEDGARVSVQQGAVEVRSDSGQSQI 137 RGEAGF VAH + F+V + V DIGTVF VR++ G VSV +G VEV + Sbjct: 100 RGEAGFSVAHASKPFIVRSQGVEVRDIGTVFTVRSDGRGVLVSVVEGTVEVSGRQTPVRR 159 Query: 138 LAANQALRSTAGKLERLADPEPGQSGAWQRGKLYFNGTPLREAAADMQRYLAQPIVPADA 197 L Q +R+ + +P AWQRGKL F+GTPL EA D+QRY P+ +A Sbjct: 160 LETGQQVRAGREGIGATRRIDPDAVTAWQRGKLRFDGTPLGEAIVDIQRYRQAPVRLGEA 219 Query: 198 RTGDLRLSGEYDIKDIDDLLRVLPTILPVTVKRGASGVVI 237 R LRLSGEYD I+ L+ +LP ILPV++ RG G V+ Sbjct: 220 RLASLRLSGEYDTDAIESLIDLLPAILPVSLVRGGDGTVV 259 >ref|YP_004378080.1| anti-sigma factor protein, FecR family [Pseudomonas mendocina NK-01] gb|AEB56328.1| anti-sigma factor protein, FecR family [Pseudomonas mendocina NK-01] Length = 280 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 131/223 (58%), Gaps = 2/223 (0%) Query: 14 MAAILLLSTGAAWLIDPAYDTRQITTAVGETSMLTMADGSRIQLNTDSELRIESRLFSRR 73 +A +LL T W DP++ + + TAVG+ L +ADGSR+ LN+ + LRIE RL SR+ Sbjct: 55 LATVLLGFT--VWSFDPSWHSEDVRTAVGQRDSLQLADGSRVVLNSATHLRIERRLRSRQ 112 Query: 74 MTLLRGEAGFDVAHTYRSFVVEANHTTVTDIGTVFDVRNEEDGARVSVQQGAVEVRSDSG 133 + LL GEA F V H + F+V + V DIGTVF+VR++ G V+V +G VEV + Sbjct: 113 IELLSGEATFTVEHGDKPFIVRSQDVAVRDIGTVFNVRSDSRGVAVAVLEGEVEVSTRQS 172 Query: 134 QSQILAANQALRSTAGKLERLADPEPGQSGAWQRGKLYFNGTPLREAAADMQRYLAQPIV 193 Q L Q + AG++ + AWQ GKL F+GTPL E AD+QRY P+ Sbjct: 173 APQRLQGGQQALAHAGRVGAGEVANMERVTAWQHGKLRFDGTPLSEVIADIQRYRQAPVR 232 Query: 194 PADARTGDLRLSGEYDIKDIDDLLRVLPTILPVTVKRGASGVV 236 AD R LR+SGE+D ++ LL +LP ILPV + R G V Sbjct: 233 LADPRLASLRVSGEFDSDAVESLLDLLPVILPVALMRSDDGSV 275 >ref|YP_002258451.1| iron transport-sensory transduction protein [Ralstonia solanacearum IPO1609] emb|CAQ60373.1| iron transport-sensory transduction protein [Ralstonia solanacearum IPO1609] Length = 285 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 104/220 (47%), Positives = 135/220 (61%), Gaps = 6/220 (2%) Query: 20 LSTGAAWLIDPAYDTRQITTAVGETSMLTMADGSRIQLNTDSELRIESRLFSRRMTLLRG 79 L+ A WL +PA +T ++ TAVGE ++ DG+RIQLNT+S +E+RL RR+ L +G Sbjct: 60 LAVAALWLANPAVETVRLATAVGEQQAWSLRDGTRIQLNTNSVAVLENRLRGRRLRLEQG 119 Query: 80 EAGFDVAHTYRSFVVEANHTTVTDIGTVFDVRNEEDGARVSVQQGAVEVRSDSGQSQI-L 138 E VAH +RSF V A + + DIGTVF+VR D V+V +GAVEVR + + I L Sbjct: 120 ETMVTVAHGWRSFAVVAGDSDILDIGTVFNVRRNRDDVDVAVIRGAVEVRPNPQDAAIRL 179 Query: 139 AANQALRSTAGKLERLADPEPGQSG--AWQRGKLYFNGTPLREAAADMQRYLAQPIVPAD 196 + QAL A + R P + G AW GKL +GTPLR+ ADMQRY + PI D Sbjct: 180 SGGQAL---AIRQSRAGQPVALRVGAVAWANGKLVLDGTPLRDVVADMQRYRSAPIRLRD 236 Query: 197 ARTGDLRLSGEYDIKDIDDLLRVLPTILPVTVKRGASGVV 236 AR DLRLSGEY+I I+ LL LP +LPV V R A + Sbjct: 237 ARAADLRLSGEYNITGIESLLDALPAVLPVCVARHADNSI 276 >ref|ZP_03585336.1| sigma factor regulatory protein, FecR/PupR family [Burkholderia multivorans CGD1] gb|EED99927.1| sigma factor regulatory protein, FecR/PupR family [Burkholderia multivorans CGD1] Length = 324 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 94/228 (41%), Positives = 135/228 (59%), Gaps = 3/228 (1%) Query: 15 AAILLLSTGAAWLIDPAYDTRQITTAVGETSMLTMADGSRIQLNTDSELRIESRLFSRRM 74 A +LL + W+++P ++ + T VGE + + DGS + LNTD+EL +RL SR Sbjct: 94 AVVLLGAVSTLWVVNPILTSQHVRTTVGEHVEVALDDGSHVTLNTDTELTFVNRLRSREA 153 Query: 75 TLLRGEAGFDVAHTY-RSFVVEANHTTVTDIGTVFDVRNEEDGARVSVQQGAVEVRSDSG 133 T+ RGEA F VAH+ RSF V A V DIGT F VR DG V+V +G VE+ + +G Sbjct: 154 TIQRGEALFSVAHSLVRSFDVAAGTANVRDIGTRFTVRKMADGVDVAVLEGQVELTASAG 213 Query: 134 QSQI-LAANQALRST-AGKLERLADPEPGQSGAWQRGKLYFNGTPLREAAADMQRYLAQP 191 + + L A QA R+ G +E + +W+ +L FNGTPLR+ ++QRY QP Sbjct: 214 AAPVALLAGQAARADRVGNVELQDQQQFDAMVSWKDNRLQFNGTPLRDVVREVQRYRKQP 273 Query: 192 IVPADARTGDLRLSGEYDIKDIDDLLRVLPTILPVTVKRGASGVVISA 239 IV ADAR GD R++G + D D LL+ L +++PVTV+ +G + A Sbjct: 274 IVLADARVGDYRVTGGFSSADPDLLLKTLSSVVPVTVEFQRAGTAVIA 321 >ref|YP_003744486.1| iron transport-sensory transduction protein (fecr) [Ralstonia solanacearum CFBP2957] emb|CBJ41842.1| putative iron transport-sensory transduction protein (fecR) [Ralstonia solanacearum CFBP2957] Length = 274 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 90/229 (39%), Positives = 131/229 (57%), Gaps = 4/229 (1%) Query: 8 PCAXATMAAILLLSTGAAWLIDPAYDTRQITTAVGETSMLTMADGSRIQLNTDSELRIES 67 P A M A+L GA DPA+ T++ TA G + ++DG+ + LNT + +E Sbjct: 41 PLIVAGMVAVL----GALLWADPAFHTQRYATAAGARQQIDLSDGTAVTLNTRTVAEVEW 96 Query: 68 RLFSRRMTLLRGEAGFDVAHTYRSFVVEANHTTVTDIGTVFDVRNEEDGARVSVQQGAVE 127 L SR++ L+ GEA FDVA ++ F+V A T V +GT F+VR + V+V +G V Sbjct: 97 HLRSRQVQLVEGEALFDVARAWQPFIVRAGGTKVRVVGTAFNVRRADPRVTVTVLRGRVH 156 Query: 128 VRSDSGQSQILAANQALRSTAGKLERLADPEPGQSGAWQRGKLYFNGTPLREAAADMQRY 187 V SG + +L QA + AG L +P+P + AW+ GKL F+ TPL +A AD+ RY Sbjct: 157 VEDASGDAVLLGPRQAADTGAGTLNAHTEPDPAAAVAWKDGKLLFDHTPLAQAVADINRY 216 Query: 188 LAQPIVPADARTGDLRLSGEYDIKDIDDLLRVLPTILPVTVKRGASGVV 236 P+ AD G L++SG +D D LL +LP+ILPVT++R A + Sbjct: 217 RVAPVTLADPALGRLQISGVFDNARTDTLLDLLPSILPVTIRREADDAI 265