BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0212.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001895639.1| AraC family transcriptional regulator [Burkh... 446 e-123 ref|YP_558820.1| AraC family transcriptional regulator [Burkhold... 441 e-122 ref|ZP_06842012.1| transcriptional regulator, AraC family [Burkh... 437 e-121 ref|YP_004751327.1| AraC family transcriptional regulator [Colli... 436 e-120 ref|YP_004212697.1| AraC family transcriptional regulator [Rahne... 432 e-119 >ref|YP_001895639.1| AraC family transcriptional regulator [Burkholderia phytofirmans PsJN] gb|ACD16415.1| transcriptional regulator, AraC family [Burkholderia phytofirmans PsJN] Length = 315 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 216/302 (71%), Positives = 253/302 (83%) Query: 1 MVELLAALTPLEGYNLSPLADVRFLRSNRPLKRMPVLYEPGIVIVAQGRKRGYLGSEVYL 60 MV LL L PLEGYNL+ L DVRFLRSNRPL R PVLY+PG+VIV QGRKRG+LG VY+ Sbjct: 14 MVALLENLAPLEGYNLTVLPDVRFLRSNRPLSRTPVLYDPGVVIVCQGRKRGFLGETVYV 73 Query: 61 YDAQHYLAVSVPVPFSMETDASEKEPMLAIYLRLDFKVAAELMMQIDDCVGPSAAKPRGM 120 YDAQHYLAVSVPVPFSMET+ASE EP+LAIY RLDFK+AA+LM+Q+D+ A+PRGM Sbjct: 74 YDAQHYLAVSVPVPFSMETEASEAEPLLAIYFRLDFKLAADLMLQLDERDAGVPAEPRGM 133 Query: 121 VSTPMETELGISVLRFLEAMNDPLEAEVLGPSLRREIYFRVLTGQQGGTMRAALTMQGQF 180 +STP++ +L +VLRFLEAM+ PLEAE+LGP+L REIYF VLTG+QGG+MRAALT QGQF Sbjct: 134 MSTPLDPKLSATVLRFLEAMSVPLEAELLGPALVREIYFHVLTGEQGGSMRAALTAQGQF 193 Query: 181 GKISRAISMIHRSYDEALGIDQLAKEAGMSVPTFHAHFKTVTDTSPLQYLKSTRLHQARL 240 +I++ I IH Y E L I QLA EA MSVP+FH+HFK VT TSP+QYLKSTRLHQARL Sbjct: 194 ARIAKVIRKIHACYREPLDIGQLALEANMSVPSFHSHFKAVTRTSPMQYLKSTRLHQARL 253 Query: 241 LMLRNGMTAGAACAQVGYESASQFSREFKRLFGRTPVEEVDRMRKSFALPPHEDGAQFVS 300 LM+RN +TA AC QVGYESASQFSREFKRLFGR+PVEE +RMR+SFA+PP G+ FV+ Sbjct: 254 LMVRNEVTAAHACVQVGYESASQFSREFKRLFGRSPVEEAERMRRSFAVPPPAPGSIFVA 313 Query: 301 SH 302 SH Sbjct: 314 SH 315 >ref|YP_558820.1| AraC family transcriptional regulator [Burkholderia xenovorans LB400] gb|ABE30768.1| transcriptional regulator, AraC family [Burkholderia xenovorans LB400] Length = 315 Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust. Identities = 213/302 (70%), Positives = 252/302 (83%) Query: 1 MVELLAALTPLEGYNLSPLADVRFLRSNRPLKRMPVLYEPGIVIVAQGRKRGYLGSEVYL 60 MV LL L P+EGYNL+ L DVRFLRSNRPL R PVLY+PG+VIV QGRKRG+LG VY+ Sbjct: 14 MVALLETLAPVEGYNLTVLPDVRFLRSNRPLSRTPVLYDPGVVIVCQGRKRGFLGDTVYV 73 Query: 61 YDAQHYLAVSVPVPFSMETDASEKEPMLAIYLRLDFKVAAELMMQIDDCVGPSAAKPRGM 120 YDAQHYLAVSVPVPFSMET+AS +P+LAIYLRLDFKVAA+LM+Q+D+ A+PRGM Sbjct: 74 YDAQHYLAVSVPVPFSMETEASAAKPLLAIYLRLDFKVAADLMLQLDERDAGVPAEPRGM 133 Query: 121 VSTPMETELGISVLRFLEAMNDPLEAEVLGPSLRREIYFRVLTGQQGGTMRAALTMQGQF 180 +STP++ +L +VLRFLEAM+ PLEAE+LGP+L REIYF VLTG+QGG+MRAALT QGQF Sbjct: 134 MSTPLDAKLSATVLRFLEAMSVPLEAELLGPALVREIYFHVLTGEQGGSMRAALTAQGQF 193 Query: 181 GKISRAISMIHRSYDEALGIDQLAKEAGMSVPTFHAHFKTVTDTSPLQYLKSTRLHQARL 240 +I+R I IH Y E L + QLA EA MSVPT HAHFK VT TSP+QYLKSTRLHQARL Sbjct: 194 ARIARVIRKIHACYREPLDVGQLALEANMSVPTLHAHFKAVTRTSPMQYLKSTRLHQARL 253 Query: 241 LMLRNGMTAGAACAQVGYESASQFSREFKRLFGRTPVEEVDRMRKSFALPPHEDGAQFVS 300 LM+RN +TA +A QVGYESASQFSREF+RLFGR+PVEE +RMR++FA+PP G+ FV+ Sbjct: 254 LMVRNEVTAASASVQVGYESASQFSREFRRLFGRSPVEEAERMRRTFAIPPPAPGSIFVA 313 Query: 301 SH 302 SH Sbjct: 314 SH 315 >ref|ZP_06842012.1| transcriptional regulator, AraC family [Burkholderia sp. Ch1-1] gb|EFG70237.1| transcriptional regulator, AraC family [Burkholderia sp. Ch1-1] Length = 315 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 212/302 (70%), Positives = 250/302 (82%) Query: 1 MVELLAALTPLEGYNLSPLADVRFLRSNRPLKRMPVLYEPGIVIVAQGRKRGYLGSEVYL 60 MV LL L P+EGYNL+ L DVRFLRSNRPL R PVLY+PG+VIV QGRKRG+LG VY+ Sbjct: 14 MVALLENLAPVEGYNLTILPDVRFLRSNRPLSRTPVLYDPGVVIVCQGRKRGFLGDTVYV 73 Query: 61 YDAQHYLAVSVPVPFSMETDASEKEPMLAIYLRLDFKVAAELMMQIDDCVGPSAAKPRGM 120 YDAQHYLAVSVPVPFSMET+AS +P+LAIY RLDFKVAA+LM+Q+D+ A+PRGM Sbjct: 74 YDAQHYLAVSVPVPFSMETEASAAKPLLAIYFRLDFKVAADLMLQLDERDAGVPAEPRGM 133 Query: 121 VSTPMETELGISVLRFLEAMNDPLEAEVLGPSLRREIYFRVLTGQQGGTMRAALTMQGQF 180 +STP++ +L +VLRFLEAM+ PLEAE+LGP+L REIYF VLTG+QGG+MRAALT QGQF Sbjct: 134 MSTPLDAKLSATVLRFLEAMSVPLEAELLGPALVREIYFHVLTGEQGGSMRAALTAQGQF 193 Query: 181 GKISRAISMIHRSYDEALGIDQLAKEAGMSVPTFHAHFKTVTDTSPLQYLKSTRLHQARL 240 +I+R I IH Y E L + QLA EA MSVPT H+HFK VT TSP+QYLKSTRLHQARL Sbjct: 194 ARIARVIRKIHACYREPLDVGQLALEANMSVPTLHSHFKAVTRTSPMQYLKSTRLHQARL 253 Query: 241 LMLRNGMTAGAACAQVGYESASQFSREFKRLFGRTPVEEVDRMRKSFALPPHEDGAQFVS 300 LM+RN +TA A QVGYESASQFSREFKRLFGR+PVEE +RMR++FA+PP G+ FV+ Sbjct: 254 LMVRNEVTAALASVQVGYESASQFSREFKRLFGRSPVEEAERMRRTFAIPPPAPGSIFVA 313 Query: 301 SH 302 SH Sbjct: 314 SH 315 >ref|YP_004751327.1| AraC family transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK60504.1| transcriptional regulator, AraC family [Collimonas fungivorans Ter331] Length = 315 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 208/302 (68%), Positives = 250/302 (82%), Gaps = 1/302 (0%) Query: 1 MVELLAALTPLEGYNLSPLADVRFLRSNRPLKRMPVLYEPGIVIVAQGRKRGYLGSEVYL 60 MV LL L P EGYNLS L DVRFLRSNRPL PVLYEPGIV+V QGRKRG+LG + Y+ Sbjct: 15 MVSLLTKLAPNEGYNLSHLQDVRFLRSNRPLSVTPVLYEPGIVVVCQGRKRGFLGDQTYV 74 Query: 61 YDAQHYLAVSVPVPFSMETDASEKEPMLAIYLRLDFKVAAELMMQIDDCVGPSAAKPRGM 120 YDA+HYLAVSVPVPF+METDASEK+P+LAIY RLDFK+ A+L++Q++ P A P+GM Sbjct: 75 YDARHYLAVSVPVPFTMETDASEKKPLLAIYFRLDFKMLADLLLQME-VDEPGDALPQGM 133 Query: 121 VSTPMETELGISVLRFLEAMNDPLEAEVLGPSLRREIYFRVLTGQQGGTMRAALTMQGQF 180 +T M+ ++ SVLRFLEAM++P+EA++LGP+L +EIY RVLTG QG +MRAAL +GQF Sbjct: 134 FATAMDDKMSASVLRFLEAMDEPMEAKILGPALVKEIYLRVLTGDQGASMRAALVNKGQF 193 Query: 181 GKISRAISMIHRSYDEALGIDQLAKEAGMSVPTFHAHFKTVTDTSPLQYLKSTRLHQARL 240 GKI++AI IH SY E L +DQLAKEAGMS P+FH+HFK VT TSP+QYLKSTRLHQARL Sbjct: 194 GKIAKAIKKIHASYGEKLDVDQLAKEAGMSAPSFHSHFKNVTATSPMQYLKSTRLHQARL 253 Query: 241 LMLRNGMTAGAACAQVGYESASQFSREFKRLFGRTPVEEVDRMRKSFALPPHEDGAQFVS 300 LM RNG+TA +AC +VGYESASQFSREFKRLFGRTPVEEV RM+++FALP + +VS Sbjct: 254 LMARNGLTAASACVEVGYESASQFSREFKRLFGRTPVEEVTRMKQAFALPDAGPASIYVS 313 Query: 301 SH 302 SH Sbjct: 314 SH 315 >ref|YP_004212697.1| AraC family transcriptional regulator [Rahnella sp. Y9602] gb|ADW73570.1| transcriptional regulator, AraC family [Rahnella sp. Y9602] Length = 313 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 206/302 (68%), Positives = 246/302 (81%) Query: 1 MVELLAALTPLEGYNLSPLADVRFLRSNRPLKRMPVLYEPGIVIVAQGRKRGYLGSEVYL 60 M+ LL LTP EGYNL+ LADVRFLRSNRPL R PVLYEPGIVIV QGRKRG+LG++VYL Sbjct: 12 MIVLLDQLTPHEGYNLTTLADVRFLRSNRPLLRTPVLYEPGIVIVVQGRKRGFLGNDVYL 71 Query: 61 YDAQHYLAVSVPVPFSMETDASEKEPMLAIYLRLDFKVAAELMMQIDDCVGPSAAKPRGM 120 YDAQHYL VSVPVPF+METDA+ EPMLAIYLRLDF +AAELM+Q+D P P+ M Sbjct: 72 YDAQHYLTVSVPVPFTMETDATASEPMLAIYLRLDFSLAAELMLQLDAYDAPQPESPKSM 131 Query: 121 VSTPMETELGISVLRFLEAMNDPLEAEVLGPSLRREIYFRVLTGQQGGTMRAALTMQGQF 180 VS+ M+ + VLRFL+ M PL+A++LG ++ RE+Y+RVLTG QGGT+R+ALT+QGQF Sbjct: 132 VSSLMDDAMRACVLRFLQVMASPLDAKILGRAMMRELYYRVLTGAQGGTLRSALTLQGQF 191 Query: 181 GKISRAISMIHRSYDEALGIDQLAKEAGMSVPTFHAHFKTVTDTSPLQYLKSTRLHQARL 240 GK+ +A+ +H Y L ++ LAKEAGMS+PTFH+HFKTVTDTSP+QYLKSTRLHQARL Sbjct: 192 GKVVKALRKLHAEYHSHLDVNALAKEAGMSLPTFHSHFKTVTDTSPIQYLKSTRLHQARL 251 Query: 241 LMLRNGMTAGAACAQVGYESASQFSREFKRLFGRTPVEEVDRMRKSFALPPHEDGAQFVS 300 LMLRN +TA AA AQVGYES SQFSREFKRLFG TPV EV RMR++F+LP + F+S Sbjct: 252 LMLRNNLTASAASAQVGYESVSQFSREFKRLFGLTPVREVARMRQNFSLPAPSTPSDFIS 311 Query: 301 SH 302 SH Sbjct: 312 SH 313