BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0207.p (256 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776036.1| branched-chain amino acid ABC transporter AT... 465 e-129 ref|YP_004753576.1| urea ABC transporter ATPase protein UrtD [Co... 458 e-127 ref|ZP_08276250.1| Urea ABC transporter, ATPase protein UrtD [Ox... 444 e-123 gb|AEA83420.1| branched-chain amino acid ABC transporter, ATP-bi... 408 e-112 ref|YP_004355042.1| High-affinity branched-chain amino acid ABC ... 407 e-112 >ref|YP_003776036.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ64128.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 239/256 (93%), Positives = 248/256 (96%), Gaps = 1/256 (0%) Query: 1 MSNAPIGFESTDHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAAGKTTVLD 60 MS IGFES HPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGA GKTTVLD Sbjct: 1 MSENAIGFESDAHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGA-GKTTVLD 59 Query: 61 LICGKTQATSGSIRFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGR 120 LICGKT+ATSGSI+FNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGR Sbjct: 60 LICGKTRATSGSIKFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGR 119 Query: 121 KVFGALTFKRTADVVARVESVAAEIFLDQHLYTQADLLSHGQKQWLEIGMLLMQEPELLM 180 KVFGALTFKR+ DVVARVE+VAAEIFL++ L+TQADLLSHGQKQWLEIGMLLMQEPELLM Sbjct: 120 KVFGALTFKRSPDVVARVEAVAAEIFLEEQLHTQADLLSHGQKQWLEIGMLLMQEPELLM 179 Query: 181 LDEPVAGMSVSEREKTAQLLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSM 240 LDEPVAGMSVSEREKTA+LLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSM Sbjct: 180 LDEPVAGMSVSEREKTAELLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSM 239 Query: 241 DKVQSDPKVIDVYLGH 256 +KVQSDPKVIDVYLGH Sbjct: 240 EKVQSDPKVIDVYLGH 255 >ref|YP_004753576.1| urea ABC transporter ATPase protein UrtD [Collimonas fungivorans Ter331] gb|AEK62753.1| Urea ABC transporter, ATPase protein UrtD [Collimonas fungivorans Ter331] Length = 255 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 223/256 (87%), Positives = 237/256 (92%), Gaps = 1/256 (0%) Query: 1 MSNAPIGFESTDHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAAGKTTVLD 60 MS PIGFES D PVLAIEDLTVSFDGFKAVD LN YV+RNEVRVVIGPNGA GKTTVLD Sbjct: 1 MSGNPIGFESNDRPVLAIEDLTVSFDGFKAVDGLNFYVERNEVRVVIGPNGA-GKTTVLD 59 Query: 61 LICGKTQATSGSIRFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGR 120 LICGKTQAT+GSI+F N ELTKM EH IV+ GVGRKFQTPSIYENLSVFENLEMSFPRGR Sbjct: 60 LICGKTQATAGSIQFKNRELTKMREHEIVQAGVGRKFQTPSIYENLSVFENLEMSFPRGR 119 Query: 121 KVFGALTFKRTADVVARVESVAAEIFLDQHLYTQADLLSHGQKQWLEIGMLLMQEPELLM 180 KVFGAL FKRTA+VV RVE+VA EIFLD LY QADLLSHGQKQWLEIGMLLMQEPELLM Sbjct: 120 KVFGALVFKRTAEVVERVEAVAREIFLDAQLYQQADLLSHGQKQWLEIGMLLMQEPELLM 179 Query: 181 LDEPVAGMSVSEREKTAQLLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSM 240 LDEPVAGMSVSEREKTA+LLGRIS+GRSV+VIEHDM+FVKSIAHKVTVLHQGKILAEGSM Sbjct: 180 LDEPVAGMSVSEREKTAELLGRISKGRSVLVIEHDMEFVKSIAHKVTVLHQGKILAEGSM 239 Query: 241 DKVQSDPKVIDVYLGH 256 + VQ++PKVI+VYLGH Sbjct: 240 ESVQANPKVIEVYLGH 255 >ref|ZP_08276250.1| Urea ABC transporter, ATPase protein UrtD [Oxalobacteraceae bacterium IMCC9480] gb|EGF30278.1| Urea ABC transporter, ATPase protein UrtD [Oxalobacteraceae bacterium IMCC9480] Length = 255 Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust. Identities = 213/256 (83%), Positives = 235/256 (91%), Gaps = 1/256 (0%) Query: 1 MSNAPIGFESTDHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAAGKTTVLD 60 MSNAPIG ++ + PVLA+E LTVSFDGFKAVD LNLYV RNEV VVIGPNGA GKTTVLD Sbjct: 1 MSNAPIGVKNPNRPVLAVEGLTVSFDGFKAVDNLNLYVNRNEVHVVIGPNGA-GKTTVLD 59 Query: 61 LICGKTQATSGSIRFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGR 120 LICGKTQAT+GSIRFN ELTKM+E+ IVR GVGRKFQTPSIYENLSVF+NLEMSFPRGR Sbjct: 60 LICGKTQATAGSIRFNERELTKMAEYDIVRAGVGRKFQTPSIYENLSVFDNLEMSFPRGR 119 Query: 121 KVFGALTFKRTADVVARVESVAAEIFLDQHLYTQADLLSHGQKQWLEIGMLLMQEPELLM 180 VFGAL F+R+ADV+ARV VAAEIFL + L+ QADLLSHGQKQWLEIGMLLMQEPELLM Sbjct: 120 SVFGALVFERSADVIARVNEVAAEIFLSEQLHAQADLLSHGQKQWLEIGMLLMQEPELLM 179 Query: 181 LDEPVAGMSVSEREKTAQLLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSM 240 LDEPVAGMSVSER KTA+LLGRISQGRSV+VIEHDM+FVKSIAH+VTVLHQGK+LAEGSM Sbjct: 180 LDEPVAGMSVSERSKTAELLGRISQGRSVLVIEHDMEFVKSIAHRVTVLHQGKVLAEGSM 239 Query: 241 DKVQSDPKVIDVYLGH 256 + VQ++PKVI+VYLGH Sbjct: 240 ESVQANPKVIEVYLGH 255 >gb|AEA83420.1| branched-chain amino acid ABC transporter, ATP-binding protein [Pseudomonas stutzeri DSM 4166] Length = 252 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 201/253 (79%), Positives = 224/253 (88%), Gaps = 2/253 (0%) Query: 4 APIGFESTDHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAAGKTTVLDLIC 63 +P GF+S PVLAIE LTVSFDGFKAVD LNLY+ RNEVRVVIGPNGA GKTT+LDLIC Sbjct: 2 SPTGFQSP-KPVLAIEGLTVSFDGFKAVDDLNLYLDRNEVRVVIGPNGA-GKTTLLDLIC 59 Query: 64 GKTQATSGSIRFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGRKVF 123 GKT+AT+GSI FN ELT+M E IVR GVGRKFQ PSIYENLSVFENLEMS+P GRKVF Sbjct: 60 GKTRATAGSIEFNGRELTRMKEFDIVRAGVGRKFQNPSIYENLSVFENLEMSYPAGRKVF 119 Query: 124 GALTFKRTADVVARVESVAAEIFLDQHLYTQADLLSHGQKQWLEIGMLLMQEPELLMLDE 183 GAL FKR+ADV+ARVE VAAEI L L+ +A LLSHGQKQWLEIGMLLMQEPELLMLDE Sbjct: 120 GALFFKRSADVIARVEEVAAEIGLADQLHDEAGLLSHGQKQWLEIGMLLMQEPELLMLDE 179 Query: 184 PVAGMSVSEREKTAQLLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSMDKV 243 PVAGMSVSER +TA+LL RISQGRSV+VIEHDM+FVKSIAH+VTVLHQG++LAEGSM+ V Sbjct: 180 PVAGMSVSERAQTAELLKRISQGRSVLVIEHDMEFVKSIAHRVTVLHQGRLLAEGSMEAV 239 Query: 244 QSDPKVIDVYLGH 256 Q +PKV++VYLGH Sbjct: 240 QKNPKVVEVYLGH 252 >ref|YP_004355042.1| High-affinity branched-chain amino acid ABC transporter ATP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA70038.1| putative High-affinity branched-chain amino acid ABC transporter, ATP-binding component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 252 Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust. Identities = 200/251 (79%), Positives = 224/251 (89%), Gaps = 2/251 (0%) Query: 6 IGFESTDHPVLAIEDLTVSFDGFKAVDKLNLYVQRNEVRVVIGPNGAAGKTTVLDLICGK 65 +GF+ + PVL IE LTVSFDGFKAVD LNLY+ RNEVRVVIGPNGA GKTTVLDLICGK Sbjct: 4 VGFQ-MNKPVLVIEGLTVSFDGFKAVDNLNLYIDRNEVRVVIGPNGA-GKTTVLDLICGK 61 Query: 66 TQATSGSIRFNNHELTKMSEHAIVRVGVGRKFQTPSIYENLSVFENLEMSFPRGRKVFGA 125 T+ATSGSI+F+ ELTKM E+ IVR GVGRKFQ PSIYENL+VFENLEMS+P GRKVFGA Sbjct: 62 TRATSGSIQFDGKELTKMREYNIVRAGVGRKFQNPSIYENLTVFENLEMSYPAGRKVFGA 121 Query: 126 LTFKRTADVVARVESVAAEIFLDQHLYTQADLLSHGQKQWLEIGMLLMQEPELLMLDEPV 185 L FKR+A V+ARVE VA EIFL + L QADLLSHGQKQWLEIGMLLMQ P+LLMLDEPV Sbjct: 122 LFFKRSAAVIARVEEVAREIFLGELLQQQADLLSHGQKQWLEIGMLLMQNPDLLMLDEPV 181 Query: 186 AGMSVSEREKTAQLLGRISQGRSVVVIEHDMDFVKSIAHKVTVLHQGKILAEGSMDKVQS 245 AGMSV+ER +TA+LL RISQGRSV+VIEHDM+FVKSIAHKVTVLHQGK+LAEGSM+ VQ+ Sbjct: 182 AGMSVNERVQTAELLKRISQGRSVLVIEHDMEFVKSIAHKVTVLHQGKVLAEGSMESVQN 241 Query: 246 DPKVIDVYLGH 256 +PKVI+VYLGH Sbjct: 242 NPKVIEVYLGH 252