BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0206.p (399 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776037.1| branched-chain amino acid ABC transporter pe... 637 e-180 ref|ZP_08276251.1| Urea ABC transporter, permease protein UrtC [... 622 e-176 ref|ZP_03397772.1| branched-chain amino acid ABC transporter, pe... 605 e-171 ref|YP_004753577.1| urea ABC transporter permease UrtC [Collimon... 604 e-171 gb|EGH97357.1| branched-chain amino acid ABC transporter, permea... 604 e-170 >ref|YP_003776037.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ64129.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 401 Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust. Identities = 338/401 (84%), Positives = 364/401 (90%), Gaps = 2/401 (0%) Query: 1 MNAAYEKLLGGRSGLMGLLILGVLLLVVFPLGLDIFRLNLVGKYLSYAFVAVGLVLCWGY 60 MNAAYEKLLGGRSG +GLL++ LLLVVFPL LD+FRLNLVGKYLSYAFVAVGLVLCWGY Sbjct: 1 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY 60 Query: 61 GGILSLGQGVFFGVGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITSLPAMWQPF 120 GGILSLGQGVFFG+GGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQIT+LPAMW+PF Sbjct: 61 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF 120 Query: 121 HSFSFTVLAVLAVPTLLALIIGTAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 180 HSF+FT+ AVLAVPT+LA++IG AMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV Sbjct: 121 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 180 Query: 181 NGITDLKTLMGWDIRTDSAKVILYFVNAGLLFACILFGRYILTSKLGRLLMAMRDKEERV 240 NGITDLKTLMGWDIRTD AK++LYFVNAGLLF CILFGRY+L SKLGRLL+AMRDKEERV Sbjct: 181 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV 240 Query: 241 RFSGYDVASFKVFVFCVAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMS 300 RFSGYDVASFKVFVFC AAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVI+AAVGGRMS Sbjct: 241 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 300 Query: 301 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGVYEKQGKKLLANF 360 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAG+++ QGK+L+ Sbjct: 301 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL 360 Query: 361 LAKFSRKKAAPPEPAK--PKAAAKTDPTDIHLDGANLEASK 399 + + K A EP K P+ + D GA LEASK Sbjct: 361 RGEPNAKAAVAAEPLKTTPRPSTPDTKRDGIEPGATLEASK 401 >ref|ZP_08276251.1| Urea ABC transporter, permease protein UrtC [Oxalobacteraceae bacterium IMCC9480] gb|EGF30279.1| Urea ABC transporter, permease protein UrtC [Oxalobacteraceae bacterium IMCC9480] Length = 380 Score = 622 bits (1604), Expect = e-176, Method: Compositional matrix adjust. Identities = 319/376 (84%), Positives = 341/376 (90%), Gaps = 1/376 (0%) Query: 1 MNAAYEKLLGGRSGLMGLLILGVLLLVVFPLGLDIFRLNLVGKYLSYAFVAVGLVLCWGY 60 MN YEKLLGGR G +GLL+LG LL+VVFPL LD FRL LVGKYLSYAFVAVGLVLCWGY Sbjct: 1 MNTLYEKLLGGRQGAIGLLVLGALLIVVFPLLLDSFRLGLVGKYLSYAFVAVGLVLCWGY 60 Query: 61 GGILSLGQGVFFGVGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITSLPAMWQPF 120 GGILSLGQGVFFGVGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQIT LP MWQPF Sbjct: 61 GGILSLGQGVFFGVGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITELPMMWQPF 120 Query: 121 HSFSFTVLAVLAVPTLLALIIGTAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 180 HS T+L VLAVPTL+A I+G AMFKRRVGDVYFSIVTQA+AAIL+ILI+GQQGLTGGV Sbjct: 121 HSLGLTILLVLAVPTLIAFILGVAMFKRRVGDVYFSIVTQAVAAILAILIVGQQGLTGGV 180 Query: 181 NGITDLKTLMGWDIRTDSAKVILYFVNAGLLFACILFGRYILTSKLGRLLMAMRDKEERV 240 NGITDLKT++GWDIRTDSAK+ILYFV LL AC+LFGR+ILTSKLGRLLMAMRDKEERV Sbjct: 181 NGITDLKTMLGWDIRTDSAKLILYFVTVALLLACVLFGRFILTSKLGRLLMAMRDKEERV 240 Query: 241 RFSGYDVASFKVFVFCVAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMS 300 RFSGYDVASFK+FVFCVAA FSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMS Sbjct: 241 RFSGYDVASFKIFVFCVAAAFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMS 300 Query: 301 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGVYEKQGKKLLANF 360 LLGA+YGTLLVNFGKTYFSETFPELWLFLMGGLFI VVMYFPNG+AG+YE G++ +A Sbjct: 301 LLGAIYGTLLVNFGKTYFSETFPELWLFLMGGLFITVVMYFPNGIAGLYESHGRQWVAKL 360 Query: 361 LAKFSRKKAAPPEPAK 376 L K SR K A A+ Sbjct: 361 LPK-SRAKVATQATAE 375 >ref|ZP_03397772.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] ref|ZP_07233196.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] ref|ZP_07256806.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gb|EEB59291.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 391 Score = 605 bits (1559), Expect = e-171, Method: Compositional matrix adjust. Identities = 306/391 (78%), Positives = 343/391 (87%), Gaps = 3/391 (0%) Query: 1 MNAAYEKLLGGRSGLMGLLILGVLLLVVFPLGLDIFRLNLVGKYLSYAFVAVGLVLCWGY 60 MNA +KL+GGR G++GLLIL L+L+VFPL LD FRLN++GKYL+YAFVAVGLVLCWGY Sbjct: 1 MNAI-DKLMGGRQGVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGY 59 Query: 61 GGILSLGQGVFFGVGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITSLPAMWQPF 120 GGILSLGQGVFFG+GGYCMAMFLKLEASDP STKIQSTPGIPDFMDWNQIT LPA+W PF Sbjct: 60 GGILSLGQGVFFGLGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQITELPALWVPF 119 Query: 121 HSFSFTVLAVLAVPTLLALIIGTAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 180 HSF+F+V AV+AVP LLA IIGTA+FKRRVGDVYFSIVTQAIA IL++LIIGQQGLTGG+ Sbjct: 120 HSFTFSVFAVIAVPVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGI 179 Query: 181 NGITDLKTLMGWDIRTDSAKVILYFVNAGLLFACILFGRYILTSKLGRLLMAMRDKEERV 240 NGITD+KTL+GWDIR+D AK+ LYFVNAGLL CIL G++IL SKLGRLLMAMRDKEERV Sbjct: 180 NGITDIKTLLGWDIRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERV 239 Query: 241 RFSGYDVASFKVFVFCVAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMS 300 RFSGYDVA FK+FV+CVAA FSAIGGAMF LQVGFMSPSFVGIVPSIEMVI+AAVGGRMS Sbjct: 240 RFSGYDVAGFKIFVYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 299 Query: 301 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGVYEKQGKKLLANF 360 LLGAVYG+LLVN+GKTYFSE+FPELWL+LMGGLFIAVVMYFP+GLAG++E G+K L F Sbjct: 300 LLGAVYGSLLVNYGKTYFSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESHGRKWLGRF 359 Query: 361 LAKFSRKKAAPPEPAKPKAAAKTDPTDIHLD 391 K S K AP P A K P ++ Sbjct: 360 --KRSDKPVAPAIPGAGHAPVKNTPVKSSVE 388 >ref|YP_004753577.1| urea ABC transporter permease UrtC [Collimonas fungivorans Ter331] gb|AEK62754.1| Urea ABC transporter, permease protein UrtC [Collimonas fungivorans Ter331] Length = 399 Score = 604 bits (1558), Expect = e-171, Method: Compositional matrix adjust. Identities = 344/404 (85%), Positives = 366/404 (90%), Gaps = 10/404 (2%) Query: 1 MNAAYEKLLGGRSGLMGLLILGVLLLVVFPLGLDIFRLNLVGKYLSYAFVAVGLVLCWGY 60 MNAAYEKLLGGRSGL+GLLIL LLLVVFPL DIFRLNLVGKYL+YAFVAVGLVLCWGY Sbjct: 1 MNAAYEKLLGGRSGLVGLLILCGLLLVVFPLVFDIFRLNLVGKYLAYAFVAVGLVLCWGY 60 Query: 61 GGILSLGQGVFFGVGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITSLPAMWQPF 120 GGILSLGQGVFFGVGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQIT LP +WQPF Sbjct: 61 GGILSLGQGVFFGVGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITELPLLWQPF 120 Query: 121 HSFSFTVLAVLAVPTLLALIIGTAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 180 HSF FT+LAVL VPTL+AL+IG AMFKRRVGDVYFSIVTQAIAAIL+ILIIGQQGLTGGV Sbjct: 121 HSFGFTLLAVLLVPTLMALVIGAAMFKRRVGDVYFSIVTQAIAAILAILIIGQQGLTGGV 180 Query: 181 NGITDLKTLMGWDIRTDSAKVILYFVNAGLLFACILFGRYILTSKLGRLLMAMRDKEERV 240 NGITDLKTLMGWDIRTDSAK++LYFVNA LL CIL GR+IL+SKLGRLL+AMRDKEERV Sbjct: 181 NGITDLKTLMGWDIRTDSAKLVLYFVNASLLIGCILIGRFILSSKLGRLLVAMRDKEERV 240 Query: 241 RFSGYDVASFKVFVFCVAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMS 300 RFSGYDVASFKVFVFCVAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMS Sbjct: 241 RFSGYDVASFKVFVFCVAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMS 300 Query: 301 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGVYEKQGKKLLANF 360 LLGAVYGTLLVNFGKTYFSE+FPELWLFLMGGLFIAVVMYFPNGLAG+Y+ GK LL+ Sbjct: 301 LLGAVYGTLLVNFGKTYFSESFPELWLFLMGGLFIAVVMYFPNGLAGLYQSHGKLLLSK- 359 Query: 361 LAKFSRKKA---APPEPAKPKAAAKTDPTD--IHLDGANLEASK 399 L+ + R++A APP AKP+ A P D I L +LE SK Sbjct: 360 LSGWQRRRASSVAPPAVAKPQPA----PADVIIELPHGSLEGSK 399 >gb|EGH97357.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 391 Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust. Identities = 306/391 (78%), Positives = 343/391 (87%), Gaps = 3/391 (0%) Query: 1 MNAAYEKLLGGRSGLMGLLILGVLLLVVFPLGLDIFRLNLVGKYLSYAFVAVGLVLCWGY 60 MNA +KL+GGR G++GLLIL L+L+VFPL LD FRLN++GKYL+YAFVAVGLVLCWGY Sbjct: 1 MNA-IDKLMGGRQGVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGY 59 Query: 61 GGILSLGQGVFFGVGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITSLPAMWQPF 120 GGILSLGQGVFFG+GGYC+AMFLKLEASDP STKIQSTPGIPDFMDWNQIT LPA+W PF Sbjct: 60 GGILSLGQGVFFGLGGYCIAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPALWVPF 119 Query: 121 HSFSFTVLAVLAVPTLLALIIGTAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 180 HSF+F+V AV+AVP LLA IIGTA+FKRRVGDVYFSIVTQAIA IL++LIIGQQGLTGG+ Sbjct: 120 HSFTFSVFAVIAVPVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGI 179 Query: 181 NGITDLKTLMGWDIRTDSAKVILYFVNAGLLFACILFGRYILTSKLGRLLMAMRDKEERV 240 NGITDLKTL+GWDIR+D AK+ LYFVNAGLL CIL G++IL SKLGRLLMAMRDKEERV Sbjct: 180 NGITDLKTLLGWDIRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERV 239 Query: 241 RFSGYDVASFKVFVFCVAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMS 300 RFSGYDVA FK+FV+CVAA FSAIGGAMF LQVGFMSPSFVGIVPSIEMVI+AAVGGRMS Sbjct: 240 RFSGYDVAGFKIFVYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 299 Query: 301 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGVYEKQGKKLLANF 360 LLGAVYG+LLVN+GKTYFSE+FPELWL+LMGGLFIAVVMYFP+GLAG++E G+K L F Sbjct: 300 LLGAVYGSLLVNYGKTYFSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESHGRKWLGRF 359 Query: 361 LAKFSRKKAAPPEPAKPKAAAKTDPTDIHLD 391 K S K AP P A K P ++ Sbjct: 360 --KRSDKPVAPAIPGAGHAPVKNTPVKSSVE 388