BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0203.p (402 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776039.1| branched-chain amino acid ABC transporter pe... 770 0.0 ref|YP_004753579.1| urea ABC transporter urea binding protein [C... 763 0.0 ref|ZP_08274366.1| Urea ABC transporter, urea binding protein [O... 747 0.0 ref|ZP_06842711.1| urea ABC transporter, urea binding protein [B... 697 0.0 ref|YP_553605.1| branched chain amino acid ABC transporter perip... 697 0.0 >ref|YP_003776039.1| branched-chain amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64131.1| ABC-type branched-chain amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 418 Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/383 (97%), Positives = 380/383 (99%) Query: 20 AQQFPTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLAIDQINSMGGILGR 79 AQQ+PTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLAIDQIN+MGGILGR Sbjct: 36 AQQYPTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLAIDQINAMGGILGR 95 Query: 80 KIKIIQEDGASDWPTFAEKAKKLLENDHVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTF 139 KIKIIQEDGASDWPTFAEKAKKLLEND VAAVFGCWTSASRKAVLPVFEKDNGLLYYPTF Sbjct: 96 KIKIIQEDGASDWPTFAEKAKKLLENDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTF 155 Query: 140 YEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLIGSDYIWPRTSNKIARKHIEN 199 YEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFL+GSDYIWPRTSNKIARKHIEN Sbjct: 156 YEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIEN 215 Query: 200 VLKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQ 259 VLKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQ Sbjct: 216 VLKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQ 275 Query: 260 NLLTISVTEDEMLGIGGENVEGFYASMKYFQSLDNPNNKKFVAEFKAKFGANSVIGDVTQ 319 NLLTISVTEDEMLGIGGENVEGF+ASMKYFQSLDN NNKKFVAEFKAKFGANSVIGDVTQ Sbjct: 276 NLLTISVTEDEMLGIGGENVEGFFASMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQ 335 Query: 320 AAYLGPWLWKAAVEKAGSFDVDKVVAASPGLELKTAPEGYVKVHANHHLWSKTRIGEAQK 379 AAYLGPWLWKAAVEKAGSFDVDKVVAASPG+ELKTAPEGYVKVH NHHLWSKTRIGEAQK Sbjct: 336 AAYLGPWLWKAAVEKAGSFDVDKVVAASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQK 395 Query: 380 DGQFKVIYESDLIEPNPFPKGYQ 402 DGQFKV+YES+LIEPNPFPKGYQ Sbjct: 396 DGQFKVVYESELIEPNPFPKGYQ 418 >ref|YP_004753579.1| urea ABC transporter urea binding protein [Collimonas fungivorans Ter331] gb|AEK62756.1| Urea ABC transporter, urea binding protein [Collimonas fungivorans Ter331] Length = 417 Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/386 (95%), Positives = 378/386 (97%) Query: 17 LAMAQQFPTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLAIDQINSMGGI 76 + AQ TAK+NTTKLA+TDTEVTVGQLHSATGTMAISETGSIQAERLAIDQIN+MGGI Sbjct: 32 IGFAQSPATAKINTTKLAVTDTEVTVGQLHSATGTMAISETGSIQAERLAIDQINAMGGI 91 Query: 77 LGRKIKIIQEDGASDWPTFAEKAKKLLENDHVAAVFGCWTSASRKAVLPVFEKDNGLLYY 136 LGRKIKIIQEDGASDWPTFAEKAKKLLE+DHVAAVFGCWTSASRKAVLPVFEKDNGLLYY Sbjct: 92 LGRKIKIIQEDGASDWPTFAEKAKKLLESDHVAAVFGCWTSASRKAVLPVFEKDNGLLYY 151 Query: 137 PTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLIGSDYIWPRTSNKIARKH 196 PTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFL+GSDYIWPRTSNKIARKH Sbjct: 152 PTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLVGSDYIWPRTSNKIARKH 211 Query: 197 IENVLKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTA 256 IENVLKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTA Sbjct: 212 IENVLKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTA 271 Query: 257 KTQNLLTISVTEDEMLGIGGENVEGFYASMKYFQSLDNPNNKKFVAEFKAKFGANSVIGD 316 KTQNLLTISVTEDEMLGIGGENVEGFY+SMKYFQSLDNPNNKKFVAEFKAKFG N+VIGD Sbjct: 272 KTQNLLTISVTEDEMLGIGGENVEGFYSSMKYFQSLDNPNNKKFVAEFKAKFGPNAVIGD 331 Query: 317 VTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGLELKTAPEGYVKVHANHHLWSKTRIGE 376 VTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPG ELK+APEGYVKVH NHHLWSKTRIGE Sbjct: 332 VTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGFELKSAPEGYVKVHPNHHLWSKTRIGE 391 Query: 377 AQKDGQFKVIYESDLIEPNPFPKGYQ 402 AQKDGQFKVIYESDLIEPNPFPKGYQ Sbjct: 392 AQKDGQFKVIYESDLIEPNPFPKGYQ 417 >ref|ZP_08274366.1| Urea ABC transporter, urea binding protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32159.1| Urea ABC transporter, urea binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 417 Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/396 (90%), Positives = 379/396 (95%) Query: 7 AAGAAMAFPGLAMAQQFPTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLA 66 A + +AFP + AQ T+K+NTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLA Sbjct: 22 AVASTLAFPVMGFAQSPATSKINTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLA 81 Query: 67 IDQINSMGGILGRKIKIIQEDGASDWPTFAEKAKKLLENDHVAAVFGCWTSASRKAVLPV 126 IDQIN+MGGILGRKIKIIQEDGASDWPTFAEKAKKLL +D VA VFGCWTSASRKAVLPV Sbjct: 82 IDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLVSDRVATVFGCWTSASRKAVLPV 141 Query: 127 FEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLIGSDYIWP 186 FEK+NGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL+W+AKEKKAKTFFL+GSDYIWP Sbjct: 142 FEKENGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGLDWIAKEKKAKTFFLVGSDYIWP 201 Query: 187 RTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFY 246 RTSNKIARKHIENV+KGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIF DVVGGSNVAFY Sbjct: 202 RTSNKIARKHIENVIKGSVVGEEYYPLGNTQFGSLINKIKLKKPDVIFTDVVGGSNVAFY 261 Query: 247 KQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFYASMKYFQSLDNPNNKKFVAEFKA 306 KQLKAAGVTAKTQ LLTISVTEDEMLGIGGENVEGFYASMKYFQSL+NPNNKKFVA+FKA Sbjct: 262 KQLKAAGVTAKTQTLLTISVTEDEMLGIGGENVEGFYASMKYFQSLENPNNKKFVADFKA 321 Query: 307 KFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGLELKTAPEGYVKVHANH 366 K+GAN+V+GDVTQAAYLGPWLWKAAVEKAGSFDVDKV+AAS GLELK APEGYVKVH NH Sbjct: 322 KYGANAVMGDVTQAAYLGPWLWKAAVEKAGSFDVDKVIAASAGLELKNAPEGYVKVHENH 381 Query: 367 HLWSKTRIGEAQKDGQFKVIYESDLIEPNPFPKGYQ 402 HLWSKTRIG+AQKDGQFKV+YES+LIEPNPFPKGYQ Sbjct: 382 HLWSKTRIGQAQKDGQFKVVYESELIEPNPFPKGYQ 417 >ref|ZP_06842711.1| urea ABC transporter, urea binding protein [Burkholderia sp. Ch1-1] gb|EFG69670.1| urea ABC transporter, urea binding protein [Burkholderia sp. Ch1-1] Length = 421 Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/398 (85%), Positives = 363/398 (91%), Gaps = 2/398 (0%) Query: 7 AAGAAMAFPGLAMAQQFPTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLA 66 AA A+A G+A AQQFPTAKVNTT LA+TDTEVTVGQLHSATGTMAISETGSIQAERLA Sbjct: 24 AAAPALAMSGIARAQQFPTAKVNTTHLAVTDTEVTVGQLHSATGTMAISETGSIQAERLA 83 Query: 67 IDQINSMGGILGRKIKIIQEDGASDWPTFAEKAKKLLENDHVAAVFGCWTSASRKAVLPV 126 I+QINS GGILGRKIKIIQEDGASDWPTFAEK+KKLLENDHVAAVFGCWTSASRKAVLP+ Sbjct: 84 IEQINSAGGILGRKIKIIQEDGASDWPTFAEKSKKLLENDHVAAVFGCWTSASRKAVLPI 143 Query: 127 FEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLIGSDYIWP 186 FE+DNGLLYYPTFYEGLEQS NVFYTGQEATQQ+L GLNW + KKAK+FFLIGSDYIWP Sbjct: 144 FERDNGLLYYPTFYEGLEQSHNVFYTGQEATQQILWGLNWANQTKKAKSFFLIGSDYIWP 203 Query: 187 RTSNKIARKHIENVLKGS-VVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAF 245 RTSNKIARKHIE L G VVGEEYYPLG T F SLINKIK+ KPD I+A +VGGSNVAF Sbjct: 204 RTSNKIARKHIEQHLTGCKVVGEEYYPLGTTNFNSLINKIKIAKPDCIYAIIVGGSNVAF 263 Query: 246 YKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFYASMKYFQSLDNPNNKKFVAEFK 305 YKQLKAAG+TA Q LLTISVTEDE+LGIGGEN GFY++MKYF+SLDN NNKKFVA FK Sbjct: 264 YKQLKAAGITADKQFLLTISVTEDEVLGIGGENFAGFYSAMKYFESLDNDNNKKFVAAFK 323 Query: 306 AKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGLELKTAPEGYVKVHAN 365 AK+G SVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPG+ELKTAPEGYVK+HAN Sbjct: 324 AKYGPKSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGIELKTAPEGYVKIHAN 383 Query: 366 HHLWSKTRIGEAQKDGQFKVIYES-DLIEPNPFPKGYQ 402 HHLWS+TRIG+AQ DGQFKV+ ES DLIEPNPFPKGYQ Sbjct: 384 HHLWSRTRIGQAQVDGQFKVVAESPDLIEPNPFPKGYQ 421 >ref|YP_553605.1| branched chain amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gb|ABE34255.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Burkholderia xenovorans LB400] Length = 421 Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/398 (84%), Positives = 363/398 (91%), Gaps = 2/398 (0%) Query: 7 AAGAAMAFPGLAMAQQFPTAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLA 66 AA A+A G+A AQQFPTAKVNTT LA+TDTEVTVGQLHSATGTMAISETGSIQAERLA Sbjct: 24 AAAPALAMSGIARAQQFPTAKVNTTHLAVTDTEVTVGQLHSATGTMAISETGSIQAERLA 83 Query: 67 IDQINSMGGILGRKIKIIQEDGASDWPTFAEKAKKLLENDHVAAVFGCWTSASRKAVLPV 126 I+QINS GGILGRKI+IIQEDGASDWPTFAEK+KKLLENDHVAAVFGCWTSASRKAVLP+ Sbjct: 84 IEQINSAGGILGRKIRIIQEDGASDWPTFAEKSKKLLENDHVAAVFGCWTSASRKAVLPI 143 Query: 127 FEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLIGSDYIWP 186 FE+DNGLLYYPTFYEGLEQS NVFYTGQEATQQ+L GLNW + KKAK+FFLIGSDYIWP Sbjct: 144 FERDNGLLYYPTFYEGLEQSHNVFYTGQEATQQILWGLNWANQTKKAKSFFLIGSDYIWP 203 Query: 187 RTSNKIARKHIENVLKGS-VVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAF 245 RTSNKIARKHIE L G VVGEEYYPLG T F SLINKIK+ KPD I+A +VGGSNVAF Sbjct: 204 RTSNKIARKHIEQHLTGCKVVGEEYYPLGTTNFNSLINKIKIAKPDCIYAIIVGGSNVAF 263 Query: 246 YKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFYASMKYFQSLDNPNNKKFVAEFK 305 YKQLKAAG+TA Q LLTISVTEDE+LGIGGEN GFY++MKYF+SLDN NNKKFVA FK Sbjct: 264 YKQLKAAGITADKQFLLTISVTEDEVLGIGGENFAGFYSAMKYFESLDNDNNKKFVAAFK 323 Query: 306 AKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGLELKTAPEGYVKVHAN 365 AK+G SVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPG+ELKTAPEGYVK+HAN Sbjct: 324 AKYGPKSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVVAASPGIELKTAPEGYVKIHAN 383 Query: 366 HHLWSKTRIGEAQKDGQFKVIYES-DLIEPNPFPKGYQ 402 HHLWS+TRIG+AQ DGQFKV+ ES DLIEPNPFPKGYQ Sbjct: 384 HHLWSRTRIGQAQVDGQFKVVAESPDLIEPNPFPKGYQ 421