BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0201.p (1030 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776040.1| sensor histidine kinase/response regulator p... 1747 0.0 ref|YP_004753580.1| two-component hybrid sensor and regulator [C... 1617 0.0 gb|AEA83416.1| sensor histidine kinase/response regulator [Pseud... 1264 0.0 ref|YP_004355046.1| histidine kinase, Hybrid [Pseudomonas brassi... 1252 0.0 ref|NP_793841.1| sensor histidine kinase/response regulator [Pse... 1214 0.0 >ref|YP_003776040.1| sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64132.1| sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1145 Score = 1747 bits (4524), Expect = 0.0, Method: Compositional matrix adjust. Identities = 856/1001 (85%), Positives = 920/1001 (91%) Query: 1 LTNPAIQRIVKVRRDYNTWVANETLEDYALRYTPRSFRRWSEFRLANTALGATSFLALEA 60 +T+PA QRIVKVRRDYNTWVANETLEDYALRYTP SFRRWSEFRLANTALGATSFLALEA Sbjct: 1 MTHPATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEA 60 Query: 61 ISGAITLSYGFTNTFWAIACVVVLFFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTVT 120 ISGAITLSYGFTN FWAIACVV+LFFLTGLPI YYAARYGVDMDLLTRGAGFGYIGST+T Sbjct: 61 ISGAITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTIT 120 Query: 121 SLIYASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSLIVIPMVAYGITLINRLQMWT 180 SLIYASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCS+I+IPMVAYGITLINRLQMWT Sbjct: 121 SLIYASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWT 180 Query: 181 QPLWIVLLTLPYICVLYKEPDALTNLITFSGRAEEGGSFNIYLFGAAATVAFSLIAQIGE 240 QPLW+VLL LPY+CVLYKEPDAL+NL++F+GRAEEG SFN+ LFGAAATVAFSLIAQ+GE Sbjct: 181 QPLWLVLLVLPYVCVLYKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQVGE 240 Query: 241 QVDFLRFLPEKTQANRGRWWTALLLAGPGWILLGGAKMLGGALLAFLAVQHEVPMGKAVE 300 QVDFLRFLP+KT ANRGRWW+ALLLAGPGWILLGGAKMLGGALLAFLA+QHEVPM +AVE Sbjct: 241 QVDFLRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAVE 300 Query: 301 PTQMYLIGYQYVFSNPALVLAAVALFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGR 360 PTQMYL+GYQYVF NPAL L AV LFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGR Sbjct: 301 PTQMYLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGR 360 Query: 361 VVWLVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVSDLVINKPLKLSPAHIEF 420 VVWLVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVV+DLVINKPL+LSPAHIEF Sbjct: 361 VVWLVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHIEF 420 Query: 421 KRAHLYDINPVGVGSMAIASILSAIAMSGVLGKLAAAMSPFIALGTAMLMAPLIAIATRS 480 KRAHLYD+NPVGVG+MAIA++LS +AMSGVLGK AAM+PFIALGTA+ APLIA+AT S Sbjct: 421 KRAHLYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGS 480 Query: 481 RYYIARKDTLPEHLHTGKNSDHQHAALECVICGNQFEMPDMAHCPAYQGAICSLCCSLDA 540 RYYIAR+DTL E + L C ICGN FE PDMAHCPAYQGAICSLCCSLDA Sbjct: 481 RYYIARRDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDA 540 Query: 541 RCNDRCKTPAARLPNQVFSTLQALLPSRFTLKLNTRIGHYLIVFGLLSGGLAVVLWMLYF 600 RC DRCKTP ARLPNQ+ TL+ L+P+RF +KLNTRIGHYL VFGLL+GGLAVVLWMLYF Sbjct: 541 RCKDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWMLYF 600 Query: 601 QQMAGISGLTPSGPDSIQSIFIKLFCTLLVLIGVGSWWLILTNESRSVAHEESERQTNLL 660 QQMA +SG P S++S+FIKLFC LLV++GVG+WWL+LTNESR+VA EESERQTNLL Sbjct: 601 QQMADLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTNLL 660 Query: 661 LQEIEAHKQTDAELQRAKEAAESANLAKSRFVTGMSHELRTPLNSILGYAQILHVDATIP 720 LQEIEAHKQTDAELQRAKEAAESANLAKSRFV GMSHELRTPLNSILGYAQILHVDATIP Sbjct: 661 LQEIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIP 720 Query: 721 PARKDAIAVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALWEFLEQIAGMFAPQAE 780 PARKDAI VIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELAL FLEQI GMFAPQAE Sbjct: 721 PARKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAE 780 Query: 781 QKGLSFRFEKTGRIPHIVHADQKRLRQILINLLGNAVKFTDSGSVTVRVRYLREIAYFDI 840 QKGL FRF+K+GR+P IVHADQKRLRQILINLLGNAVKFTD G VT+R+RY REIAYFD+ Sbjct: 781 QKGLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAYFDV 840 Query: 841 IDTGIGIADDDLERIFLPFERSNAANLREDIGTGLGLAISSMLTHIMGGELAVKSKVGSG 900 IDTGIGIADDD ERIFLPFERS+AANLREDIGTGLGLAIS ML HIMGGEL+V+S+VG G Sbjct: 841 IDTGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQG 900 Query: 901 SSFHLKIYLPEVHVPRPRLKLEDQMSGYIGPSKRVLVVDDQASQRLLLKEMLLPLGFEVV 960 SSFHLKIYLPEVHVPRPR+KLEDQMSGY GPS+ +LVVDDQASQR LLK+ML+PLGF V Sbjct: 901 SSFHLKIYLPEVHVPRPRIKLEDQMSGYAGPSRHILVVDDQASQRRLLKDMLMPLGFTVS 960 Query: 961 EADGGIACLEELARGIPDLVLLDIAMPLMDGWSVARAXPGR 1001 EAD G+AC+E L +PDLVLLDIAMP MDGWSVARA R Sbjct: 961 EADSGLACMETLGHALPDLVLLDIAMPQMDGWSVARAIRAR 1001 >ref|YP_004753580.1| two-component hybrid sensor and regulator [Collimonas fungivorans Ter331] gb|AEK62757.1| Two-component hybrid sensor and regulator [Collimonas fungivorans Ter331] Length = 1181 Score = 1617 bits (4187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 799/993 (80%), Positives = 888/993 (89%), Gaps = 10/993 (1%) Query: 5 AIQRIVKVRRDYNTWVANETLEDYALRYTPRSFRRWSEFRLANTALGATSFLALEAISGA 64 A QRIVKVRRDYNTWV NETLEDYALR+TPRSFR+WSEFRLANTALGA SFLALEAISG Sbjct: 46 ATQRIVKVRRDYNTWVGNETLEDYALRFTPRSFRKWSEFRLANTALGAISFLALEAISGT 105 Query: 65 ITLSYGFTNTFWAIACVVVLFFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTVTSLIY 124 ITL+YGF N FWAI CV +LFFLTGLPISYYAA+YGVDMDLLTRGAGFGYIGST+TSLIY Sbjct: 106 ITLNYGFANAFWAIVCVSILFFLTGLPISYYAAKYGVDMDLLTRGAGFGYIGSTITSLIY 165 Query: 125 ASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSLIVIPMVAYGITLINRLQMWTQPLW 184 A+FTFIFFA+EA+IMAQAIE+YFGLPLV GY++C+L+VIP+V YGITLINRLQMWTQPLW Sbjct: 166 ATFTFIFFAVEASIMAQAIELYFGLPLVLGYIICALVVIPLVTYGITLINRLQMWTQPLW 225 Query: 185 IVLLTLPYICVLYKEPDALTNLITFSGRAEEGGSFNIYLFGAAATVAFSLIAQIGEQVDF 244 +VLL LPY+CVL+KEPDAL NL+TF+GRAE G SF++ LFG+AATVAFSLIAQIGEQVDF Sbjct: 226 LVLLVLPYVCVLHKEPDALANLMTFAGRAENGSSFDLVLFGSAATVAFSLIAQIGEQVDF 285 Query: 245 LRFLPEKTQANRGRWWTALLLAGPGWILLGGAKMLGGALLAFLAVQHEVPMGKAVEPTQM 304 LRFLPEKT ANR RWW+ALLLAGPGWILLG AKMLGGALLAFLA+QHEVP+GKAVEPTQM Sbjct: 286 LRFLPEKTSANRYRWWSALLLAGPGWILLGAAKMLGGALLAFLAIQHEVPIGKAVEPTQM 345 Query: 305 YLIGYQYVFSNPALVLAAVALFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWL 364 YLI Y+YVFS+PALVLAAV L VVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWL Sbjct: 346 YLIAYRYVFSDPALVLAAVTLLVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWL 405 Query: 365 VFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVSDLVINKPLKLSPAHIEFKRAH 424 VFNVLIA+LLME+GVFNALEHVLALY+LVAISWIGAVVSDLVINKPL LSP HIEFKRAH Sbjct: 406 VFNVLIALLLMEIGVFNALEHVLALYALVAISWIGAVVSDLVINKPLGLSPPHIEFKRAH 465 Query: 425 LYDINPVGVGSMAIASILSAIAMSGVLGKLAAAMSPFIALGTAMLMAPLIAIATRSRYYI 484 LYDINPVGVG+M IAS LSA+A+SG+ G +A A++PFIALG+A+L+AP+IA AT+ +YYI Sbjct: 466 LYDINPVGVGAMLIASALSALALSGMFGSVARALAPFIALGSALLIAPVIAYATKGKYYI 525 Query: 485 ARKDTLPEHLHTGKNSDHQHAALECVICGNQFEMPDMAHCPAYQGAICSLCCSLDARCND 544 AR D L +D H LECVICGN FE PDMAHCPAYQGAICSLCCSLDARCND Sbjct: 526 ARHDQL---------ADSHHGQLECVICGNHFETPDMAHCPAYQGAICSLCCSLDARCND 576 Query: 545 RCKTPAARLPNQVFSTLQALLPSRFTLKLNTRIGHYLIVFGLLSGGLAVVLWMLYFQQMA 604 RCK A+R+P+Q+F+TL+ LP RFTLKLNTRIGHYLIVF L+SGGLAVVLW+LY+QQ+A Sbjct: 577 RCKE-ASRMPDQIFNTLRGFLPERFTLKLNTRIGHYLIVFSLVSGGLAVVLWLLYYQQLA 635 Query: 605 GISGLTPSGPDSIQSIFIKLFCTLLVLIGVGSWWLILTNESRSVAHEESERQTNLLLQEI 664 G+SGL GPDS+ IFIKLF +LLV IGVGSWWL+LTNESRSVAHEESERQTNLLLQEI Sbjct: 636 GMSGLAGGGPDSMAGIFIKLFASLLVFIGVGSWWLVLTNESRSVAHEESERQTNLLLQEI 695 Query: 665 EAHKQTDAELQRAKEAAESANLAKSRFVTGMSHELRTPLNSILGYAQILHVDATIPPARK 724 +AH QTDA LQRAKEAAE+ANLAKSRFVTGMSHELRTPLNSILGYAQIL VD IP R+ Sbjct: 696 DAHNQTDAALQRAKEAAEAANLAKSRFVTGMSHELRTPLNSILGYAQILQVDHAIPEGRR 755 Query: 725 DAIAVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALWEFLEQIAGMFAPQAEQKGL 784 DAI VIRRSGEHLLSLIDGLLDIAKIEAGKMRLA+DEL L EFL+QI MFAPQAEQKGL Sbjct: 756 DAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLATDELPLHEFLDQIVQMFAPQAEQKGL 815 Query: 785 SFRFEKTGRIPHIVHADQKRLRQILINLLGNAVKFTDSGSVTVRVRYLREIAYFDIIDTG 844 +FRFEK GRIP +V DQKRLRQILINLLGNAVKFTD+G VT+RVR+ REI YF++ D+G Sbjct: 816 AFRFEKIGRIPEVVQVDQKRLRQILINLLGNAVKFTDAGHVTLRVRHAREITYFEVEDSG 875 Query: 845 IGIADDDLERIFLPFERSNAANLREDIGTGLGLAISSMLTHIMGGELAVKSKVGSGSSFH 904 IGIA++D+ R+FLPFERSNAANLREDIGTGLGLAISSMLTHIMGG L+V S +G GS+F Sbjct: 876 IGIAEEDIARVFLPFERSNAANLREDIGTGLGLAISSMLTHIMGGALSVASDIGKGSTFQ 935 Query: 905 LKIYLPEVHVPRPRLKLEDQMSGYIGPSKRVLVVDDQASQRLLLKEMLLPLGFEVVEADG 964 LKIYL EV PR R+KLEDQMSGY+GP KR+LVVDDQASQR +L ML PLGF++ E Sbjct: 936 LKIYLSEVRAPRRRIKLEDQMSGYLGPRKRILVVDDQASQRAVLSAMLAPLGFDISEVAS 995 Query: 965 GIACLEELARGIPDLVLLDIAMPLMDGWSVARA 997 G ACL E+AR +PD+VLLDIAMP MDG +V RA Sbjct: 996 GAACLAEIARAMPDMVLLDIAMPAMDGGAVCRA 1028 >gb|AEA83416.1| sensor histidine kinase/response regulator [Pseudomonas stutzeri DSM 4166] Length = 1135 Score = 1264 bits (3272), Expect = 0.0, Method: Compositional matrix adjust. Identities = 629/991 (63%), Positives = 769/991 (77%), Gaps = 8/991 (0%) Query: 6 IQRIVKVRRDYNTWVANETLEDYALRYTPRSFRRWSEFRLANTALGATSFLALEAISGAI 65 IQRIVK+RRDYN+WVA+ETLEDYALR+TP+SFR+WSEFR+ANTALGA SFLALEAI G + Sbjct: 6 IQRIVKIRRDYNSWVADETLEDYALRFTPKSFRKWSEFRIANTALGAVSFLALEAIGGTL 65 Query: 66 TLSYGFTNTFWAIACVVVLFFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTVTSLIYA 125 LSYGFTNT WAI V ++ FLTGLPISYYAARYGVDMDLLTRGAGFGYIGST+TSLIYA Sbjct: 66 ALSYGFTNTLWAILAVALVIFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYA 125 Query: 126 SFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSLIVIPMVAYGITLINRLQMWTQPLWI 185 SFTF+FFALEAAIMA A+E+YF +PL YV+CS+I++P+V YGITLINRLQ+WTQPLW+ Sbjct: 126 SFTFLFFALEAAIMALALELYFSIPLALAYVVCSVIIVPLVTYGITLINRLQLWTQPLWL 185 Query: 186 VLLTLPYICVLYKEPDALTNLITFSGRAEEGGSFNIYLFGAAATVAFSLIAQIGEQVDFL 245 LL LPY+ V+ K PDAL +L +F+GR GG+FN+ FGAA TVA +LI QIGEQVD+L Sbjct: 186 TLLLLPYVFVIAKNPDALADLTSFAGREGNGGAFNLLSFGAACTVALALITQIGEQVDYL 245 Query: 246 RFLPEKTQANRGRWWTALLLAGPGWILLGGAKMLGGALLAFLAVQHEVPMGKAVEPTQMY 305 RFLPEKT+ NR RWW A+L AGPGWI+ G KML GA LAFLA+QHE+P+ KA EPTQMY Sbjct: 246 RFLPEKTRQNRVRWWLAMLAAGPGWIIPGALKMLAGAFLAFLALQHEIPVDKAAEPTQMY 305 Query: 306 LIGYQYVFSNPALVLAAVALFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLV 365 L+ + YVF++P LAA+ LFV+VSQ+KINVTNAYAGSLAWSNFFAR+THSHPGRVVWLV Sbjct: 306 LVAFSYVFASPEWALAAMVLFVIVSQVKINVTNAYAGSLAWSNFFARVTHSHPGRVVWLV 365 Query: 366 FNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVSDLVINKPLKLSPAHIEFKRAHL 425 FNV IA++LMELGVF A+E VL LY+ VAI+WIGA+V+DLVINKPL LSP IEFKRAHL Sbjct: 366 FNVAIALMLMELGVFEAIEQVLGLYANVAIAWIGALVADLVINKPLGLSPRQIEFKRAHL 425 Query: 426 YDINPVGVGSMAIASILSAIAMSGVLGKLAAAMSPFIALGTAMLMAPLIAIATRSRYYIA 485 YDINPVGVGSM IAS+L+ +A SG+LG+LA A SP IALGTA+L APLIA T R+YIA Sbjct: 426 YDINPVGVGSMLIASLLAILAHSGLLGELAQAASPVIALGTALLCAPLIAWLTGGRFYIA 485 Query: 486 RKDTLPEHLHTGKNSDHQHAALECVICGNQFEMPDMAHCPAYQGAICSLCCSLDARCNDR 545 R+ PE L+ + + CV+C N FE PD A CPAY ICSLCCSLDARC D Sbjct: 486 RERQ-PELLYPYT----ERGKIACVLCSNAFEEPDTAFCPAYGAPICSLCCSLDARCGDL 540 Query: 546 CKTPAARLPNQVFSTLQALLPSRFTLKLNTRIGHYLIVFGLLSGGLAVVLWMLYFQQMAG 605 CK P RL Q + L+ P +L+TR+ HYL V GL+ G L++ LW++Y Q Sbjct: 541 CK-PHGRLSAQWDAFLRWAFPQVSIPRLHTRLAHYLGVLGLIIGLLSLALWLIYSQVSLS 599 Query: 606 ISGLTPSGPDSIQSIFIKLFCTLLVLIGVGSWWLILTNESRSVAHEESERQTNLLLQEIE 665 + +++ F+K F L + G+ +WW++LT ESR VA +ES+RQT+LL+QEIE Sbjct: 600 VVASPQETGETLYQAFLKAFLVLSLFAGILAWWVVLTRESRHVAQQESDRQTHLLMQEIE 659 Query: 666 AHKQTDAELQRAKEAAESANLAKSRFVTGMSHELRTPLNSILGYAQILHVDATIPPARKD 725 AH++TD +LQ+AKEA+E+AN AKSR+VTG+SHELRTPLNSILGYAQIL D + P KD Sbjct: 660 AHRKTDEQLQKAKEASEAANAAKSRYVTGLSHELRTPLNSILGYAQILLRDEAMAPRHKD 719 Query: 726 AIAVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALWEFLEQIAGMFAPQAEQKGLS 785 A+ I RSG HLLSLIDGLLD+AKIEAGK+ L E+A EFL+Q+ M APQAE+KGL Sbjct: 720 ALGTIHRSGAHLLSLIDGLLDVAKIEAGKLNLEQSEIAFPEFLQQLRQMIAPQAEEKGLR 779 Query: 786 FRFEKTGRIPHIVHADQKRLRQILINLLGNAVKFTDSGSVTVRVRYLREIAYFDIIDTGI 845 F FE GR+P +V D+KR+RQILINLLGNAV++TD+GS+T+R YLRE A F+I DTGI Sbjct: 780 FHFESQGRMPAVVRGDEKRVRQILINLLGNAVRYTDAGSITLRASYLRETATFEIADTGI 839 Query: 846 GIADDDLERIFLPFERSNAANLREDIGTGLGLAISSMLTHIMGGELAVKSKVGSGSSFHL 905 GI + +ER+F PFER N LR+D G GLGL I+ MLT +MGGEL+VKS+ G G+ F L Sbjct: 840 GIPAEQIERLFQPFERGNP--LRQDNGLGLGLTITRMLTALMGGELSVKSQEGQGTVFQL 897 Query: 906 KIYLPEVHVPRPRLKLEDQMSGYIGPSKRVLVVDDQASQRLLLKEMLLPLGFEVVEADGG 965 +++L EV VP+ + +E + GY GP +RVLVVDD R +L ML PLGFEV+ A G Sbjct: 898 RLFLSEVRVPQAVVHVEHDIVGYHGPRRRVLVVDDHIEHRKVLAGMLEPLGFEVLMASNG 957 Query: 966 IACLEELARGIPDLVLLDIAMPLMDGWSVAR 996 L + + PDL+L+D++MP +DGW AR Sbjct: 958 QEALSQASLHNPDLILMDLSMPQLDGWQTAR 988 >ref|YP_004355046.1| histidine kinase, Hybrid [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA70042.1| putative Histidine kinase, Hybrid [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1131 Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust. Identities = 617/993 (62%), Positives = 752/993 (75%), Gaps = 9/993 (0%) Query: 4 PAIQRIVKVRRDYNTWVANETLEDYALRYTPRSFRRWSEFRLANTALGATSFLALEAISG 63 P QRI K+RRDYN+WVA+ET+EDYALRYTP+SFR+WSE R+ANTALGA SFLALEAI G Sbjct: 4 PGTQRIAKIRRDYNSWVADETMEDYALRYTPKSFRKWSELRIANTALGAVSFLALEAIGG 63 Query: 64 AITLSYGFTNTFWAIACVVVLFFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTVTSLI 123 + LSYGFTNTFWAI V ++ FLTGLP+SYYAARYGVDMDLLTRGAGFGYIGST+TSLI Sbjct: 64 VLALSYGFTNTFWAILAVSLIIFLTGLPVSYYAARYGVDMDLLTRGAGFGYIGSTITSLI 123 Query: 124 YASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSLIVIPMVAYGITLINRLQMWTQPL 183 YASFTF+FFALEAAIMA A+E+YF +PL + YV+CS++VIP+VAYG+TLI+RLQ+WTQPL Sbjct: 124 YASFTFLFFALEAAIMALALELYFHIPLAFAYVICSVLVIPLVAYGVTLISRLQLWTQPL 183 Query: 184 WIVLLTLPYICVLYKEPDALTNLITFSGRAEEGGSFNIYLFGAAATVAFSLIAQIGEQVD 243 W+ LL LPY+ VL K P+A ++ +F GR GG FN+ F AA TVA SL+ QIGEQVD Sbjct: 184 WLALLVLPYLFVLLKNPEAFSDWTSFQGRDTGGGDFNLLAFCAACTVALSLVTQIGEQVD 243 Query: 244 FLRFLPEKTQANRGRWWTALLLAGPGWILLGGAKMLGGALLAFLAVQHEVPMGKAVEPTQ 303 +LRFLPEKT ANR RWW ALL AGPGWIL G KM GA LAFLA+QHE+P+ +A EPTQ Sbjct: 244 YLRFLPEKTAANRKRWWAALLCAGPGWILPGALKMFAGAFLAFLALQHEIPIERATEPTQ 303 Query: 304 MYLIGYQYVFSNPALVLAAVALFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVW 363 MYL+ + YVF++P LAA+ LFV VSQ+KIN+TNAYAGSLAWSNFFAR+THSHPGRVVW Sbjct: 304 MYLVAFGYVFASPEWALAAMVLFVFVSQMKINLTNAYAGSLAWSNFFARVTHSHPGRVVW 363 Query: 364 LVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVSDLVINKPLKLSPAHIEFKRA 423 LVFNV IA++LMELGVF+ ++ VL LY+ +AI+WIG+VV+DLVINKPL LSP HIEFKRA Sbjct: 364 LVFNVAIALMLMELGVFDVIDQVLGLYANIAIAWIGSVVADLVINKPLGLSPKHIEFKRA 423 Query: 424 HLYDINPVGVGSMAIASILSAIAMSGVLGKLAAAMSPFIALGTAMLMAPLIAIATRSRYY 483 HLYDINPVGVGSM IAS+LS +A G+ G LA A PF+ALGT+++M PL+A ATRSRYY Sbjct: 424 HLYDINPVGVGSMLIASLLSVLAHFGLFGALAQAAPPFVALGTSLVMTPLLAWATRSRYY 483 Query: 484 IARKDTLPEHLHTGKNSDHQHAALECVICGNQFEMPDMAHCPAYQGAICSLCCSLDARCN 543 IAR P L S + C +C N FE DMA CPAY ICSLCCSLDARC Sbjct: 484 IARTSD-PLLLQPVAPSTQ----ITCGLCSNPFETADMAFCPAYSTPICSLCCSLDARCG 538 Query: 544 DRCKTPAARLPNQVFSTLQALLPSRFTLKLNTRIGHYLIVFGLLSGGLAVVLWMLYFQQM 603 DRCK P RL Q + L LLP+ +L+TR+ HYL + L L+ L ++Y Q Sbjct: 539 DRCK-PHGRLSAQFEALLHWLLPNATVPRLHTRLVHYLGLLLALILMLSGALALIYGQAS 597 Query: 604 AGISGLTPSGPDSIQSIFIKLFCTLLVLIGVGSWWLILTNESRSVAHEESERQTNLLLQE 663 G+ +P ++ F K F TL VL + +WW++LT ESR VA EES+RQT LL+QE Sbjct: 598 QGLPH-SPQAQATLYQAFFKAFLTLSVLAAILAWWVVLTRESRHVAQEESDRQTQLLMQE 656 Query: 664 IEAHKQTDAELQRAKEAAESANLAKSRFVTGMSHELRTPLNSILGYAQILHVDATIPPAR 723 IEAH+ TD LQ AKEA+E+AN AKSR+VTG+SHELRTPLNSILG+ QIL DA +P Sbjct: 657 IEAHRLTDQALQDAKEASEAANAAKSRYVTGLSHELRTPLNSILGFTQILQRDAAMPEQH 716 Query: 724 KDAIAVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALWEFLEQIAGMFAPQAEQKG 783 +DA+A I RSG HLLSLIDGLLD+AKIEAGK+RL + E+ E + + MF PQA KG Sbjct: 717 QDALATILRSGSHLLSLIDGLLDVAKIEAGKLRLEATEIPFPELIHDLELMFTPQARDKG 776 Query: 784 LSFRFEKTGRIPHIVHADQKRLRQILINLLGNAVKFTDSGSVTVRVRYLREIAYFDIIDT 843 L FR E G++P +V D+KR+RQILINLLGNAV FTDSG V +RV Y+RE A FDIIDT Sbjct: 777 LRFRLELIGKMPAVVRGDEKRVRQILINLLGNAVNFTDSGEVCLRVSYMRETATFDIIDT 836 Query: 844 GIGIADDDLERIFLPFERSNAANLREDIGTGLGLAISSMLTHIMGGELAVKSKVGSGSSF 903 GIGI + +ERIF PFER + +R+D G GLGL I+ MLT +MGGEL VKS+ G+ F Sbjct: 837 GIGIDPEHIERIFQPFERGDL--MRQDKGVGLGLTITRMLTSLMGGELQVKSQQDKGTCF 894 Query: 904 HLKIYLPEVHVPRPRLKLEDQMSGYIGPSKRVLVVDDQASQRLLLKEMLLPLGFEVVEAD 963 ++++L +V VP+ + +E + GY GP + VLVVDD R +L ML PLGFEVV+A Sbjct: 895 QVRLFLSQVRVPQAVIHVEHDIIGYQGPRRLVLVVDDHVDHRKVLSGMLTPLGFEVVQAS 954 Query: 964 GGIACLEELARGIPDLVLLDIAMPLMDGWSVAR 996 G + ++A PDL+L+D++MP MDGW +R Sbjct: 955 NGQEAIRQVALLGPDLILMDLSMPTMDGWETSR 987 >ref|NP_793841.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato str. DC3000] gb|AAO57536.1| sensor histidine kinase/response regulator [Pseudomonas syringae pv. tomato str. DC3000] Length = 1161 Score = 1214 bits (3140), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/999 (58%), Positives = 750/999 (75%), Gaps = 8/999 (0%) Query: 7 QRIVKVRRDYNTWVANETLEDYALRYTPRSFRRWSEFRLANTALGATSFLALEAISGAIT 66 QRI+K+RRDYN VA+ET+EDYALR+TP+SFR+WSE+R++NTA+GA SFLALEAI GA+ Sbjct: 45 QRIIKIRRDYNRLVADETMEDYALRFTPKSFRKWSEWRISNTAVGAVSFLALEAIGGALV 104 Query: 67 LSYGFTNTFWAIACVVVLFFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTVTSLIYAS 126 +SYGFTNT WAI ++ FLTGLPISYYAARYGVDMDLLTRGAGFGYIGST+TSLIYAS Sbjct: 105 ISYGFTNTLWAILATALVIFLTGLPISYYAARYGVDMDLLTRGAGFGYIGSTITSLIYAS 164 Query: 127 FTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSLIVIPMVAYGITLINRLQMWTQPLWIV 186 FTF+FFALEAAIMA A+E+YF +P+ Y++CS+IVIP+ YG+TLI+RLQMW+QPLW+ Sbjct: 165 FTFLFFALEAAIMALALELYFHIPIALAYIICSIIVIPLAVYGVTLISRLQMWSQPLWLT 224 Query: 187 LLTLPYICVLYKEPDALTNLITFSGRAEEGGSFNIYLFGAAATVAFSLIAQIGEQVDFLR 246 LL +PY+ V++K PDAL + ++FSGR EGG+F++ FGAA +VA SL+ QIGEQVD+LR Sbjct: 225 LLLVPYVFVIWKNPDALGDWLSFSGREGEGGTFDLLFFGAAFSVALSLVTQIGEQVDYLR 284 Query: 247 FLPEKTQANRGRWWTALLLAGPGWILLGGAKMLGGALLAFLAVQHEVPMGKAVEPTQMYL 306 FLPEKT+ NR RWW ALL+AGPGWI+ G K++ GA LAFLA+QHEVP+ +A EPTQMYL Sbjct: 285 FLPEKTRHNRKRWWAALLMAGPGWIIPGALKIMAGAFLAFLALQHEVPVERAAEPTQMYL 344 Query: 307 IGYQYVFSNPALVLAAVALFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVF 366 + ++YVFS+P LAA+ LFV++SQIKIN+TNAYAGSLAWSNFF R+THSHPGRVVWLVF Sbjct: 345 VAFRYVFSSPEWALAAMTLFVIISQIKINMTNAYAGSLAWSNFFVRVTHSHPGRVVWLVF 404 Query: 367 NVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVSDLVINKPLKLSPAHIEFKRAHLY 426 NV IA++LMELGVF+A+E VL LY+ VAI+WIGA+V+DLVINKP+ SP HIEFKRAHLY Sbjct: 405 NVAIALVLMELGVFDAIEQVLGLYANVAIAWIGALVADLVINKPMGWSPKHIEFKRAHLY 464 Query: 427 DINPVGVGSMAIASILSAIAMSGVLGKLAAAMSPFIALGTAMLMAPLIAIATRSRYYIAR 486 DINPVGVG+M+IAS++S A G+ G +A A P I+L A++ APL+A T +YYIAR Sbjct: 465 DINPVGVGAMSIASLVSFCAHFGLFGAIAQAAPPLISLAIALVTAPLLAWLTDGKYYIAR 524 Query: 487 KDTLPEHLHTGKNSDHQHAALECVICGNQFEMPDMAHCPAYQGAICSLCCSLDARCNDRC 546 + G+ +L C +C N FE PDMA+CPAY+ ICSLCCSLDARC D+C Sbjct: 525 TSSDTLLYPQGRQE-----SLLCGLCNNAFETPDMAYCPAYRTPICSLCCSLDARCGDQC 579 Query: 547 KTPAARLPNQVFSTLQALLPSRFTLKLNTRIGHYLIVFGLLSGGLAVVLWMLYFQQMAGI 606 K P ARL Q + +LP L+TR+ YL + +L G + L ++Y Q G+ Sbjct: 580 K-PRARLSMQFEDLIGKVLPRFPRHYLHTRLAQYLGLLTILVAGSSGALALIYNQVAHGL 638 Query: 607 SGLTPSGPDSIQSIFIKLFCTLLVLIGVGSWWLILTNESRSVAHEESERQTNLLLQEIEA 666 +P + F+K F T+ V GV +WW++LT ESR VA EESERQT+LL+QEI+A Sbjct: 639 IDQSPEAHHLLMLAFLKAFLTVCVFAGVLAWWVVLTRESRRVAQEESERQTSLLIQEIDA 698 Query: 667 HKQTDAELQRAKEAAESANLAKSRFVTGMSHELRTPLNSILGYAQILHVDATIPPARKDA 726 H++TD LQ+AKEA+E+AN AKSR++TG+SHELRTPLNSILG+ QIL D T PP +D Sbjct: 699 HEKTDQALQKAKEASEAANAAKSRYITGLSHELRTPLNSILGFTQILQRDTTTPPHHQDP 758 Query: 727 IAVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALWEFLEQIAGMFAPQAEQKGLSF 786 +A I RS HLLSLI+GLLD+AKIEAGK++L E+ EFL + MFA A++K L F Sbjct: 759 LATIMRSSSHLLSLINGLLDVAKIEAGKLKLEPTEILFQEFLHDLEKMFAGTAQEKNLGF 818 Query: 787 RFEKTGRIPHIVHADQKRLRQILINLLGNAVKFTDSGSVTVRVRYLREIAYFDIIDTGIG 846 R E GR+P +V D+KR+RQILINLLGNAV FTDSG V +RV Y RE A FDI+D+GIG Sbjct: 819 RLELEGRMPMVVRGDEKRVRQILINLLGNAVNFTDSGEVVLRVSYRRETAIFDIVDSGIG 878 Query: 847 IADDDLERIFLPFERSNAANLREDIGTGLGLAISSMLTHIMGGELAVKSKVGSGSSFHLK 906 IA + +ERIF PFER R D G GLGL I+ MLT +MGG L+V S G G+ F ++ Sbjct: 879 IAPEQIERIFQPFER--GGQTRHDNGVGLGLTITRMLTALMGGALSVSSTPGEGTHFKVR 936 Query: 907 IYLPEVHVPRPRLKLEDQMSGYIGPSKRVLVVDDQASQRLLLKEMLLPLGFEVVEADGGI 966 ++L EV VP+ + + + GY G + VLVVDD R ++ ML PLGF V +A+ G+ Sbjct: 937 LFLSEVRVPKAVIDVNHDVVGYDGERRLVLVVDDHIEHRKVISGMLEPLGFTVAQAENGM 996 Query: 967 ACLEELARGIPDLVLLDIAMPLMDGWSVARAXPGRARPD 1005 + +++ PDL+L+D++MP MDGW+ R AR + Sbjct: 997 EAVRQVSLLHPDLILMDLSMPDMDGWATLRMIRRNARSN 1035