BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0196.p (250 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03827546.1| binding-protein-dependent transport system in... 298 6e-79 gb|EGY28231.1| amine acid ABC transporter, permease protein, 3-T... 297 9e-79 ref|YP_003261887.1| polar amino acid ABC transporter inner membr... 296 1e-78 ref|ZP_03833680.1| binding-protein-dependent transport system in... 296 2e-78 ref|ZP_07395706.1| putative polar amino acid ABC transporter per... 296 3e-78 >ref|ZP_03827546.1| binding-protein-dependent transport system inner membrane component [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 247 Score = 298 bits (763), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 152/237 (64%), Positives = 183/237 (77%), Gaps = 1/237 (0%) Query: 8 SQLLAPKYLLWMWHGFQTTLLLSAATVVLATLLGFFLAAARSSAHPGLRVPAAAYTSLFR 67 S LLAP+YLLW+WHGF TL +S +T+VL+T+LGF LAAAR S LR AY+SLFR Sbjct: 10 SWLLAPQYLLWLWHGFLITLGISLSTIVLSTVLGFLLAAARDSQIRVLRGVVVAYSSLFR 69 Query: 68 NTPLLVQLLFWYFGVPGLFPEGAMEWLNAAHSIRFLGVLTLSWPSFEFLAAMIGVVLYST 127 NTPLLVQL FWYFG LFP M+WLN H++ LG TL+WPSFEFLA + G+ LYS+ Sbjct: 70 NTPLLVQLFFWYFGAGQLFPSAMMQWLNTPHALSLLGT-TLAWPSFEFLAGLAGLTLYSS 128 Query: 128 AYVSEEIRAGMRGVPATQSLAGAAIGLTRLQVVRYIVLPQAVRIALPPLLGQYMNILKNT 187 A+++EEIR+G+RGV Q A A+GLT Q +RY+VLPQA++IALPPLLGQYMNI+KN+ Sbjct: 129 AFIAEEIRSGVRGVARGQKYAAHALGLTGWQSMRYVVLPQALKIALPPLLGQYMNIVKNS 188 Query: 188 SLTMAIGLAELSYTSRQVEAETFRTFQAFGFATLLYIVAIALIESVGHWHLQARLAH 244 SLTMAIG+AELSY SRQVE ET RTFQAFG AT+LYIV IA++E G W Q LA Sbjct: 189 SLTMAIGVAELSYASRQVETETLRTFQAFGVATVLYIVIIAVMEGWGMWRQQRSLAE 245 >gb|EGY28231.1| amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [Candidatus Regiella insecticola R5.15] Length = 245 Score = 297 bits (761), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 148/243 (60%), Positives = 184/243 (75%), Gaps = 2/243 (0%) Query: 4 HFDTSQLLAPKYLLWMWHGFQTTLLLSAATVVLATLLGFFLAAARSSAHPGLRVPAAAYT 63 H T LLAP+YLLW+W GF TL LS+ T+V+ATLLGF LA AR S L+ P Y+ Sbjct: 4 HHLTDWLLAPQYLLWLWDGFLLTLWLSSCTLVIATLLGFLLATARDSHLRALQWPVMIYS 63 Query: 64 SLFRNTPLLVQLLFWYFGVPGLFPEGAMEWLNAAHSIRFLGVLTLSWPSFEFLAAMIGVV 123 +LFRNTPLL+QL FWYF V + P M+WLN +H FLG+ TLSWPSFEFL+ + G++ Sbjct: 64 ALFRNTPLLIQLFFWYFAVSKILPVSWMQWLNISHQAAFLGI-TLSWPSFEFLSGLTGLI 122 Query: 124 LYSTAYVSEEIRAGMRGVPATQSLAGAAIGLTRLQVVRYIVLPQAVRIALPPLLGQYMNI 183 LYS A+++E++RAG+ GV + Q A A+GLT Q +RY++LPQA++IA+PPLLGQYMNI Sbjct: 123 LYSAAFIAEDLRAGINGVASGQKYAAHALGLTNWQSMRYVILPQALKIAMPPLLGQYMNI 182 Query: 184 LKNTSLTMAIGLAELSYTSRQVEAETFRTFQAFGFATLLYIVAIALIESVGHWHLQARLA 243 +KN+SLTMAIG+AELSY SRQVE ET RTFQAFG ATLLYI+ IALIE+ G W Q RL Sbjct: 183 IKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVATLLYIITIALIEAWGMWR-QQRLR 241 Query: 244 HDG 246 G Sbjct: 242 ARG 244 >ref|YP_003261887.1| polar amino acid ABC transporter inner membrane protein [Pectobacterium wasabiae WPP163] gb|ACX90280.1| polar amino acid ABC transporter, inner membrane subunit [Pectobacterium wasabiae WPP163] Length = 247 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 154/237 (64%), Positives = 182/237 (76%), Gaps = 1/237 (0%) Query: 8 SQLLAPKYLLWMWHGFQTTLLLSAATVVLATLLGFFLAAARSSAHPGLRVPAAAYTSLFR 67 S LLAP+YL W+WHGF TL LS TVVL+T+ GF LAAAR S LR AY+SLFR Sbjct: 10 SWLLAPQYLTWLWHGFLITLGLSLGTVVLSTVSGFLLAAARDSQIHVLRGVVVAYSSLFR 69 Query: 68 NTPLLVQLLFWYFGVPGLFPEGAMEWLNAAHSIRFLGVLTLSWPSFEFLAAMIGVVLYST 127 NTPLLVQL FWYFG LFP M+WLNA H+I LG +TL+WPSFEFLA + G+ LYS+ Sbjct: 70 NTPLLVQLFFWYFGAGQLFPSEMMQWLNAPHAISLLG-MTLAWPSFEFLAGLAGLTLYSS 128 Query: 128 AYVSEEIRAGMRGVPATQSLAGAAIGLTRLQVVRYIVLPQAVRIALPPLLGQYMNILKNT 187 A+++EEIR+G+RGV Q A A+GLT Q +RY+VLPQA++IALPPLLGQYMNI+KN+ Sbjct: 129 AFIAEEIRSGIRGVAHGQKYAAQALGLTGWQSMRYVVLPQALKIALPPLLGQYMNIVKNS 188 Query: 188 SLTMAIGLAELSYTSRQVEAETFRTFQAFGFATLLYIVAIALIESVGHWHLQARLAH 244 SLTMAIG+AELSY SRQVE ET RTFQAFG AT+LYIV IA++E G W Q LA Sbjct: 189 SLTMAIGVAELSYASRQVETETLRTFQAFGVATVLYIVIIAVMEGWGMWRQQRGLAE 245 >ref|ZP_03833680.1| binding-protein-dependent transport system inner membrane component [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 247 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 151/237 (63%), Positives = 182/237 (76%), Gaps = 1/237 (0%) Query: 8 SQLLAPKYLLWMWHGFQTTLLLSAATVVLATLLGFFLAAARSSAHPGLRVPAAAYTSLFR 67 S LLAP+YL+W+WHGF TL LS +T+VL+T+LGF LAAAR LR AY+SLFR Sbjct: 10 SWLLAPQYLIWLWHGFLITLGLSLSTIVLSTVLGFLLAAARDGQIHVLRGVVVAYSSLFR 69 Query: 68 NTPLLVQLLFWYFGVPGLFPEGAMEWLNAAHSIRFLGVLTLSWPSFEFLAAMIGVVLYST 127 NTPLLVQL FWYFG LFP M+WLN H++ G +TL+WPSFEFLA + G+ LYS+ Sbjct: 70 NTPLLVQLFFWYFGAGQLFPSEMMQWLNTPHTLSLFG-MTLAWPSFEFLAGLAGLTLYSS 128 Query: 128 AYVSEEIRAGMRGVPATQSLAGAAIGLTRLQVVRYIVLPQAVRIALPPLLGQYMNILKNT 187 A+++EEIRAG+RGV Q A A+GLT Q +RY+VLPQA++IALPPLLGQYMNI+KN+ Sbjct: 129 AFIAEEIRAGIRGVARGQKYAAHALGLTGFQSMRYVVLPQALKIALPPLLGQYMNIVKNS 188 Query: 188 SLTMAIGLAELSYTSRQVEAETFRTFQAFGFATLLYIVAIALIESVGHWHLQARLAH 244 SLTMAIG+AELSY SRQVE ET RTFQAFG AT+LYIV IA++E G W Q LA Sbjct: 189 SLTMAIGVAELSYASRQVETETLRTFQAFGVATVLYIVIIAVMEGWGMWRQQRSLAE 245 >ref|ZP_07395706.1| putative polar amino acid ABC transporter permease [Candidatus Regiella insecticola LSR1] gb|EFL91606.1| putative polar amino acid ABC transporter permease [Candidatus Regiella insecticola LSR1] Length = 245 Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 148/243 (60%), Positives = 183/243 (75%), Gaps = 2/243 (0%) Query: 4 HFDTSQLLAPKYLLWMWHGFQTTLLLSAATVVLATLLGFFLAAARSSAHPGLRVPAAAYT 63 H T LLAP+YLLW+W GF TL LS+ T V+ATLLGF LA AR S L+ P Y+ Sbjct: 4 HHLTDWLLAPQYLLWLWDGFLLTLWLSSCTSVIATLLGFLLATARDSHLRALQWPVMLYS 63 Query: 64 SLFRNTPLLVQLLFWYFGVPGLFPEGAMEWLNAAHSIRFLGVLTLSWPSFEFLAAMIGVV 123 +LFRNTPLL+QL FWYF V + P M+WLN +H FLG+ TLSWPSFEFL+ + G++ Sbjct: 64 ALFRNTPLLIQLFFWYFAVSKILPVSWMQWLNISHQAVFLGI-TLSWPSFEFLSGLTGLI 122 Query: 124 LYSTAYVSEEIRAGMRGVPATQSLAGAAIGLTRLQVVRYIVLPQAVRIALPPLLGQYMNI 183 LYS A+++EE+RAG+ GV + Q A A+GLT Q +RY++LPQA++I++PPLLGQYMNI Sbjct: 123 LYSAAFIAEELRAGINGVASGQKYAAHALGLTNWQSMRYVILPQALKISMPPLLGQYMNI 182 Query: 184 LKNTSLTMAIGLAELSYTSRQVEAETFRTFQAFGFATLLYIVAIALIESVGHWHLQARLA 243 +KN+SLTMAIG+AELSY SRQVE ET RTFQAFG ATLLYI+ IALIE+ G W Q RL Sbjct: 183 IKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVATLLYIMTIALIEAWGMWR-QQRLK 241 Query: 244 HDG 246 G Sbjct: 242 ARG 244