BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0184.p (257 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06842646.1| short-chain dehydrogenase/reductase SDR [Burk... 451 e-125 ref|YP_552655.1| putative short-chain dehydrogenase/reductase [B... 449 e-124 ref|YP_555290.1| putative short-chain dehydrogenase [Burkholderi... 445 e-123 ref|YP_001862001.1| short-chain dehydrogenase/reductase SDR [Bur... 441 e-122 ref|ZP_07026653.1| short-chain dehydrogenase/reductase SDR [Afip... 438 e-121 >ref|ZP_06842646.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. Ch1-1] gb|EFG69834.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. Ch1-1] Length = 253 Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust. Identities = 229/248 (92%), Positives = 238/248 (95%) Query: 10 QAPLILITGGSRGVGAATARLAAVQGYDVAISFVSNESAALAVAADVEALGRRALAVRAD 69 Q PLILITGG RGVGAATARLAA GYDVAISFVS+ESAALAVAADVEA+GRRALAVRAD Sbjct: 6 QVPLILITGGGRGVGAATARLAAAHGYDVAISFVSDESAALAVAADVEAVGRRALAVRAD 65 Query: 70 SADPEQVAQLFTAIDRSFGRIDVLVNNAAMLSPQSRLEDLGFARMQRIFAVNAIGPILCA 129 SADPEQVAQLF AIDR FGRIDVLVNNAA+++ QSRLEDL F RMQRIFAVN+IGPILCA Sbjct: 66 SADPEQVAQLFAAIDRKFGRIDVLVNNAAIIAQQSRLEDLEFERMQRIFAVNSIGPILCA 125 Query: 130 QQAVKRMSTRHNGRGGVVVNISSASARLGSPNEYVDYAASKGALETFTTGFAKEVAREGI 189 QQAVKRMS RHNGRGGVV+N+SSASARLGSPNEYVDYAASKGALETFTTGFAKEVAREGI Sbjct: 126 QQAVKRMSHRHNGRGGVVINVSSASARLGSPNEYVDYAASKGALETFTTGFAKEVAREGI 185 Query: 190 RVNCIRPGHIYTEMHASGGEPGRVDRVKDSIPMGRGGQPEEVARAILWLASAEASFITGT 249 RVNCIRPGHIYT+MHASGGEPGRVDRVKDSIPMGRGGQPEEVARAILWLASAEASFITGT Sbjct: 186 RVNCIRPGHIYTDMHASGGEPGRVDRVKDSIPMGRGGQPEEVARAILWLASAEASFITGT 245 Query: 250 FLDVTGGK 257 FLDVTGGK Sbjct: 246 FLDVTGGK 253 >ref|YP_552655.1| putative short-chain dehydrogenase/reductase [Burkholderia xenovorans LB400] gb|ABE33305.1| Putative short-chain dehydrogenase/reductase [Burkholderia xenovorans LB400] Length = 253 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 229/248 (92%), Positives = 241/248 (97%) Query: 10 QAPLILITGGSRGVGAATARLAAVQGYDVAISFVSNESAALAVAADVEALGRRALAVRAD 69 QAPLILITGG RGVGAATARLAA QGYDVAISFVS+ESAALAVAADVEA GRRALAVRAD Sbjct: 6 QAPLILITGGGRGVGAATARLAAAQGYDVAISFVSDESAALAVAADVEAAGRRALAVRAD 65 Query: 70 SADPEQVAQLFTAIDRSFGRIDVLVNNAAMLSPQSRLEDLGFARMQRIFAVNAIGPILCA 129 SADPEQVA+LF AIDR+FGRIDVLVNNAA+++ QSRLEDL FARMQRIFAVN+IGPILCA Sbjct: 66 SADPEQVARLFAAIDRTFGRIDVLVNNAAIIAKQSRLEDLEFARMQRIFAVNSIGPILCA 125 Query: 130 QQAVKRMSTRHNGRGGVVVNISSASARLGSPNEYVDYAASKGALETFTTGFAKEVAREGI 189 QQAVKRMS R+NGRGGVV+NISSASARLGSPNEYVDYAASKGALETFTTGFAKEVAR+GI Sbjct: 126 QQAVKRMSHRYNGRGGVVINISSASARLGSPNEYVDYAASKGALETFTTGFAKEVARDGI 185 Query: 190 RVNCIRPGHIYTEMHASGGEPGRVDRVKDSIPMGRGGQPEEVARAILWLASAEASFITGT 249 RVNCIRPGHIYT+MHASGGEPGRVDRV+DSIPMGRGGQPEEVARAILWLASAEASFITGT Sbjct: 186 RVNCIRPGHIYTDMHASGGEPGRVDRVRDSIPMGRGGQPEEVARAILWLASAEASFITGT 245 Query: 250 FLDVTGGK 257 FLDVTGGK Sbjct: 246 FLDVTGGK 253 >ref|YP_555290.1| putative short-chain dehydrogenase [Burkholderia xenovorans LB400] gb|ABE35940.1| Putative short-chain dehydrogenase [Burkholderia xenovorans LB400] Length = 253 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 227/257 (88%), Positives = 242/257 (94%), Gaps = 4/257 (1%) Query: 1 MDTLSRSQSQAPLILITGGSRGVGAATARLAAVQGYDVAISFVSNESAALAVAADVEALG 60 MDT+S QAPLILITGG RG+GAATARLAA QGYDVAISFVSNESAALAVAADVEA+G Sbjct: 1 MDTVS----QAPLILITGGGRGIGAATARLAAAQGYDVAISFVSNESAALAVAADVEAVG 56 Query: 61 RRALAVRADSADPEQVAQLFTAIDRSFGRIDVLVNNAAMLSPQSRLEDLGFARMQRIFAV 120 RRAL +RADSADPEQVAQLF A+DR FGR+DVLVNNAA+++ QSRLEDLGF R+QRIFAV Sbjct: 57 RRALPMRADSADPEQVAQLFAALDRQFGRLDVLVNNAAIIAQQSRLEDLGFERLQRIFAV 116 Query: 121 NAIGPILCAQQAVKRMSTRHNGRGGVVVNISSASARLGSPNEYVDYAASKGALETFTTGF 180 N+IGPILCAQQAVKRMS RHNGRGG V+NISSASA+LGSPNEYVDYAASKGALETFTTGF Sbjct: 117 NSIGPILCAQQAVKRMSRRHNGRGGAVINISSASAQLGSPNEYVDYAASKGALETFTTGF 176 Query: 181 AKEVAREGIRVNCIRPGHIYTEMHASGGEPGRVDRVKDSIPMGRGGQPEEVARAILWLAS 240 AKEVAR+GIRVNCIR GHIYT+MHASGGEPGRVDRVKDSIPMGRGGQPEEVARAILWLA Sbjct: 177 AKEVARDGIRVNCIRAGHIYTDMHASGGEPGRVDRVKDSIPMGRGGQPEEVARAILWLAG 236 Query: 241 AEASFITGTFLDVTGGK 257 AEASFITGTFLDVTGGK Sbjct: 237 AEASFITGTFLDVTGGK 253 >ref|YP_001862001.1| short-chain dehydrogenase/reductase SDR [Burkholderia phymatum STM815] gb|ACC74955.1| short-chain dehydrogenase/reductase SDR [Burkholderia phymatum STM815] Length = 253 Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust. Identities = 225/249 (90%), Positives = 237/249 (95%) Query: 9 SQAPLILITGGSRGVGAATARLAAVQGYDVAISFVSNESAALAVAADVEALGRRALAVRA 68 SQAPLILITGG RGVGAATARLAA QGYDVAISF+SNESAALAVAADV+A GRRALAVRA Sbjct: 5 SQAPLILITGGGRGVGAATARLAAAQGYDVAISFLSNESAALAVAADVKAHGRRALAVRA 64 Query: 69 DSADPEQVAQLFTAIDRSFGRIDVLVNNAAMLSPQSRLEDLGFARMQRIFAVNAIGPILC 128 DSADP QVA+LF AIDR FGRIDVLVNNAA+++ QSRLEDL F RMQRIFAVNAIGPILC Sbjct: 65 DSADPAQVARLFAAIDREFGRIDVLVNNAAIIAQQSRLEDLEFERMQRIFAVNAIGPILC 124 Query: 129 AQQAVKRMSTRHNGRGGVVVNISSASARLGSPNEYVDYAASKGALETFTTGFAKEVAREG 188 AQQA KRMS RHNGRGG V+NISSASARLGSPNEYVDYAASKGA+ETFTTGFAKEVAR+G Sbjct: 125 AQQAAKRMSRRHNGRGGSVINISSASARLGSPNEYVDYAASKGAVETFTTGFAKEVARDG 184 Query: 189 IRVNCIRPGHIYTEMHASGGEPGRVDRVKDSIPMGRGGQPEEVARAILWLASAEASFITG 248 IRVNCIRPGHIYTEMHASGGEPGRVDRVK+SIPMGRGGQP+EVARAILWLASAEASF+TG Sbjct: 185 IRVNCIRPGHIYTEMHASGGEPGRVDRVKESIPMGRGGQPDEVARAILWLASAEASFVTG 244 Query: 249 TFLDVTGGK 257 TFLDVTGGK Sbjct: 245 TFLDVTGGK 253 >ref|ZP_07026653.1| short-chain dehydrogenase/reductase SDR [Afipia sp. 1NLS2] gb|EFI51496.1| short-chain dehydrogenase/reductase SDR [Afipia sp. 1NLS2] Length = 250 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 219/248 (88%), Positives = 235/248 (94%) Query: 10 QAPLILITGGSRGVGAATARLAAVQGYDVAISFVSNESAALAVAADVEALGRRALAVRAD 69 QA LILITGG RGVGAATARLAA QGYDVAISF+SNESAALAV DVEA+GRRALAVRAD Sbjct: 3 QAQLILITGGGRGVGAATARLAAAQGYDVAISFISNESAALAVVHDVEAVGRRALAVRAD 62 Query: 70 SADPEQVAQLFTAIDRSFGRIDVLVNNAAMLSPQSRLEDLGFARMQRIFAVNAIGPILCA 129 SADP+Q+AQLF AID+ FGR+DVLVNNAA+++ QSRLEDL F RMQRIFAVNAIGPILCA Sbjct: 63 SADPKQIAQLFAAIDQKFGRLDVLVNNAAIIAKQSRLEDLEFERMQRIFAVNAIGPILCA 122 Query: 130 QQAVKRMSTRHNGRGGVVVNISSASARLGSPNEYVDYAASKGALETFTTGFAKEVAREGI 189 QQA KRMS RHNGRGGV+VNISSA+ARLGSPNEY+DYAASKGALETFTTGFAKEVAREGI Sbjct: 123 QQAAKRMSHRHNGRGGVIVNISSAAARLGSPNEYIDYAASKGALETFTTGFAKEVAREGI 182 Query: 190 RVNCIRPGHIYTEMHASGGEPGRVDRVKDSIPMGRGGQPEEVARAILWLASAEASFITGT 249 RVNCIRPGHIYTEMHASGGEP RVDRVKD+IP+GRGGQPEEVA+AILWLAS+EASFITGT Sbjct: 183 RVNCIRPGHIYTEMHASGGEPNRVDRVKDTIPLGRGGQPEEVAKAILWLASSEASFITGT 242 Query: 250 FLDVTGGK 257 FLDVTGGK Sbjct: 243 FLDVTGGK 250