BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0180.p (205 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001115848.1| LysR family transcriptional regulator [Burkh... 270 8e-71 ref|YP_002233141.1| LysR family regulatory protein [Burkholderia... 269 2e-70 ref|ZP_02904687.1| transcriptional regulator, LysR family [Burkh... 269 2e-70 ref|YP_002909059.1| LysR family transcriptional regulator [Burkh... 268 3e-70 ref|ZP_02888236.1| transcriptional regulator, LysR family [Burkh... 268 5e-70 >ref|YP_001115848.1| LysR family transcriptional regulator [Burkholderia vietnamiensis G4] gb|ABO56383.1| transcriptional regulator, LysR family [Burkholderia vietnamiensis G4] Length = 323 Score = 270 bits (691), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 130/192 (67%), Positives = 162/192 (84%) Query: 4 FDANALLRRLSTRLKMRHLLLLLQIRQYKSLTRVAEHMASTQPAITNALSELEGMFGGAL 63 FDAN ++RRL RLKMRHL+LLLQI+Q+ SLTRVAEHMAS+QPA+TNALSELE MFG L Sbjct: 3 FDANDVVRRLGARLKMRHLMLLLQIQQHGSLTRVAEHMASSQPAVTNALSELESMFGTPL 62 Query: 64 FDRSARGMAPTELGKVVLERAGAMVHDLRHLVRDIETLTSGHAGHLHIGITPFISGQLLT 123 F+RS+RGM PT LG VVLERA AM+ DL HL R++E + +GHA HLHIG+ PFISGQ+L+ Sbjct: 63 FERSSRGMRPTALGAVVLERAKAMLKDLEHLAREMEAVAAGHAAHLHIGVIPFISGQMLS 122 Query: 124 SAIQRTRPDGDQRLTVTIHEGTSDQLLAQLSDHALDLVIGRASSGVNLENIRFEVLYRQQ 183 +A++R + ++RLTVTIHEGTSDQLL QL DH++DLVIGRASS ++L + FEVLY+QQ Sbjct: 123 AALKRLQAGMERRLTVTIHEGTSDQLLLQLKDHSVDLVIGRASSAIDLGQVSFEVLYQQQ 182 Query: 184 PRLIASRAGSAR 195 PR+IASR +A+ Sbjct: 183 PRMIASRRLAAK 194 >ref|YP_002233141.1| LysR family regulatory protein [Burkholderia cenocepacia J2315] emb|CAR54375.1| LysR family regulatory protein [Burkholderia cenocepacia J2315] Length = 323 Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 129/192 (67%), Positives = 163/192 (84%) Query: 4 FDANALLRRLSTRLKMRHLLLLLQIRQYKSLTRVAEHMASTQPAITNALSELEGMFGGAL 63 FDAN ++RRL RLK+RHL+LLLQI+Q+ SLTRVAEHMAS+QPA+TNALSELE MFG AL Sbjct: 3 FDANDVVRRLGARLKIRHLVLLLQIQQHGSLTRVAEHMASSQPAVTNALSELESMFGTAL 62 Query: 64 FDRSARGMAPTELGKVVLERAGAMVHDLRHLVRDIETLTSGHAGHLHIGITPFISGQLLT 123 F+RS+RGM PT LG VVLERA AM+ DL HL R++E + +GHA HLHIG+ PFISGQ+L+ Sbjct: 63 FERSSRGMRPTALGAVVLERAKAMIKDLDHLAREMEAVAAGHAAHLHIGVIPFISGQMLS 122 Query: 124 SAIQRTRPDGDQRLTVTIHEGTSDQLLAQLSDHALDLVIGRASSGVNLENIRFEVLYRQQ 183 +A++R + ++RLTVTIHEGTSDQLL QL DH++D+VIGRASS ++L + FEVLY+QQ Sbjct: 123 AALKRLQARMERRLTVTIHEGTSDQLLLQLKDHSVDIVIGRASSAIDLGQVSFEVLYQQQ 182 Query: 184 PRLIASRAGSAR 195 PR+IASR +A+ Sbjct: 183 PRMIASRRLAAK 194 >ref|ZP_02904687.1| transcriptional regulator, LysR family [Burkholderia ambifaria MEX-5] gb|EDT44185.1| transcriptional regulator, LysR family [Burkholderia ambifaria MEX-5] Length = 330 Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 129/193 (66%), Positives = 163/193 (84%) Query: 3 VFDANALLRRLSTRLKMRHLLLLLQIRQYKSLTRVAEHMASTQPAITNALSELEGMFGGA 62 +FDAN ++RRL RLKMRHL+LLLQI+Q+ SLTRVAEHMAS+QPA+TNALSELE MFG Sbjct: 9 IFDANDVVRRLGARLKMRHLMLLLQIQQHGSLTRVAEHMASSQPAVTNALSELESMFGTP 68 Query: 63 LFDRSARGMAPTELGKVVLERAGAMVHDLRHLVRDIETLTSGHAGHLHIGITPFISGQLL 122 LF+R++RGM PT LG VVLERA AM+ DL HL R++E + +GHA HLHIG+ PFISGQ+L Sbjct: 69 LFERTSRGMRPTALGSVVLERARAMLKDLDHLAREMEAVAAGHAAHLHIGVIPFISGQML 128 Query: 123 TSAIQRTRPDGDQRLTVTIHEGTSDQLLAQLSDHALDLVIGRASSGVNLENIRFEVLYRQ 182 ++A++R + ++RLTVTIHEGTSDQLL QL DH++DLVIGRASS ++L + FEVLY+Q Sbjct: 129 SAALKRLQSRMERRLTVTIHEGTSDQLLLQLKDHSVDLVIGRASSAIDLGQVSFEVLYQQ 188 Query: 183 QPRLIASRAGSAR 195 QPR+IASR +A+ Sbjct: 189 QPRMIASRRLAAK 201 >ref|YP_002909059.1| LysR family transcriptional regulator [Burkholderia glumae BGR1] gb|ACR31824.1| Transcriptional regulator, LysR family [Burkholderia glumae BGR1] Length = 322 Score = 268 bits (685), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 129/192 (67%), Positives = 161/192 (83%) Query: 4 FDANALLRRLSTRLKMRHLLLLLQIRQYKSLTRVAEHMASTQPAITNALSELEGMFGGAL 63 FD + ++RRLSTRLK+RHL+LLLQIRQ+ SLTRVAE MAS+QPA+TNAL+ELE MFGG L Sbjct: 3 FDTDEVIRRLSTRLKIRHLILLLQIRQFGSLTRVAEQMASSQPAVTNALAELEAMFGGPL 62 Query: 64 FDRSARGMAPTELGKVVLERAGAMVHDLRHLVRDIETLTSGHAGHLHIGITPFISGQLLT 123 FDR+ RGM PT LGKVVL RA AM+HDL HL RDIE + +GHA +HIG+ PFISG+ L Sbjct: 63 FDRTPRGMTPTALGKVVLARAQAMLHDLEHLTRDIEAVVAGHATRIHIGVIPFISGKTLA 122 Query: 124 SAIQRTRPDGDQRLTVTIHEGTSDQLLAQLSDHALDLVIGRASSGVNLENIRFEVLYRQQ 183 +AI+RT+ D QRLT+TIHEGTS+ L+AQL +H LD+VI RA+S V+L ++RFEV+Y+Q+ Sbjct: 123 AAIRRTQADVPQRLTMTIHEGTSETLIAQLREHQLDVVIARATSTVDLADLRFEVVYQQR 182 Query: 184 PRLIASRAGSAR 195 PRLIASR +AR Sbjct: 183 PRLIASRRLAAR 194 >ref|ZP_02888236.1| transcriptional regulator, LysR family [Burkholderia ambifaria IOP40-10] gb|EDT06210.1| transcriptional regulator, LysR family [Burkholderia ambifaria IOP40-10] Length = 323 Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 129/192 (67%), Positives = 162/192 (84%) Query: 4 FDANALLRRLSTRLKMRHLLLLLQIRQYKSLTRVAEHMASTQPAITNALSELEGMFGGAL 63 FDAN ++RRL RLKMRHL+LLLQI+Q+ SLTRVAEHMAS+QPA+TNALSELE MFG L Sbjct: 3 FDANDVVRRLGARLKMRHLMLLLQIQQHGSLTRVAEHMASSQPAVTNALSELESMFGTPL 62 Query: 64 FDRSARGMAPTELGKVVLERAGAMVHDLRHLVRDIETLTSGHAGHLHIGITPFISGQLLT 123 F+R++RGM PT LG VVLERA AM+ DL HL R++E + +GHA HLHIG+ PFISGQ+L+ Sbjct: 63 FERTSRGMRPTALGSVVLERARAMLKDLDHLAREMEAVAAGHAAHLHIGVIPFISGQMLS 122 Query: 124 SAIQRTRPDGDQRLTVTIHEGTSDQLLAQLSDHALDLVIGRASSGVNLENIRFEVLYRQQ 183 +A++R + ++RLTVTIHEGTSDQLL QL DH++DLVIGRASS ++L + FEVLY+QQ Sbjct: 123 AALKRLQSRMERRLTVTIHEGTSDQLLLQLKDHSVDLVIGRASSAIDLGQVSFEVLYQQQ 182 Query: 184 PRLIASRAGSAR 195 PR+IASR +A+ Sbjct: 183 PRMIASRRLAAK 194