BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0164.p (334 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774530.1| transketolase, C-terminal subunit [Herbaspir... 653 0.0 ref|YP_001793291.1| transketolase central region [Leptothrix cho... 597 e-169 ref|YP_004126990.1| transketolase central region protein [Alicyc... 561 e-158 ref|YP_002945196.1| transketolase [Variovorax paradoxus S110] >g... 553 e-155 ref|YP_004418437.1| transketolase central region [Pusillimonas s... 550 e-154 >ref|YP_003774530.1| transketolase, C-terminal subunit [Herbaspirillum seropedicae SmR1] gb|ADJ62622.1| transketolase, C-terminal subunit, protein [Herbaspirillum seropedicae SmR1] Length = 334 Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/334 (93%), Positives = 327/334 (97%) Query: 1 MNTVAEKKPRLTTSAMIASIAAEGQRVQAAPFGKALVEYAADRPEIVGMTADLAKYTDLQ 60 MNTVA+KKPRLTTSAMIASIAAEGQRVQAAPFGKALV+YAADRPEIVG+TADLAKYTDL Sbjct: 1 MNTVADKKPRLTTSAMIASIAAEGQRVQAAPFGKALVDYAADRPEIVGLTADLAKYTDLH 60 Query: 61 LFQKAYPERFFQMGMAEQLLMAAAGGMAKEGLVPFATTYAVFATRRAYDFIHQVIAEENL 120 LFQKAYPERFFQMGMAEQLLMAAAGGMAKEGLVPFATTYAVFATRRAYDFIHQVIAEENL Sbjct: 61 LFQKAYPERFFQMGMAEQLLMAAAGGMAKEGLVPFATTYAVFATRRAYDFIHQVIAEENL 120 Query: 121 NVKICCALPGLTTGYGPSHQATEDLAMMRAIPGLTIVDPCDALDLEQAVPQIAEHKGPVY 180 NVKICCALPGLTTGYGPSHQATEDLAMMRAIPG+TIVDPCDALDLEQAVPQIA H+GPVY Sbjct: 121 NVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIAAHQGPVY 180 Query: 181 MRLARGNVPLVLDEYDYKFELGKAKELRDGNDVLIISSGFMTMRALEVAKALEADNVSVG 240 MRLARGNVPLVLDEYDY+FELG+AKE+RDGNDVLIISSGFMTMRALEVAKALEAD VSV Sbjct: 181 MRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALEADKVSVA 240 Query: 241 VLHCPTIKPFDEATVLEQVKKKTRLVVVAENHSVIGGLGEIVASTLMRNRVQPAGFQMAG 300 VLHCPTIKPFDEATV+ QVKKK RLVVVAENHSV+GGLGEIVA+TLMR+RVQPAGFQ+AG Sbjct: 241 VLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQPAGFQLAG 300 Query: 301 LPDAFLDAGALPTLHDRYGISCEVLSRRIRDWLK 334 LPDAFLDAGALPTLHDRYGISCEVL RRI++WLK Sbjct: 301 LPDAFLDAGALPTLHDRYGISCEVLGRRIKEWLK 334 >ref|YP_001793291.1| transketolase central region [Leptothrix cholodnii SP-6] gb|ACB36526.1| Transketolase central region [Leptothrix cholodnii SP-6] Length = 338 Score = 597 bits (1539), Expect = e-169, Method: Compositional matrix adjust. Identities = 285/332 (85%), Positives = 305/332 (91%) Query: 2 NTVAEKKPRLTTSAMIASIAAEGQRVQAAPFGKALVEYAADRPEIVGMTADLAKYTDLQL 61 T EKKPRLTTSAMIASIA+EGQRV+AAPFGKALVE AA RPEIVGMTADLAKYTDL L Sbjct: 6 TTATEKKPRLTTSAMIASIASEGQRVKAAPFGKALVELAATRPEIVGMTADLAKYTDLHL 65 Query: 62 FQKAYPERFFQMGMAEQLLMAAAGGMAKEGLVPFATTYAVFATRRAYDFIHQVIAEENLN 121 F + YPERF QMGMAEQLLMAAAGGMAKEGL+PFATTYAVF TRRAYDFIHQVIAEENLN Sbjct: 66 FAQVYPERFHQMGMAEQLLMAAAGGMAKEGLIPFATTYAVFGTRRAYDFIHQVIAEENLN 125 Query: 122 VKICCALPGLTTGYGPSHQATEDLAMMRAIPGLTIVDPCDALDLEQAVPQIAEHKGPVYM 181 VK+CCALPGLTTGYGPSHQAT+D+AMMRAIPGLTIVDPCDALDLEQAVPQIA HKGPVYM Sbjct: 126 VKMCCALPGLTTGYGPSHQATDDIAMMRAIPGLTIVDPCDALDLEQAVPQIAAHKGPVYM 185 Query: 182 RLARGNVPLVLDEYDYKFELGKAKELRDGNDVLIISSGFMTMRALEVAKALEADNVSVGV 241 RLARGNVPLVLDEYDY FELGKAK LR+GN+VL+ISSGFMTMRALEVA+ L ADN+ V V Sbjct: 186 RLARGNVPLVLDEYDYSFELGKAKMLREGNEVLVISSGFMTMRALEVAQTLAADNIGVAV 245 Query: 242 LHCPTIKPFDEATVLEQVKKKTRLVVVAENHSVIGGLGEIVASTLMRNRVQPAGFQMAGL 301 LHCPTIKP DEAT++E VK K RLVV+AENHSVIGGLGE VAS L+R+RVQPAGFQMAGL Sbjct: 246 LHCPTIKPLDEATIIEAVKYKHRLVVIAENHSVIGGLGEAVASALLRHRVQPAGFQMAGL 305 Query: 302 PDAFLDAGALPTLHDRYGISCEVLSRRIRDWL 333 PDA+LDAGALPTLHDRYGIS E L+ RI+ WL Sbjct: 306 PDAYLDAGALPTLHDRYGISREALAGRIKGWL 337 >ref|YP_004126990.1| transketolase central region protein [Alicycliphilus denitrificans BC] ref|YP_004388435.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alicycliphilus denitrificans K601] gb|ADV00103.1| Transketolase central region protein [Alicycliphilus denitrificans BC] gb|AEB84919.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alicycliphilus denitrificans K601] Length = 334 Score = 561 bits (1445), Expect = e-158, Method: Compositional matrix adjust. Identities = 268/333 (80%), Positives = 290/333 (87%) Query: 1 MNTVAEKKPRLTTSAMIASIAAEGQRVQAAPFGKALVEYAADRPEIVGMTADLAKYTDLQ 60 MNT +KKPRLTTSAMIASIA EGQRV+AAPFGKALVEYAA RPE+VGMTADLAKYTDL Sbjct: 1 MNTATQKKPRLTTSAMIASIADEGQRVKAAPFGKALVEYAATRPEVVGMTADLAKYTDLH 60 Query: 61 LFQKAYPERFFQMGMAEQLLMAAAGGMAKEGLVPFATTYAVFATRRAYDFIHQVIAEENL 120 LF +AYPERFFQMGMAEQLLM AAGGMAK GLVPFATTYAVF TRRAYDFIHQVIAEENL Sbjct: 61 LFAQAYPERFFQMGMAEQLLMGAAGGMAKTGLVPFATTYAVFGTRRAYDFIHQVIAEENL 120 Query: 121 NVKICCALPGLTTGYGPSHQATEDLAMMRAIPGLTIVDPCDALDLEQAVPQIAEHKGPVY 180 NVKICCALPGLTTGYGPSHQATEDLAMMRAIPGLT+VDPCDALD+EQAVPQIAEH GPVY Sbjct: 121 NVKICCALPGLTTGYGPSHQATEDLAMMRAIPGLTVVDPCDALDIEQAVPQIAEHAGPVY 180 Query: 181 MRLARGNVPLVLDEYDYKFELGKAKELRDGNDVLIISSGFMTMRALEVAKALEADNVSVG 240 MRL RGNVPLVLDEYDY+FELGKAK LRDG DVL+ISSG +TMRALE A+ L D V V Sbjct: 181 MRLLRGNVPLVLDEYDYRFELGKAKLLRDGADVLVISSGLLTMRALEAARQLAGDKVGVA 240 Query: 241 VLHCPTIKPFDEATVLEQVKKKTRLVVVAENHSVIGGLGEIVASTLMRNRVQPAGFQMAG 300 VLHCPTIKP D AT+L + ++ RLVVVAENHS +GGLGE VAS L++ V PA F+M Sbjct: 241 VLHCPTIKPLDAATILAEARRPGRLVVVAENHSAVGGLGEAVASLLLQEGVTPARFRMLA 300 Query: 301 LPDAFLDAGALPTLHDRYGISCEVLSRRIRDWL 333 LPD FLDAGALPTLHDRYGIS ++ ++ WL Sbjct: 301 LPDTFLDAGALPTLHDRYGISTAKVAESLKAWL 333 >ref|YP_002945196.1| transketolase [Variovorax paradoxus S110] gb|ACS19930.1| Transketolase central region [Variovorax paradoxus S110] Length = 332 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 263/333 (78%), Positives = 293/333 (87%), Gaps = 1/333 (0%) Query: 1 MNTVAEKKPRLTTSAMIASIAAEGQRVQAAPFGKALVEYAADRPEIVGMTADLAKYTDLQ 60 M+T EKKPRLTTSAMIASIA+EGQRV AAPFGKALVE RPEIVGMTADLAKYTDL Sbjct: 1 MSTTTEKKPRLTTSAMIASIASEGQRVTAAPFGKALVELGRSRPEIVGMTADLAKYTDLH 60 Query: 61 LFQKAYPERFFQMGMAEQLLMAAAGGMAKEGLVPFATTYAVFATRRAYDFIHQVIAEENL 120 LF K YPERFFQMGMAEQLLMAAAGGMAKEG +PFATTYAVF TRRAYDF+HQVIAEENL Sbjct: 61 LFAKEYPERFFQMGMAEQLLMAAAGGMAKEGFIPFATTYAVFGTRRAYDFVHQVIAEENL 120 Query: 121 NVKICCALPGLTTGYGPSHQATEDLAMMRAIPGLTIVDPCDALDLEQAVPQIAEHKGPVY 180 NVK+CCALPGLTTGYGPSHQATEDLA+MR IPGLTI+DPCDALD+EQAVPQ+A+H+GPVY Sbjct: 121 NVKMCCALPGLTTGYGPSHQATEDLALMRGIPGLTIIDPCDALDIEQAVPQMADHQGPVY 180 Query: 181 MRLARGNVPLVLDEYDYKFELGKAKELRDGNDVLIISSGFMTMRALEVAKALEADNVSVG 240 MRL RGNVP VLDEYDYKFELGKAK +RDG VL+I+SGFMTMR+LEVA+ L D V + Sbjct: 181 MRLPRGNVPRVLDEYDYKFELGKAKLIRDGKSVLVIASGFMTMRSLEVAEQLRNDGVDIA 240 Query: 241 VLHCPTIKPFDEATVLEQVKKKTRLVVVAENHSVIGGLGEIVASTLMRNRVQPAGFQMAG 300 VLH PTIKP DEAT+L +V++ RLVVVAENHSVIGGLGE VA LMR+ V A ++ G Sbjct: 241 VLHVPTIKPLDEATILAEVRRLGRLVVVAENHSVIGGLGEAVAGLLMRSGVSTA-YRQIG 299 Query: 301 LPDAFLDAGALPTLHDRYGISCEVLSRRIRDWL 333 LPDAFLDAGALPTLHDRYGIS +++SR+I+ W+ Sbjct: 300 LPDAFLDAGALPTLHDRYGISAQMMSRQIKGWV 332 >ref|YP_004418437.1| transketolase central region [Pusillimonas sp. T7-7] gb|AEC21813.1| transketolase central region [Pusillimonas sp. T7-7] Length = 333 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 263/334 (78%), Positives = 294/334 (88%), Gaps = 1/334 (0%) Query: 1 MNTVAEKKPRLTTSAMIASIAAEGQRVQAAPFGKALVEYAADRPEIVGMTADLAKYTDLQ 60 MNT + KKP+LTTSAMIASIAAEGQ+V++APFG AL E A RPEIVGMTADLAKYTDL Sbjct: 1 MNTASLKKPKLTTSAMIASIAAEGQQVESAPFGHALAELAKQRPEIVGMTADLAKYTDLH 60 Query: 61 LFQKAYPERFFQMGMAEQLLMAAAGGMAKEGLVPFATTYAVFATRRAYDFIHQVIAEENL 120 +F +A+P+RFFQMGMAEQLLM AAGGMAKEG PF TTYAVF TRRAYDFIHQ+IAEE+L Sbjct: 61 IFAQAHPDRFFQMGMAEQLLMGAAGGMAKEGFTPFVTTYAVFGTRRAYDFIHQIIAEEHL 120 Query: 121 NVKICCALPGLTTGYGPSHQATEDLAMMRAIPGLTIVDPCDALDLEQAVPQIAEHKGPVY 180 NVKICCALPGLTTGYGPSHQAT+D+AMMRA+PGLTIVDPCDALD++QAVP+IA H GPVY Sbjct: 121 NVKICCALPGLTTGYGPSHQATDDIAMMRAVPGLTIVDPCDALDIKQAVPEIAAHPGPVY 180 Query: 181 MRLARGNVPLVLDEYDYKFELGKAKELRDGNDVLIISSGFMTMRALEVAKALEADNVSVG 240 MRL RGNVP+VLDEYDYKFELGKAK L DGNDVLIISSG +TMRALEVAKAL+ +NV V Sbjct: 181 MRLLRGNVPVVLDEYDYKFELGKAKRLCDGNDVLIISSGLLTMRALEVAKALKKENVGVA 240 Query: 241 VLHCPTIKPFDEATVLEQVKKKTRLVVVAENHSVIGGLGEIVASTLMRNRVQPAGFQMAG 300 VLH PTIKP D AT+L++ + RLVVVAENHSV+GGLGE VA L+ N V PA F++AG Sbjct: 241 VLHVPTIKPLDRATILKEAGRSGRLVVVAENHSVMGGLGEAVAVLLLENGVTPA-FRLAG 299 Query: 301 LPDAFLDAGALPTLHDRYGISCEVLSRRIRDWLK 334 LPD FLDAGALPTLHDRYGIS EVLS+RI+ WLK Sbjct: 300 LPDEFLDAGALPTLHDRYGISTEVLSQRIKQWLK 333