BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0163.p (281 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774531.1| transketolase alpha subunit [Herbaspirillum ... 505 e-141 ref|YP_001793290.1| transketolase domain-containing protein [Lep... 487 e-136 ref|YP_002945195.1| transketolase [Variovorax paradoxus S110] >g... 469 e-130 ref|YP_004847923.1| transketolase domain containing protein [Pse... 467 e-129 ref|ZP_03697999.1| Transketolase domain protein [Lutiella nitrof... 466 e-129 >ref|YP_003774531.1| transketolase alpha subunit [Herbaspirillum seropedicae SmR1] gb|ADJ62623.1| transketolase alpha subunit protein [Herbaspirillum seropedicae SmR1] Length = 281 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 241/281 (85%), Positives = 262/281 (93%) Query: 1 MSENLESLRASAYRIRRFAVRMGEVQGQGYIGQALGWADVLAVAYKRAMQIRPMEPEWEG 60 MS+NL +LRASAYRIRR AVRMGEVQGQGYIGQALGWADVLAVAYK AM +RP +P+W G Sbjct: 1 MSDNLANLRASAYRIRRNAVRMGEVQGQGYIGQALGWADVLAVAYKHAMSLRPDDPQWSG 60 Query: 61 RDRFLLSHGHYAIAAYAALIEAGILPEEELETYGSDDSRLPMSGMAAYTPGMEISGGSLG 120 RDRFLLSHGHYAIA YAALIEAGI+P+EEL++YGSDDSRLPMSGMA YTPGMEISGGSLG Sbjct: 61 RDRFLLSHGHYAIALYAALIEAGIVPDEELDSYGSDDSRLPMSGMATYTPGMEISGGSLG 120 Query: 121 QGLAIGVGMALALRHKGSASFVYNSMSDGELDEGATWEAAMGAAHHNLGNLICLVDINNQ 180 QGLAIGVGMAL LR+ + +FVYNSMSDGELDEG+TWEAAMGAAHH LGNLICLVDINNQ Sbjct: 121 QGLAIGVGMALGLRYNNNPAFVYNSMSDGELDEGSTWEAAMGAAHHQLGNLICLVDINNQ 180 Query: 181 QADGPSGKIMGFEPLADKWASFGWHVQRVDGNDLPAVIAAFDQARQLPESKPRVILFDTL 240 QADGPSGKIMGFEPLADKWA+FGW+VQRVDGNDL AV+ AFD AR L ++KPRVILFDTL Sbjct: 181 QADGPSGKIMGFEPLADKWAAFGWYVQRVDGNDLAAVVQAFDNARNLKDAKPRVILFDTL 240 Query: 241 MGKGVPFLEQREKNHFIRVDPPEWQQALNILDQSYKEGSPA 281 MGKGVPFLEQREKNHFIRVDPPEWQQAL+ILDQSY++GS A Sbjct: 241 MGKGVPFLEQREKNHFIRVDPPEWQQALSILDQSYQQGSQA 281 >ref|YP_001793290.1| transketolase domain-containing protein [Leptothrix cholodnii SP-6] gb|ACB36525.1| Transketolase domain protein [Leptothrix cholodnii SP-6] Length = 287 Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust. Identities = 233/277 (84%), Positives = 249/277 (89%) Query: 5 LESLRASAYRIRRFAVRMGEVQGQGYIGQALGWADVLAVAYKRAMQIRPMEPEWEGRDRF 64 L LR AYRIRR A+RMGEVQGQGYIGQALGWADVLAVAY A+ +RP EPEWEGRDRF Sbjct: 11 LAELRQVAYRIRRNALRMGEVQGQGYIGQALGWADVLAVAYGHALNLRPDEPEWEGRDRF 70 Query: 65 LLSHGHYAIAAYAALIEAGILPEEELETYGSDDSRLPMSGMAAYTPGMEISGGSLGQGLA 124 LLSHGHYAIA+YAALIEAGI+PE ELETYGSDDSRLPMSGMA YTPGMEISGGSLGQGLA Sbjct: 71 LLSHGHYAIASYAALIEAGIIPESELETYGSDDSRLPMSGMATYTPGMEISGGSLGQGLA 130 Query: 125 IGVGMALALRHKGSASFVYNSMSDGELDEGATWEAAMGAAHHNLGNLICLVDINNQQADG 184 IGVGMAL L+HK + +F+YNSMSDGELDEGA WEAAMGAAHH L NLICL+DINNQQADG Sbjct: 131 IGVGMALGLKHKKNPAFIYNSMSDGELDEGAVWEAAMGAAHHRLDNLICLIDINNQQADG 190 Query: 185 PSGKIMGFEPLADKWASFGWHVQRVDGNDLPAVIAAFDQARQLPESKPRVILFDTLMGKG 244 PS K+MGFEPLADKWA+FGWHVQRVDGNDL AV+ AFD AR L E+KPRVILFDTLMGKG Sbjct: 191 PSSKVMGFEPLADKWAAFGWHVQRVDGNDLAAVLEAFDAARNLTEAKPRVILFDTLMGKG 250 Query: 245 VPFLEQREKNHFIRVDPPEWQQALNILDQSYKEGSPA 281 VPFLE R+KNHFIRVDPPEWQQAL ILDQS EG+ A Sbjct: 251 VPFLETRDKNHFIRVDPPEWQQALQILDQSQAEGAQA 287 >ref|YP_002945195.1| transketolase [Variovorax paradoxus S110] gb|ACS19929.1| Transketolase domain protein [Variovorax paradoxus S110] Length = 279 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 226/276 (81%), Positives = 246/276 (89%) Query: 4 NLESLRASAYRIRRFAVRMGEVQGQGYIGQALGWADVLAVAYKRAMQIRPMEPEWEGRDR 63 +L +L+ SA RIR +A+RMGEVQGQGYIGQALGWADVLAVAYK A+ RP EP+WEGRDR Sbjct: 3 DLSTLQQSARRIRAYALRMGEVQGQGYIGQALGWADVLAVAYKHALAYRPEEPKWEGRDR 62 Query: 64 FLLSHGHYAIAAYAALIEAGILPEEELETYGSDDSRLPMSGMAAYTPGMEISGGSLGQGL 123 FLLSHGHYAIA YAALIEAGI+PEEELETYGSDDSRLPMSGMA YTPGME+SGGSLGQGL Sbjct: 63 FLLSHGHYAIAFYAALIEAGIIPEEELETYGSDDSRLPMSGMATYTPGMEMSGGSLGQGL 122 Query: 124 AIGVGMALALRHKGSASFVYNSMSDGELDEGATWEAAMGAAHHNLGNLICLVDINNQQAD 183 I VGMAL LR K + +FVYNSMSDGELDEG+TWEAAMGAAHH L NLICLVDINNQQAD Sbjct: 123 PIAVGMALGLRLKNNPAFVYNSMSDGELDEGSTWEAAMGAAHHRLPNLICLVDINNQQAD 182 Query: 184 GPSGKIMGFEPLADKWASFGWHVQRVDGNDLPAVIAAFDQARQLPESKPRVILFDTLMGK 243 GPSGKIMGFEPLA KW +FGWHVQRVDGNDLPAV+AAFD AR L E KPRVILFDTLMG+ Sbjct: 183 GPSGKIMGFEPLAAKWEAFGWHVQRVDGNDLPAVMAAFDAARALKEEKPRVILFDTLMGR 242 Query: 244 GVPFLEQREKNHFIRVDPPEWQQALNILDQSYKEGS 279 GVPFLE R+KNHFIRVDPPEWQQA+ +D + EG+ Sbjct: 243 GVPFLETRDKNHFIRVDPPEWQQAIAHVDSAQSEGA 278 >ref|YP_004847923.1| transketolase domain containing protein [Pseudogulbenkiania sp. NH8B] dbj|BAK77509.1| transketolase domain protein [Pseudogulbenkiania sp. NH8B] Length = 284 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 222/271 (81%), Positives = 242/271 (89%) Query: 7 SLRASAYRIRRFAVRMGEVQGQGYIGQALGWADVLAVAYKRAMQIRPMEPEWEGRDRFLL 66 +L AYRIRR+A++MGEVQGQGY+GQALGWADVLAVAY AM RP EPEWEGRDRFLL Sbjct: 11 TLADRAYRIRRYALQMGEVQGQGYVGQALGWADVLAVAYGHAMNYRPEEPEWEGRDRFLL 70 Query: 67 SHGHYAIAAYAALIEAGILPEEELETYGSDDSRLPMSGMAAYTPGMEISGGSLGQGLAIG 126 SHGHYAIA YAALIEAGI+PE ELETYGSDDSRLPMSGMA YTPGMEISGGSLGQGL IG Sbjct: 71 SHGHYAIALYAALIEAGIIPESELETYGSDDSRLPMSGMATYTPGMEISGGSLGQGLPIG 130 Query: 127 VGMALALRHKGSASFVYNSMSDGELDEGATWEAAMGAAHHNLGNLICLVDINNQQADGPS 186 VGMAL LR K + +FVYNSMSDGELDEG+TWEAAM AAHH L NLICLVDINNQQADGPS Sbjct: 131 VGMALGLRFKNNPAFVYNSMSDGELDEGSTWEAAMSAAHHGLSNLICLVDINNQQADGPS 190 Query: 187 GKIMGFEPLADKWASFGWHVQRVDGNDLPAVIAAFDQARQLPESKPRVILFDTLMGKGVP 246 K++GFEPLADKWA+FGWHVQRVDGNDLPAVI AFD AR L ++PRVILFDTLMGKG+P Sbjct: 191 SKVLGFEPLADKWAAFGWHVQRVDGNDLPAVIEAFDTARNLQTAQPRVILFDTLMGKGIP 250 Query: 247 FLEQREKNHFIRVDPPEWQQALNILDQSYKE 277 FLEQR+KNHFIRV+ EWQQA+ ILDQS ++ Sbjct: 251 FLEQRDKNHFIRVEAAEWQQAITILDQSQQQ 281 >ref|ZP_03697999.1| Transketolase domain protein [Lutiella nitroferrum 2002] gb|EEG08741.1| Transketolase domain protein [Lutiella nitroferrum 2002] Length = 284 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 221/271 (81%), Positives = 242/271 (89%) Query: 7 SLRASAYRIRRFAVRMGEVQGQGYIGQALGWADVLAVAYKRAMQIRPMEPEWEGRDRFLL 66 +L AYRIRR+A++MGEVQGQGY+GQALGWADVLAVAY AM RP EPEWEGRDRFLL Sbjct: 11 TLADRAYRIRRYALQMGEVQGQGYVGQALGWADVLAVAYGHAMNYRPEEPEWEGRDRFLL 70 Query: 67 SHGHYAIAAYAALIEAGILPEEELETYGSDDSRLPMSGMAAYTPGMEISGGSLGQGLAIG 126 SHGHYAIA YAALIEAGI+PE ELETYGSDDSRLPMSGMA YTPGMEISGGSLGQGL IG Sbjct: 71 SHGHYAIALYAALIEAGIIPESELETYGSDDSRLPMSGMATYTPGMEISGGSLGQGLPIG 130 Query: 127 VGMALALRHKGSASFVYNSMSDGELDEGATWEAAMGAAHHNLGNLICLVDINNQQADGPS 186 VGMAL LR K + +FVYNSMSDGELDEG+TWEAAM AAHH L NLICLVDINNQQADGPS Sbjct: 131 VGMALGLRFKNNPAFVYNSMSDGELDEGSTWEAAMSAAHHGLSNLICLVDINNQQADGPS 190 Query: 187 GKIMGFEPLADKWASFGWHVQRVDGNDLPAVIAAFDQARQLPESKPRVILFDTLMGKGVP 246 K++GFEPLADKWA+FGWHVQR+DGNDLPAVI AFD AR L ++PRVILFDTLMGKG+P Sbjct: 191 SKVLGFEPLADKWAAFGWHVQRIDGNDLPAVIEAFDTARNLQTAQPRVILFDTLMGKGIP 250 Query: 247 FLEQREKNHFIRVDPPEWQQALNILDQSYKE 277 FLEQR+KNHFIRV+ EWQQA+ ILDQS ++ Sbjct: 251 FLEQRDKNHFIRVEAAEWQQAIAILDQSQQQ 281