BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0159.p         (117 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001793286.1| short-chain dehydrogenase/reductase SDR [Lep...   206   1e-51
ref|YP_003774534.1| dehydrogenase [Herbaspirillum seropedicae Sm...   203   7e-51
ref|YP_002945192.1| short-chain dehydrogenase/reductase SDR [Var...   199   9e-50
ref|YP_003773938.1| 3-oxoacyl-[acyl-carrier-protein] reductase [...   177   5e-43
ref|YP_001561763.1| short-chain dehydrogenase/reductase SDR [Del...   174   6e-42

>ref|YP_001793286.1| short-chain dehydrogenase/reductase SDR [Leptothrix cholodnii SP-6]
 gb|ACB36521.1| short-chain dehydrogenase/reductase SDR [Leptothrix cholodnii SP-6]
          Length = 249

 Score =  206 bits (523), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 101/106 (95%), Positives = 104/106 (98%)

Query: 12  RRGGGILGGPHYSAAKAGVLGLARAMAREFGPDGIRVNSIAPGLIGTDIIKGKLTEEKKA 71
           +RGGGILGGPHYSAAKAGVLGLARAMAREFGPDGIR+N I PGLIGTDIIKGKLTEEKKA
Sbjct: 144 QRGGGILGGPHYSAAKAGVLGLARAMAREFGPDGIRINCITPGLIGTDIIKGKLTEEKKA 203

Query: 72  DIAETIPLARLGRADDIGGACVFLASDLSLYCTGITLDVNGGMLIH 117
           +IAETIPLARLGRADDIGGACVFLASDLSLYCTGITLDVNGGMLIH
Sbjct: 204 EIAETIPLARLGRADDIGGACVFLASDLSLYCTGITLDVNGGMLIH 249


>ref|YP_003774534.1| dehydrogenase [Herbaspirillum seropedicae SmR1]
 gb|ADJ62626.1| dehydrogenase protein [Herbaspirillum seropedicae SmR1]
          Length = 249

 Score =  203 bits (517), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 100/106 (94%), Positives = 103/106 (97%)

Query: 12  RRGGGILGGPHYSAAKAGVLGLARAMAREFGPDGIRVNSIAPGLIGTDIIKGKLTEEKKA 71
           +RGGGILGGPHYSAAKAGVLGLARAMAREFGP+GIRVNSI PGLIGTDIIKGKLTEEKKA
Sbjct: 144 QRGGGILGGPHYSAAKAGVLGLARAMAREFGPEGIRVNSITPGLIGTDIIKGKLTEEKKA 203

Query: 72  DIAETIPLARLGRADDIGGACVFLASDLSLYCTGITLDVNGGMLIH 117
           +IAETIPLARLGRADDIGGACVFL SDLS YCTGITLDVNGGMLIH
Sbjct: 204 EIAETIPLARLGRADDIGGACVFLGSDLSQYCTGITLDVNGGMLIH 249


>ref|YP_002945192.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110]
 gb|ACS19926.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110]
          Length = 249

 Score =  199 bits (507), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 97/106 (91%), Positives = 103/106 (97%)

Query: 12  RRGGGILGGPHYSAAKAGVLGLARAMAREFGPDGIRVNSIAPGLIGTDIIKGKLTEEKKA 71
           +RGGGILGGPHYSAAKAGVLGLARAMAREFGP+GIR+NSI PGLIGTDIIKG+LTEEKKA
Sbjct: 144 QRGGGILGGPHYSAAKAGVLGLARAMAREFGPEGIRINSITPGLIGTDIIKGRLTEEKKA 203

Query: 72  DIAETIPLARLGRADDIGGACVFLASDLSLYCTGITLDVNGGMLIH 117
           +IAETIPL RLGRA+DI GACVFLASDLSLYCTGITLDVNGGMLIH
Sbjct: 204 EIAETIPLGRLGRANDIAGACVFLASDLSLYCTGITLDVNGGMLIH 249


>ref|YP_003773938.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ62030.1| 3-oxoacyl-[acyl-carrier-protein] reductase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 249

 Score =  177 bits (449), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 87/106 (82%), Positives = 93/106 (87%)

Query: 12  RRGGGILGGPHYSAAKAGVLGLARAMAREFGPDGIRVNSIAPGLIGTDIIKGKLTEEKKA 71
           +RGGGILGGPHYSAAKAGVLGLARAMAREFGP GIRVN I PGLI TDI K  L+ EKKA
Sbjct: 144 QRGGGILGGPHYSAAKAGVLGLARAMAREFGPQGIRVNCITPGLISTDINKDILSAEKKA 203

Query: 72  DIAETIPLARLGRADDIGGACVFLASDLSLYCTGITLDVNGGMLIH 117
           +IA+TIPL RLG  DD+GG CVFLASDLS YCTG+TLDVNGGMLIH
Sbjct: 204 EIAQTIPLGRLGGPDDVGGVCVFLASDLSQYCTGVTLDVNGGMLIH 249


>ref|YP_001561763.1| short-chain dehydrogenase/reductase SDR [Delftia acidovorans SPH-1]
 gb|ABX33378.1| short-chain dehydrogenase/reductase SDR [Delftia acidovorans SPH-1]
          Length = 249

 Score =  174 bits (440), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 85/106 (80%), Positives = 94/106 (88%)

Query: 12  RRGGGILGGPHYSAAKAGVLGLARAMAREFGPDGIRVNSIAPGLIGTDIIKGKLTEEKKA 71
           +RGGGI GGPHYSAAKAGVLGLARAMAREFG DGIR+N + PGLI TDI +GKL  E+K 
Sbjct: 144 QRGGGIFGGPHYSAAKAGVLGLARAMAREFGGDGIRINCVTPGLIETDITQGKLGPERKR 203

Query: 72  DIAETIPLARLGRADDIGGACVFLASDLSLYCTGITLDVNGGMLIH 117
           +I+ TIPLARLGRADD+ GACVFLASDL+ YCTGITLDVNGGMLIH
Sbjct: 204 EISATIPLARLGRADDVAGACVFLASDLAGYCTGITLDVNGGMLIH 249