BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0152.p (306 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002501949.1| LysR family transcriptional regulator [Methy... 408 e-112 ref|YP_001767558.1| LysR family transcriptional regulator [Methy... 407 e-112 ref|YP_001524811.1| transcriptional regulator [Azorhizobium caul... 398 e-109 gb|EGP54999.1| LysR family transcriptional regulator [Agrobacter... 392 e-107 ref|NP_357446.1| LysR family transcriptional regulator [Agrobact... 387 e-106 >ref|YP_002501949.1| LysR family transcriptional regulator [Methylobacterium nodulans ORS 2060] gb|ACL61646.1| transcriptional regulator, LysR family [Methylobacterium nodulans ORS 2060] Length = 303 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/298 (64%), Positives = 233/298 (78%) Query: 1 MYLPLRSISVFHAVARSGSISSAAEELNVTPSAVSQQIQALETHLGTSLMVKVGRGVALT 60 M +P R+ISVFHAVARSGSI+ AA+EL VTPSAVSQQIQ LE LGT+L+ K GR + LT Sbjct: 1 MPVPFRAISVFHAVARSGSITRAADELGVTPSAVSQQIQTLEVSLGTALIGKSGRNIVLT 60 Query: 61 EAGERYFSMIAEEIDRISEATQSIRGLRPVTLLTVRATPTLSSKWLLPRLRSFLDAHPDL 120 EAGERYF MI EIDRI EATQ I+G R VT LTVRATP+LS+KWLLPRL +F++AHPD+ Sbjct: 61 EAGERYFEMIGGEIDRIMEATQRIQGFRSVTTLTVRATPSLSTKWLLPRLAAFVEAHPDI 120 Query: 121 EVRLNGTNEVTDFTRETVDVEIRHGRGQWPGLFTEGLTEEWFFPVCSPGYAAAGSMSVAD 180 E+RL+GTNE F +E+VD+EIRHG G WPGL+ EGL EE F PVC+P AA GS+ D Sbjct: 121 ELRLDGTNEPAAFQKESVDLEIRHGTGGWPGLYAEGLVEENFRPVCAPSLAAPGSLGPED 180 Query: 181 VAQHRLIQSVKSQVQWPYWFSMSKITPPNQMRRVLFDRSHMAVDAAADGIGLALESSLMM 240 +A+HRLI SVKSQVQW +WF ++ + P + RR+LFDR+HMA+DAAA G+G+ALES LM+ Sbjct: 181 LARHRLIHSVKSQVQWGHWFKLAGVAPATRWRRLLFDRTHMAIDAAAGGLGIALESDLML 240 Query: 241 WRELRDGNLVCPVRNPPRISQTTQWIVCPVDHLRKNKVSVFIDWLRVEVAQWQAEQAQ 298 W +L L CPVR+PPRI+ TQWI CP DHLR KV F+DWLR E W AE+AQ Sbjct: 241 WGDLASNRLACPVRDPPRIALVTQWITCPHDHLRYRKVRAFLDWLRTERDSWAAERAQ 298 >ref|YP_001767558.1| LysR family transcriptional regulator [Methylobacterium sp. 4-46] gb|ACA15124.1| transcriptional regulator, LysR family [Methylobacterium sp. 4-46] Length = 300 Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/300 (64%), Positives = 234/300 (78%) Query: 1 MYLPLRSISVFHAVARSGSISSAAEELNVTPSAVSQQIQALETHLGTSLMVKVGRGVALT 60 M +PLR+I+VFHAVARSGSI+ AAEEL VTPSAVSQQIQ LE LGT+L+ K GR V LT Sbjct: 1 MPVPLRAITVFHAVARSGSITRAAEELGVTPSAVSQQIQTLEVGLGTALIGKAGRNVVLT 60 Query: 61 EAGERYFSMIAEEIDRISEATQSIRGLRPVTLLTVRATPTLSSKWLLPRLRSFLDAHPDL 120 EAGERYF MI EIDRI EATQ I+G R VT LTVRATP+LS+KWLLPRL FLDAHPDL Sbjct: 61 EAGERYFEMIGGEIDRIMEATQRIQGFRSVTTLTVRATPSLSTKWLLPRLARFLDAHPDL 120 Query: 121 EVRLNGTNEVTDFTRETVDVEIRHGRGQWPGLFTEGLTEEWFFPVCSPGYAAAGSMSVAD 180 E+RL+GTNE T F +E+VD+EIRHG G WPGL+ EGL EE F PVC+P AA GS++ + Sbjct: 121 ELRLDGTNEPTAFQKESVDIEIRHGTGGWPGLYAEGLVEECFRPVCAPALAAPGSLAPGE 180 Query: 181 VAQHRLIQSVKSQVQWPYWFSMSKITPPNQMRRVLFDRSHMAVDAAADGIGLALESSLMM 240 + +HRLI SVKSQ+QW +WF ++ P + RR+LFDR+HMA+DAAA G+G+ALES LM+ Sbjct: 181 LHRHRLIHSVKSQMQWAHWFKLAGTAPAARWRRLLFDRTHMAIDAAAGGLGIALESDLML 240 Query: 241 WRELRDGNLVCPVRNPPRISQTTQWIVCPVDHLRKNKVSVFIDWLRVEVAQWQAEQAQYL 300 W +LR G L CPVR+PPR + TQW+ CP DHLR KV F+DW+R E +W +A+ L Sbjct: 241 WDDLRSGRLACPVRDPPRTALVTQWVTCPPDHLRLRKVQAFLDWIRRERDEWARARAETL 300 >ref|YP_001524811.1| transcriptional regulator [Azorhizobium caulinodans ORS 571] dbj|BAF87893.1| transcriptional regulator [Azorhizobium caulinodans ORS 571] Length = 300 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/294 (64%), Positives = 231/294 (78%) Query: 1 MYLPLRSISVFHAVARSGSISSAAEELNVTPSAVSQQIQALETHLGTSLMVKVGRGVALT 60 M +PLR+I VFHAVAR+GS++ AA+EL VTPSAVSQQ+QALE LGT+L+ K GR V LT Sbjct: 1 MQVPLRAIGVFHAVARTGSVTRAADELGVTPSAVSQQVQALEISLGTALIGKAGRNVVLT 60 Query: 61 EAGERYFSMIAEEIDRISEATQSIRGLRPVTLLTVRATPTLSSKWLLPRLRSFLDAHPDL 120 EAGERYF MI E++RI+EATQ IRG R VT LTVRATP+L++KWLLPRL F+DAHP++ Sbjct: 61 EAGERYFEMIRGEVERITEATQRIRGFRSVTTLTVRATPSLATKWLLPRLAGFIDAHPEI 120 Query: 121 EVRLNGTNEVTDFTRETVDVEIRHGRGQWPGLFTEGLTEEWFFPVCSPGYAAAGSMSVAD 180 E+RL+GTNE T F +E VDVEIRHG GQWPGL EGL EE F PVCSP AAAGS++ D Sbjct: 121 ELRLDGTNEPTAFQKENVDVEIRHGTGQWPGLVAEGLVEERFLPVCSPALAAAGSLAAED 180 Query: 181 VAQHRLIQSVKSQVQWPYWFSMSKITPPNQMRRVLFDRSHMAVDAAADGIGLALESSLMM 240 + + RLI SVKSQVQWPYWF+ + +TP ++RR+ FDR+HMA+DAA G+G+ALES LMM Sbjct: 181 LPRFRLIHSVKSQVQWPYWFTCAGVTPAERLRRLFFDRTHMAIDAAVGGLGIALESDLMM 240 Query: 241 WRELRDGNLVCPVRNPPRISQTTQWIVCPVDHLRKNKVSVFIDWLRVEVAQWQA 294 W E DG L+CP+ PPRI+ TQW CP DHLR +KV +F DWLR E W A Sbjct: 241 WAEKHDGRLICPIAEPPRITLVTQWATCPPDHLRHSKVKLFFDWLRRERDNWLA 294 >gb|EGP54999.1| LysR family transcriptional regulator [Agrobacterium tumefaciens F2] Length = 300 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 188/298 (63%), Positives = 232/298 (77%) Query: 1 MYLPLRSISVFHAVARSGSISSAAEELNVTPSAVSQQIQALETHLGTSLMVKVGRGVALT 60 M +P++SI VFHA AR+GSIS AAEEL+VTPSAVSQQIQ LE LGT+LM + GR V LT Sbjct: 1 MQIPIKSILVFHAAARAGSISRAAEELSVTPSAVSQQIQLLEGQLGTTLMARTGRKVTLT 60 Query: 61 EAGERYFSMIAEEIDRISEATQSIRGLRPVTLLTVRATPTLSSKWLLPRLRSFLDAHPDL 120 EAGERYFSMI +I++I++AT SIRG R VT LT+RATPT+S+KWLLPRL SFL+ HP+L Sbjct: 61 EAGERYFSMITAQIEQIADATDSIRGFRSVTTLTIRATPTISNKWLLPRLGSFLEEHPEL 120 Query: 121 EVRLNGTNEVTDFTRETVDVEIRHGRGQWPGLFTEGLTEEWFFPVCSPGYAAAGSMSVAD 180 EVRL+GTNE TDF++E VD+E+RHG G+WPGLF EGL EE F PVCSP Y AG+ + + Sbjct: 121 EVRLDGTNEPTDFSQELVDIELRHGDGRWPGLFVEGLVEEEFLPVCSPNYPRAGAYAPEE 180 Query: 181 VAQHRLIQSVKSQVQWPYWFSMSKITPPNQMRRVLFDRSHMAVDAAADGIGLALESSLMM 240 + RLI SVK+Q QW +WF ++ +T + RRVLFDRSHMA+DAA GIG+ALES+LMM Sbjct: 181 LQNQRLIHSVKAQAQWNHWFPLAGVTAEKRWRRVLFDRSHMAIDAAVLGIGVALESTLMM 240 Query: 241 WRELRDGNLVCPVRNPPRISQTTQWIVCPVDHLRKNKVSVFIDWLRVEVAQWQAEQAQ 298 +ELR G L+ V + PRI TQWIVCP HLR+ KV +F+DWLR E W++ AQ Sbjct: 241 EQELRSGALIAAVPDAPRIRLVTQWIVCPHAHLRQKKVRIFLDWLRKERDDWKSRPAQ 298 >ref|NP_357446.1| LysR family transcriptional regulator [Agrobacterium tumefaciens str. C58] gb|AAK90231.1| transcriptional regulator, LysR family [Agrobacterium tumefaciens str. C58] Length = 298 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/293 (63%), Positives = 228/293 (77%) Query: 1 MYLPLRSISVFHAVARSGSISSAAEELNVTPSAVSQQIQALETHLGTSLMVKVGRGVALT 60 M +P++SI VFHA AR+GSIS AAEEL+VTPSAVSQQIQ LE LGT+LM + GR V LT Sbjct: 1 MQIPIKSILVFHAAARAGSISRAAEELSVTPSAVSQQIQLLEGQLGTTLMARTGRKVTLT 60 Query: 61 EAGERYFSMIAEEIDRISEATQSIRGLRPVTLLTVRATPTLSSKWLLPRLRSFLDAHPDL 120 EAGERYFSMI +I++IS+AT SIRG R VT LT+RATPT+S+KWLLPRL SFL+ HP+L Sbjct: 61 EAGERYFSMITAQIEQISDATDSIRGFRSVTTLTIRATPTISNKWLLPRLGSFLEEHPEL 120 Query: 121 EVRLNGTNEVTDFTRETVDVEIRHGRGQWPGLFTEGLTEEWFFPVCSPGYAAAGSMSVAD 180 EVRL+GTNE TDF++E VD+E+RHG G+WPGLF EGL EE F PVCSP Y AG + Sbjct: 121 EVRLDGTNEPTDFSQELVDIELRHGDGRWPGLFVEGLVEEEFLPVCSPNYQGAGKFLPEE 180 Query: 181 VAQHRLIQSVKSQVQWPYWFSMSKITPPNQMRRVLFDRSHMAVDAAADGIGLALESSLMM 240 + RLI SVK+Q QW +WF ++ +T + RRVLFDRSHMA+DAA GIG+ALES+LMM Sbjct: 181 LQNERLIHSVKAQAQWNHWFPLAGVTAEKRWRRVLFDRSHMAIDAAVLGIGVALESTLMM 240 Query: 241 WRELRDGNLVCPVRNPPRISQTTQWIVCPVDHLRKNKVSVFIDWLRVEVAQWQ 293 REL+D LV V + PRI TQWIVCP HLR+ KV +F++W+R + +WQ Sbjct: 241 ERELQDKMLVPAVADAPRIKLVTQWIVCPHSHLRQRKVMLFLEWMRKQRDEWQ 293