BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0148.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004752458.1| putative dipeptide transport binding transme... 522 e-146 ref|YP_001355212.1| ABC-type transport system, periplasmic compo... 473 e-131 ref|YP_001101522.1| putative dipeptide transport binding transme... 450 e-124 ref|YP_296541.1| extracellular solute-binding protein [Ralstonia... 373 e-101 gb|EGW60984.1| extracellular solute-binding protein family 5 [De... 369 e-100 >ref|YP_004752458.1| putative dipeptide transport binding transmembrane protein [Collimonas fungivorans Ter331] gb|AEK61635.1| putative dipeptide transport binding transmembrane protein [Collimonas fungivorans Ter331] Length = 535 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 242/292 (82%), Positives = 273/292 (93%) Query: 1 LLAGEVDAIDSVPPADVPKLKTNPKFSLVQRTSWRTIFWTLDQSRDKTPDITDKSGKPLD 60 LLAGEVDAI++VPPAD+ KLKTNP+F L Q+ SWRTIFWTLDQSRDK+PDITDK+GKPLD Sbjct: 244 LLAGEVDAIENVPPADLAKLKTNPQFKLAQKISWRTIFWTLDQSRDKSPDITDKAGKPLD 303 Query: 61 KNPLKDIRVRQAISKAINRQALTERTLEGLGTPASNIVAPGILGYADNLKVEKYDPEGAK 120 KNPLKD+RVRQAISKAINRQAL +RTLEGL PASNI+APGILGYAD LKVEKYDPEGAK Sbjct: 304 KNPLKDVRVRQAISKAINRQALVDRTLEGLAVPASNIIAPGILGYADTLKVEKYDPEGAK 363 Query: 121 KLLAAAGYPNGFALTLHGPNNRYINDERVVQTVAQFLSRIGIQTKVETFPLSVYFGKARN 180 KLLAAAGYPNGF +TLHGPNNRYINDERVVQTVAQFL+R+GIQ KVET PL+VYFGKAR Sbjct: 364 KLLAAAGYPNGFGITLHGPNNRYINDERVVQTVAQFLNRVGIQAKVETLPLAVYFGKARA 423 Query: 181 GDFSVALLGWGTLAGDFGLRTLVGTTDASTGWGSWNWGKYSNPQVDKLVQSSLGSVDEKQ 240 G++S ALLGWGTLAGDFGLRTL+GTT+ TGWGSWNWGKY+NP++D+LVQSSL SVD+KQ Sbjct: 424 GEYSAALLGWGTLAGDFGLRTLLGTTNPDTGWGSWNWGKYTNPKLDQLVQSSLASVDQKQ 483 Query: 241 RQEFAKQAATVALNDYAVIPLHHQYATWAVRKGLKYTPRIDEFTFAHQFHPQ 292 R++FA+Q A VALNDYA+IPL+HQYATWA+RKGLKYTPR DEFTFA+QFHP+ Sbjct: 484 REDFARQGAVVALNDYALIPLYHQYATWALRKGLKYTPRTDEFTFAYQFHPE 535 >ref|YP_001355212.1| ABC-type transport system, periplasmic component [Janthinobacterium sp. Marseille] gb|ABR91078.1| ABC-type transport system, periplasmic component [Janthinobacterium sp. Marseille] Length = 522 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 222/292 (76%), Positives = 254/292 (86%) Query: 1 LLAGEVDAIDSVPPADVPKLKTNPKFSLVQRTSWRTIFWTLDQSRDKTPDITDKSGKPLD 60 LL+G+VDAI+ VP AD+ KLK N KF L Q+ SWRTIFW +DQS + +TDK+GKPL Sbjct: 231 LLSGDVDAIEGVPTADLSKLKGNAKFKLEQKISWRTIFWEIDQSERSSRYVTDKAGKPLP 290 Query: 61 KNPLKDIRVRQAISKAINRQALTERTLEGLGTPASNIVAPGILGYADNLKVEKYDPEGAK 120 KNPL+DIRVRQAISKAINRQAL +RT+EGL PASNIVAPG+LGY D LKVE YDPEGAK Sbjct: 291 KNPLRDIRVRQAISKAINRQALVDRTMEGLAVPASNIVAPGLLGYNDALKVEAYDPEGAK 350 Query: 121 KLLAAAGYPNGFALTLHGPNNRYINDERVVQTVAQFLSRIGIQTKVETFPLSVYFGKARN 180 KLLA AGYPNGF LTLHGPN+RYIND +VVQTVAQFL+RIGIQTKVET PLSVYF KAR Sbjct: 351 KLLAEAGYPNGFVLTLHGPNDRYINDAQVVQTVAQFLNRIGIQTKVETLPLSVYFSKARA 410 Query: 181 GDFSVALLGWGTLAGDFGLRTLVGTTDASTGWGSWNWGKYSNPQVDKLVQSSLGSVDEKQ 240 G+FSVALLGWGTLAGDFGLRTLVGT++ GWG+WNWGKYSNP +DKL+ +SLGSVD+ + Sbjct: 411 GEFSVALLGWGTLAGDFGLRTLVGTSNPDIGWGTWNWGKYSNPALDKLIAASLGSVDQAK 470 Query: 241 RQEFAKQAATVALNDYAVIPLHHQYATWAVRKGLKYTPRIDEFTFAHQFHPQ 292 R+ +AK+AA VA+ DYAV+PLHHQYATWA+RKGLKYT R DEFTFAHQFHP+ Sbjct: 471 REGYAKEAAAVAMKDYAVVPLHHQYATWAMRKGLKYTARTDEFTFAHQFHPE 522 >ref|YP_001101522.1| putative dipeptide transport binding transmembrane protein [Herminiimonas arsenicoxydans] emb|CAL63401.1| putative periplasmic dipeptide transport protein precursor (Dipeptide-binding protein) (DBP) DppA-like [Herminiimonas arsenicoxydans] Length = 528 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 221/292 (75%), Positives = 250/292 (85%) Query: 1 LLAGEVDAIDSVPPADVPKLKTNPKFSLVQRTSWRTIFWTLDQSRDKTPDITDKSGKPLD 60 LL+G+VDAI+ VP AD+ +LK+N KFS Q+ SWRTIFW LDQS + +TDKSGKPL Sbjct: 237 LLSGDVDAIEGVPTADLSRLKSNAKFSFAQKISWRTIFWELDQSPGASRYVTDKSGKPLP 296 Query: 61 KNPLKDIRVRQAISKAINRQALTERTLEGLGTPASNIVAPGILGYADNLKVEKYDPEGAK 120 NPL D+RVRQA+SKAINRQAL ERT+EGL PASNIV+PGI GY D LKVE YDPEGAK Sbjct: 297 NNPLHDVRVRQAMSKAINRQALVERTMEGLAVPASNIVSPGIFGYNDALKVEVYDPEGAK 356 Query: 121 KLLAAAGYPNGFALTLHGPNNRYINDERVVQTVAQFLSRIGIQTKVETFPLSVYFGKARN 180 KLLA AGYP+GFALT+HGPN+RYINDE+VVQTVAQF +RIGIQTKV T PLSVYF KAR Sbjct: 357 KLLAQAGYPHGFALTIHGPNDRYINDEQVVQTVAQFWNRIGIQTKVATLPLSVYFAKARA 416 Query: 181 GDFSVALLGWGTLAGDFGLRTLVGTTDASTGWGSWNWGKYSNPQVDKLVQSSLGSVDEKQ 240 G+FSV+LLGWGTLAGDFGLRTLVGT + TGWGSWNWGKYSNP VDKL+ SSL SVD+ + Sbjct: 417 GEFSVSLLGWGTLAGDFGLRTLVGTPNVETGWGSWNWGKYSNPAVDKLIASSLSSVDQGK 476 Query: 241 RQEFAKQAATVALNDYAVIPLHHQYATWAVRKGLKYTPRIDEFTFAHQFHPQ 292 R FAK+AA +AL DYAV+PLHHQYATWA+RKGLKYT R DEFTFAHQFHP+ Sbjct: 477 RVAFAKEAAALALKDYAVVPLHHQYATWAMRKGLKYTARTDEFTFAHQFHPE 528 >ref|YP_296541.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gb|AAZ61697.1| extracellular solute-binding protein, family 5 [Ralstonia eutropha JMP134] Length = 531 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 179/293 (61%), Positives = 218/293 (74%), Gaps = 2/293 (0%) Query: 1 LLAGEVDAIDSVPPADVPKLKTNPKFSLVQRTSWRTIFWTLDQSRDKTPDITDKSGKPLD 60 LLAG+VD I+SVP ADV KLK NPKF + Q SWRTIFW +DQSRD P +TDK+GKPL Sbjct: 240 LLAGDVDVIESVPAADVAKLKQNPKFRIEQTVSWRTIFWQMDQSRDNPPYVTDKAGKPLG 299 Query: 61 KNPLKDIRVRQAISKAINRQALTERTLEGLGTPASNIVAPGILGYADNLKVEKYDPEGAK 120 KNP KD RVR AISKA+NR A+ R +EGL PAS++V+P I G+ K + YDPEGAK Sbjct: 300 KNPFKDARVRAAISKALNRDAIVSRIMEGLAVPASSLVSPQIFGHP-GTKPDAYDPEGAK 358 Query: 121 KLLAAAGYPNGFALTLHGPNNRYINDERVVQTVAQFLSRIGIQTKVETFPLSVYFGKARN 180 KLLAAAGYPNGF LTLH NNRY+ND V Q A L+R+GIQTKVET P++ YF +AR Sbjct: 359 KLLAAAGYPNGFGLTLHATNNRYLNDAAVAQATASMLTRVGIQTKVETLPVAAYFTRARQ 418 Query: 181 GDFSVALLGWGTLAGDFGLRTLVGTTDASTGWGSWNWGKYSNPQVDKLVQSSLGSV-DEK 239 GDFS +LGWG+ A D LR++ GT D TG+G+WNWGKYSNPQ+DKL++ SL +V +K Sbjct: 419 GDFSFEMLGWGSAAADVALRSIAGTPDPKTGYGTWNWGKYSNPQLDKLIEKSLTTVSSDK 478 Query: 240 QRQEFAKQAATVALNDYAVIPLHHQYATWAVRKGLKYTPRIDEFTFAHQFHPQ 292 R++ AK AA AL+D+AVIP H Q A WA++ GLKY R DE++ A FH Q Sbjct: 479 AREDNAKAAAKFALDDHAVIPSHSQLAMWAMKTGLKYEARTDEWSLAQFFHKQ 531 >gb|EGW60984.1| extracellular solute-binding protein family 5 [Dechlorosoma suillum PS] Length = 520 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 175/289 (60%), Positives = 221/289 (76%) Query: 4 GEVDAIDSVPPADVPKLKTNPKFSLVQRTSWRTIFWTLDQSRDKTPDITDKSGKPLDKNP 63 G+VD I+ VP ADV +LK + +F L QR SWRT+F LD RD +P +TD +GKPL KNP Sbjct: 232 GQVDMIEGVPGADVARLKKDARFRLEQRVSWRTLFLQLDLFRDASPFVTDLAGKPLAKNP 291 Query: 64 LKDIRVRQAISKAINRQALTERTLEGLGTPASNIVAPGILGYADNLKVEKYDPEGAKKLL 123 LKD++VRQA+S++INR+AL RTL+GLG PAS +VAPGI G+ E YDPEGAK+LL Sbjct: 292 LKDLKVRQALSRSINREALAARTLDGLGVPASRLVAPGIPGHGQQPAAEPYDPEGAKRLL 351 Query: 124 AAAGYPNGFALTLHGPNNRYINDERVVQTVAQFLSRIGIQTKVETFPLSVYFGKARNGDF 183 A AGYP GFALTLHGPNNRY+NDE+++QT+AQF RIG++TKVET PL+ YFG+ R+ DF Sbjct: 352 AEAGYPQGFALTLHGPNNRYLNDEQILQTLAQFFGRIGVKTKVETLPLAAYFGRLRHADF 411 Query: 184 SVALLGWGTLAGDFGLRTLVGTTDASTGWGSWNWGKYSNPQVDKLVQSSLGSVDEKQRQE 243 S ALLGWG+L+GDF LRTL+GT D +GWG+WNWG++S+ +VD ++S+L S D +R Sbjct: 412 SAALLGWGSLSGDFALRTLLGTPDEKSGWGAWNWGRFSDTRVDADIRSALASTDPARRSR 471 Query: 244 FAKQAATVALNDYAVIPLHHQYATWAVRKGLKYTPRIDEFTFAHQFHPQ 292 A+ A A+ VIPLHHQ ATWA+R GL Y RIDEFTFA Q P+ Sbjct: 472 AAEAAMDQAMQQLPVIPLHHQVATWALRAGLTYPARIDEFTFAAQVRPR 520