BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0133.p (156 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06690079.1| branched-chain amino acid ABC superfamily ATP... 146 1e-33 ref|YP_001416261.1| ABC transporter-like protein [Xanthobacter a... 143 7e-33 ref|ZP_06896930.1| ABC superfamily ATP binding cassette transpor... 143 1e-32 ref|YP_004416757.1| ABC transporter protein [Pusillimonas sp. T7... 138 3e-31 ref|YP_003694830.1| ABC transporter [Starkeya novella DSM 506] >... 137 6e-31 >ref|ZP_06690079.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gb|EFF73036.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 218 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 78/185 (42%), Positives = 106/185 (57%), Gaps = 37/185 (20%) Query: 5 LLQTSGLQLAFGGLVVADNINFELHPGERLAVIGQNGAGKTX------------------ 46 +L S + + G + ++N + + ++G+NGAGKT Sbjct: 1 MLNLSAINVDLAGNRILRDVNASFESSKTIGIVGRNGAGKTTLLRTIMGLTKIKSGKIAF 60 Query: 47 -------------------YAPEDRVMFPTFTVEENLRLPCDVLGLPTAEVDRRLEKALT 87 YAPEDRV+FPT TV ENL LPC+V G +++ R++ L Sbjct: 61 DGADLTAMPGHKRAALKVGYAPEDRVIFPTMTVAENLNLPCEVQGQSKSDIAARIQTVLK 120 Query: 88 VVPQLKEMLPRSGAALSGGQGKIAALGRALMAGTRLVLLDEPFQGLAPVLATQYGESLRR 147 VVPQL+ ML RSG+ALSGGQGK+ AL RA+M GTRL++LDEPFQGLAP LA Y E+L R Sbjct: 121 VVPQLEPMLGRSGSALSGGQGKMVALARAIMVGTRLLMLDEPFQGLAPKLARDYTEALGR 180 Query: 148 LREIE 152 L+E++ Sbjct: 181 LKELQ 185 >ref|YP_001416261.1| ABC transporter-like protein [Xanthobacter autotrophicus Py2] gb|ABS66604.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 225 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 81/184 (44%), Positives = 106/184 (57%), Gaps = 36/184 (19%) Query: 5 LLQTSGLQLAFGGLVVADNINFELHPGERLAVIGQNGAGKTX------------------ 46 +L + ++FG + V ++F+L GE +A +G+NGAGKT Sbjct: 1 MLILDHVTVSFGTVPVLRGVSFQLREGEAVAFVGRNGAGKTTTLRSIMGFTRNGGRIEFD 60 Query: 47 ------------------YAPEDRVMFPTFTVEENLRLPCDVLGLPTAEVDRRLEKALTV 88 YAPEDR +F FTVEEN+ LP V L + E RRL++ V Sbjct: 61 GHDLAGVAAHLRPGLGIGYAPEDRRLFSRFTVEENILLPAQVAKLSSEETKRRLDRVYHV 120 Query: 89 VPQLKEMLPRSGAALSGGQGKIAALGRALMAGTRLVLLDEPFQGLAPVLATQYGESLRRL 148 +P+LKEM R ++SGGQGK+ ALGRALM TRLVLLDEPFQGLAPVLA +Y E+LR L Sbjct: 121 LPELKEMARRPAGSVSGGQGKMVALGRALMLATRLVLLDEPFQGLAPVLANRYAEALRSL 180 Query: 149 REIE 152 R+ + Sbjct: 181 RDTD 184 >ref|ZP_06896930.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] gb|EFH11364.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] Length = 218 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/183 (44%), Positives = 106/183 (57%), Gaps = 37/183 (20%) Query: 5 LLQTSGLQLAFGGLVVADNINFELHPGERLAVIGQNGAGKTX------------------ 46 +L+ G+ + G V ++ + G R+A+IG+NGAGKT Sbjct: 1 MLRLEGVSVDIAGASVLRGVSLVVPAGGRVALIGRNGAGKTTTLRALMGLLPLRGGRIAV 60 Query: 47 -------------------YAPEDRVMFPTFTVEENLRLPCDVLGLPTAEVDRRLEKALT 87 YAPE+R +F +FTV+ENL LP +VLGLP AE+ RRLE Sbjct: 61 DGQDCAAIPAHHRTRLGLGYAPEERRLFGSFTVQENLLLPAEVLGLPRAELQRRLEAVYA 120 Query: 88 VVPQLKEMLPRSGAALSGGQGKIAALGRALMAGTRLVLLDEPFQGLAPVLATQYGESLRR 147 ++P+L+ PR A LSGGQGK+ ALGRALM G+R VLLDEPFQGLAP LA +Y E+L R Sbjct: 121 LLPELRGFAPRKAAGLSGGQGKMVALGRALMVGSRAVLLDEPFQGLAPALALRYAEALAR 180 Query: 148 LRE 150 LRE Sbjct: 181 LRE 183 >ref|YP_004416757.1| ABC transporter protein [Pusillimonas sp. T7-7] gb|AEC20133.1| ABC transporter protein [Pusillimonas sp. T7-7] Length = 221 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 77/185 (41%), Positives = 103/185 (55%), Gaps = 37/185 (20%) Query: 5 LLQTSGLQLAFGGLVVADNINFELHPGERLAVIGQNGAGKTX------------------ 46 +L+ + + + G + +IN G + ++G+NGAGKT Sbjct: 1 MLKLTDVNVDLAGNRILRDINCNFVAGTTVGIVGRNGAGKTTLLRSIMGLVKLRSGEILL 60 Query: 47 -------------------YAPEDRVMFPTFTVEENLRLPCDVLGLPTAEVDRRLEKALT 87 Y+PEDRV+FPT +VEENLRLPC L +++RLE Sbjct: 61 DEVNLSALPGHARAAHQIGYSPEDRVIFPTMSVEENLRLPCATLKQSKQAIEQRLEVVTE 120 Query: 88 VVPQLKEMLPRSGAALSGGQGKIAALGRALMAGTRLVLLDEPFQGLAPVLATQYGESLRR 147 VP LK ML RSG+ALSGGQGK+ ALGRALM GTRL+LLDEP+QGLAP L Y ++L R Sbjct: 121 AVPDLKPMLKRSGSALSGGQGKMVALGRALMVGTRLLLLDEPYQGLAPKLGLIYTQALGR 180 Query: 148 LREIE 152 L+ ++ Sbjct: 181 LKTMQ 185 >ref|YP_003694830.1| ABC transporter [Starkeya novella DSM 506] gb|ADH90211.1| ABC transporter related protein [Starkeya novella DSM 506] Length = 226 Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 80/185 (43%), Positives = 108/185 (58%), Gaps = 37/185 (20%) Query: 5 LLQTSGLQLAFGGLVVADNINFELHPGERLAVIGQNGAGKTX------------------ 46 +L+ G+ G+ V + + ++ G +A+IG+NGAGKT Sbjct: 1 MLRLEGVWAEIDGVTVVRDASLDVPAGATVALIGRNGAGKTSLLRLIMGALKLRSGQIHF 60 Query: 47 -------------------YAPEDRVMFPTFTVEENLRLPCDVLGLPTAEVDRRLEKALT 87 YAPE+R + +FT+EENLR P +V+ L AE+ RRL+ Sbjct: 61 DGHDLADLPLHHRPSIGIGYAPENRRLNGSFTLEENLRFPGEVIRLSPAELSRRLDLVYA 120 Query: 88 VVPQLKEMLPRSGAALSGGQGKIAALGRALMAGTRLVLLDEPFQGLAPVLATQYGESLRR 147 V+P+L++M R A LSGGQGK+ ALGRAL+AGTRLVLLDEPFQGLAPVLA +YG +LR Sbjct: 121 VLPELRDMRERPAAGLSGGQGKMVALGRALVAGTRLVLLDEPFQGLAPVLAQRYGAALRG 180 Query: 148 LREIE 152 LRE + Sbjct: 181 LREFD 185