BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0129.p (392 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06690075.1| ABC superfamily ATP binding cassette transpor... 255 9e-66 ref|YP_001416257.1| extracellular ligand-binding receptor [Xanth... 240 2e-61 ref|YP_004416753.1| extracellular ligand-binding receptor [Pusil... 236 6e-60 ref|ZP_01035722.1| ABC-type transport system periplasmic substra... 235 8e-60 ref|ZP_06896934.1| ABC superfamily ATP binding cassette transpor... 204 1e-50 >ref|ZP_06690075.1| ABC superfamily ATP binding cassette transporter periplasmic substrate-binding protein [Achromobacter piechaudii ATCC 43553] gb|EFF73032.1| ABC superfamily ATP binding cassette transporter periplasmic substrate-binding protein [Achromobacter piechaudii ATCC 43553] Length = 434 Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 120/164 (73%), Positives = 143/164 (87%), Gaps = 1/164 (0%) Query: 144 MRDIARRVGINGVKVVPTFVDEGVGGDKLLSEYRRVVQEQGVKVMLGSISSGSCNIVAPV 203 ++DI GI+GVK+VP+++DEG GG+KLLSEYRR+ E G +VML +ISSG CNIVAPV Sbjct: 58 IQDINAAGGIDGVKLVPSYIDEGGGGEKLLSEYRRLA-EGGTRVMLSAISSGHCNIVAPV 116 Query: 204 AEDLKVLNILWDCGTEKVLEERRYRYVVRTQANATTEMVASVLYLLRQKPNFKTIAVVNQ 263 AEDLKVLN+LWDCGTEK LE ++Y+YVVRTQANATTEMVA VLYL++ KP+FKTIA+VNQ Sbjct: 117 AEDLKVLNVLWDCGTEKALEGKKYKYVVRTQANATTEMVAQVLYLMKVKPDFKTIAIVNQ 176 Query: 264 DYAWGRDSWELFSHTLKMLKPDVKVVAELFPKFGASDFSTEISR 307 DYAWGRDS ++F LK KPDVKVVAE+FPKFGA+DFSTEISR Sbjct: 177 DYAWGRDSRDIFLAALKKFKPDVKVVAEMFPKFGAADFSTEISR 220 >ref|YP_001416257.1| extracellular ligand-binding receptor [Xanthobacter autotrophicus Py2] gb|ABS66600.1| Extracellular ligand-binding receptor [Xanthobacter autotrophicus Py2] Length = 432 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 112/175 (64%), Positives = 137/175 (78%) Query: 146 DIARRVGINGVKVVPTFVDEGVGGDKLLSEYRRVVQEQGVKVMLGSISSGSCNIVAPVAE 205 DI + G+ GV V FVDEG G + L++EYRR+V++ V VM SISSG CN +AP+AE Sbjct: 58 DINAKGGVQGVPVKLFFVDEGAGIETLMTEYRRLVEDTKVDVMFASISSGVCNKIAPLAE 117 Query: 206 DLKVLNILWDCGTEKVLEERRYRYVVRTQANATTEMVASVLYLLRQKPNFKTIAVVNQDY 265 DLKVLN +WDCGT+++LEE +Y YV RTQANAT E++A +LYLL+ KP+FKTIAVVNQDY Sbjct: 118 DLKVLNFMWDCGTQRILEEDKYNYVFRTQANATPEVLAPLLYLLKTKPDFKTIAVVNQDY 177 Query: 266 AWGRDSWELFSHTLKMLKPDVKVVAELFPKFGASDFSTEISRXARRARRSLLSAS 320 AWGRDSW +FS LK+LKPDVKVVAE FPKFGA+DFSTE+SR +LS S Sbjct: 178 AWGRDSWAIFSQALKVLKPDVKVVAEFFPKFGAADFSTEVSRLLALKPDVILSTS 232 >ref|YP_004416753.1| extracellular ligand-binding receptor [Pusillimonas sp. T7-7] gb|AEC20129.1| extracellular ligand-binding receptor [Pusillimonas sp. T7-7] Length = 433 Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 114/175 (65%), Positives = 137/175 (78%), Gaps = 1/175 (0%) Query: 146 DIARRVGINGVKVVPTFVDEGVGGDKLLSEYRRVVQEQGVKVMLGSISSGSCNIVAPVAE 205 D+ + GI GV V T++DEG G +KLLSEYRR+ E G KVML +ISSG C IVAPVAE Sbjct: 61 DLNAKGGIGGVPVKVTYIDEGGGSEKLLSEYRRLA-EGGTKVMLSAISSGHCGIVAPVAE 119 Query: 206 DLKVLNILWDCGTEKVLEERRYRYVVRTQANATTEMVASVLYLLRQKPNFKTIAVVNQDY 265 DLK+LNILWDCGT+ LEE+ +YVVRT+ANATTEMVA V+YL++ P+FKT+A+VNQDY Sbjct: 120 DLKILNILWDCGTQNALEEKELKYVVRTEANATTEMVAQVIYLMKMHPDFKTLAIVNQDY 179 Query: 266 AWGRDSWELFSHTLKMLKPDVKVVAELFPKFGASDFSTEISRXARRARRSLLSAS 320 AWGRDS ++F LK KPDVKVVAE+FPKFGA+DFSTEISR +LS S Sbjct: 180 AWGRDSRDIFLAALKKFKPDVKVVAEMFPKFGAADFSTEISRLQALRPDVILSTS 234 >ref|ZP_01035722.1| ABC-type transport system periplasmic substrate-binding protein (probable substrates branched-chain/neutral amino acids [Roseovarius sp. 217] gb|EAQ25887.1| ABC-type transport system periplasmic substrate-binding protein (probable substrates branched-chain/neutral amino acids [Roseovarius sp. 217] Length = 433 Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 108/177 (61%), Positives = 137/177 (77%) Query: 144 MRDIARRVGINGVKVVPTFVDEGVGGDKLLSEYRRVVQEQGVKVMLGSISSGSCNIVAPV 203 + +I GINGV V +F+DEG G + L SEYRR+V+ G +VML +ISSG+C +AP+ Sbjct: 58 IENINAAGGINGVPVDISFIDEGAGAEALTSEYRRMVESGGAEVMLAAISSGNCQTLAPL 117 Query: 204 AEDLKVLNILWDCGTEKVLEERRYRYVVRTQANATTEMVASVLYLLRQKPNFKTIAVVNQ 263 AEDL+V N++WDCGT+++ EE Y+YV RTQANAT EM+A+VLYLL+ KP+FKTIAVVNQ Sbjct: 118 AEDLQVPNLMWDCGTQRIFEENDYKYVFRTQANATPEMLATVLYLLKTKPDFKTIAVVNQ 177 Query: 264 DYAWGRDSWELFSHTLKMLKPDVKVVAELFPKFGASDFSTEISRXARRARRSLLSAS 320 DYAWGRDSW++F LK +KPDV+VVAE FPKFG+ DFSTEISR +LS S Sbjct: 178 DYAWGRDSWDIFITALKAMKPDVEVVAEFFPKFGSPDFSTEISRLQAMQPDVILSTS 234 >ref|ZP_06896934.1| ABC superfamily ATP binding cassette transporter, ligand-binding protein [Roseomonas cervicalis ATCC 49957] gb|EFH11368.1| ABC superfamily ATP binding cassette transporter, ligand-binding protein [Roseomonas cervicalis ATCC 49957] Length = 432 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 88/156 (56%), Positives = 120/156 (76%) Query: 152 GINGVKVVPTFVDEGVGGDKLLSEYRRVVQEQGVKVMLGSISSGSCNIVAPVAEDLKVLN 211 GI GV++ P FVDEG G D + EYRR+VQ + V ++ ISS C AP+A++L+ Sbjct: 64 GIGGVRIRPVFVDEGPGVDHFVGEYRRLVQSENVAIIFAGISSADCLACAPLADELRRPT 123 Query: 212 ILWDCGTEKVLEERRYRYVVRTQANATTEMVASVLYLLRQKPNFKTIAVVNQDYAWGRDS 271 +LWDCGT+++ E+ RY Y RTQANAT E++AS+LYLL+ KP+F+++AVVNQDYAWGRDS Sbjct: 124 LLWDCGTQRIFEDGRYDYAYRTQANATPEVLASLLYLLKTKPDFRSLAVVNQDYAWGRDS 183 Query: 272 WELFSHTLKMLKPDVKVVAELFPKFGASDFSTEISR 307 W++F L LKP V++ AELFP+FGA+DFSTE++R Sbjct: 184 WDIFRTALNTLKPGVRIAAELFPRFGATDFSTEVTR 219