BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0128.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776199.1| citrate lyase beta subunit [Herbaspirillum s... 295 6e-78 ref|YP_001117805.1| HpcH/HpaI aldolase [Burkholderia vietnamiens... 206 2e-51 ref|YP_001629458.1| putative citrate lyase beta chain [Bordetell... 202 3e-50 ref|ZP_05359787.1| citrate lyase subunit beta [Acinetobacter rad... 198 7e-49 ref|YP_001861087.1| HpcH/HpaI aldolase [Burkholderia phymatum ST... 197 9e-49 >ref|YP_003776199.1| citrate lyase beta subunit [Herbaspirillum seropedicae SmR1] gb|ADJ64291.1| citrate lyase beta subunit protein [Herbaspirillum seropedicae SmR1] Length = 277 Score = 295 bits (754), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 154/253 (60%), Positives = 184/253 (72%), Gaps = 9/253 (3%) Query: 1 VDLEDAVAPAAKTQARDTLADWLTQQANQQSNQPANQQDKLWVRINAADTQWYDDDVRCF 60 VDLEDAVA K AR+TLA WL Q S Q +LWVRINAADT W++ D+ F Sbjct: 30 VDLEDAVARPYKEAARETLARWLAGPEGQAS------QARLWVRINAADTVWHEQDLLTF 83 Query: 61 ANAPIAGIVLPKADDCDAIRNIARHFVGPRSHTRLLPLIETAVGIAQMRDIARARHVERL 120 + P+AGIVLPKA+D + +A RS + L+ LIE+A G+A MR IA A V+RL Sbjct: 84 SALPVAGIVLPKAEDAAGVGAVAGAL---RSGSGLIALIESAAGLAAMRQIAAAPGVQRL 140 Query: 121 VFGSIDLQVDLGIQCEPQESELTHLRVEMVIASRLANIAQPVDGVTTTFDDLPFLEHAVS 180 FGSID Q+DLG+QC P+E EL LRVEMV+ASRLA IA PVDGVT FDD L V Sbjct: 141 AFGSIDAQLDLGMQCGPEEEELLSLRVEMVLASRLAGIAAPVDGVTAGFDDEALLVRGVE 200 Query: 181 RARRIGFGAKLCIHPRQVDIVNQGFLPSAEEIAWARAVMAAVAQSDGGAISLNGKMIDKP 240 RARR+GFGAKLCIHPRQV++V +GFLPS +E+AWA VMAAV SDGGAISL G+MID+P Sbjct: 201 RARRLGFGAKLCIHPRQVEVVRRGFLPSEQELAWAAEVMAAVRASDGGAISLKGRMIDRP 260 Query: 241 VIMQAEKFLRQIG 253 +I+QAEKFLRQ+G Sbjct: 261 LILQAEKFLRQVG 273 >ref|YP_001117805.1| HpcH/HpaI aldolase [Burkholderia vietnamiensis G4] gb|ABO58340.1| HpcH/HpaI aldolase [Burkholderia vietnamiensis G4] Length = 286 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 114/250 (45%), Positives = 149/250 (59%), Gaps = 18/250 (7%) Query: 1 VDLEDAVAPAAKTQARDTLADWLTQQANQQSNQPANQQDKLWVRINAADTQWYDDDVRCF 60 +DLEDAV AK QARD + WL + + +VR NA T WY DD+ Sbjct: 30 LDLEDAVPSTAKAQARDAVVSWL------------GKGGRAYVRANAVGTAWYQDDIAAL 77 Query: 61 ANAP-IAGIVLPKADDCDAIRNIARHFVGPRSHTRLLPLIETAVGIAQMRDIARARHVER 119 P + GIV+PKA+ D + N+A LLPLIETAV +R +A+A V R Sbjct: 78 RTCPSLQGIVVPKAERADLLSNLANEI---SDEAVLLPLIETAVAFDDLRSLAKAPKVAR 134 Query: 120 LVFGSIDLQVDLGIQCEPQESELTHLRVEMVIASRLANIAQPVDGVTTTFDDLPFLEHAV 179 LVFG++D QVD GIQ + EL + R ++ IASR+A IA PVDGVT DD + Sbjct: 135 LVFGTLDFQVDTGIQGD--GDELVYFRSQLTIASRIAGIAAPVDGVTAAIDDAQRIRSDT 192 Query: 180 SRARRIGFGAKLCIHPRQVDIVNQGFLPSAEEIAWARAVMAAVAQSDGGAISLNGKMIDK 239 RAR +GF KLCIHP+Q++ V+ P EE+AWAR V+AAV +SDG AIS++GKM+D Sbjct: 193 VRARNLGFRGKLCIHPKQIEHVHAALRPCPEELAWARRVLAAVQESDGSAISVDGKMVDA 252 Query: 240 PVIMQAEKFL 249 PVI +A + Sbjct: 253 PVIAKANDIV 262 >ref|YP_001629458.1| putative citrate lyase beta chain [Bordetella petrii DSM 12804] emb|CAP41187.1| putative Citrate lyase beta chain [Bordetella petrii] Length = 274 Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 116/255 (45%), Positives = 161/255 (63%), Gaps = 17/255 (6%) Query: 1 VDLEDAVAPAAKTQARDTLADWLTQQANQQSNQPANQQDKLWVRINAADTQWYDDDVRCF 60 +DLEDAV P AKT AR +A+WL +PA +RIN A T W+DDD+R Sbjct: 31 LDLEDAVLPDAKTAARQAVAEWLAT-----PGRPAI------LRINGAGTPWFDDDLRAA 79 Query: 61 ANAPIAGIVLPKADDCDAIRNIARHFVGPRSHTRLLPLIETAVGIAQMRDIARARHVERL 120 A ++LPK++D + ++ +H + RL PL+ETA+G + R++A A V RL Sbjct: 80 RQAGCRAVMLPKSEDPAVLAHLRQHL---GAEARLFPLVETALGAHRARELALAPGVARL 136 Query: 121 VFGSIDLQVDLGIQCEPQESELTHLRVEMVIASRLANIAQPVDGVTTTFDDLPFLEHAVS 180 VFGS+D D GIQ E+ +RVE+V+ASRLA +A P+DG T +DD ++ + Sbjct: 137 VFGSVDFARDTGIQ---DEAGWLPVRVELVLASRLAGLAPPIDGTTLHWDDTAAVQAVAA 193 Query: 181 RARRIGFGAKLCIHPRQVDIVNQGFLPSAEEIAWARAVMAAVAQSDGGAISLNGKMIDKP 240 ARR+GFG +LCIHPRQV+ VNQGFLPS EE+ WAR V+ AVA GAI+++GK++DKP Sbjct: 194 AARRLGFGGQLCIHPRQVEPVNQGFLPSREELDWARRVVQAVAGGGRGAIAVDGKLVDKP 253 Query: 241 VIMQAEKFLRQIGET 255 + A +L Q G+ Sbjct: 254 LHDLALAWLAQAGQA 268 >ref|ZP_05359787.1| citrate lyase subunit beta [Acinetobacter radioresistens SK82] ref|ZP_06071937.1| citrate (Pro-3S)-lyase, beta subunit [Acinetobacter radioresistens SH164] gb|EET83730.1| citrate lyase subunit beta [Acinetobacter radioresistens SK82] gb|EEY87977.1| citrate (Pro-3S)-lyase, beta subunit [Acinetobacter radioresistens SH164] Length = 273 Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 106/256 (41%), Positives = 153/256 (59%), Gaps = 23/256 (8%) Query: 1 VDLEDAVAPAAKTQARDTLADWLTQQANQQSNQPANQQDKLWVRINAADTQWYDDDVRCF 60 +DLEDAV K AR+TL WL + Q + +RIN+ +++W+ DD++ Sbjct: 35 IDLEDAVPVNLKNSARETLKYWLMEHP----------QKNMMIRINSKNSEWFADDIQLA 84 Query: 61 ANAPIAGIVLPKAD---DCDAIRNIARHFVGPRSHTRLLPLIETAVGIAQMRDIARARHV 117 + + IVLPK + D DA+ I + LIET +G +R IA+A+ V Sbjct: 85 KFSNVQAIVLPKTESVADIDAVTAI--------RAMDIFALIETPLGFVNIRQIAQAKSV 136 Query: 118 ERLVFGSIDLQVDLGIQCEPQESELTHLRVEMVIASRLANIAQPVDGVTTTFDDLPFLEH 177 + L+FGSID Q+++ +Q +E L R E V+AS+LA I P+DGVT F D +E Sbjct: 137 KALIFGSIDFQLEMNMQGGYEE--LLSFRNEFVLASKLAGIESPIDGVTVDFKDEALVEK 194 Query: 178 AVSRARRIGFGAKLCIHPRQVDIVNQGFLPSAEEIAWARAVMAAVAQSDGGAISLNGKMI 237 +A+ +GF KLCIHP+Q+DIVN F P+ EI WA+ V+ A+ Q+ G AISL+GKMI Sbjct: 195 ETLQAKNLGFAGKLCIHPKQIDIVNTAFSPTDVEIQWAQRVLDAINQAQGQAISLDGKMI 254 Query: 238 DKPVIMQAEKFLRQIG 253 D PVI++A+K L+Q G Sbjct: 255 DLPVILRAQKILKQAG 270 >ref|YP_001861087.1| HpcH/HpaI aldolase [Burkholderia phymatum STM815] gb|ACC74041.1| HpcH/HpaI aldolase [Burkholderia phymatum STM815] Length = 269 Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 110/256 (42%), Positives = 148/256 (57%), Gaps = 18/256 (7%) Query: 1 VDLEDAVAPAAKTQARDTLADWLTQQANQQSNQPANQQDKLWVRINAADTQWYDDDVRCF 60 +DLEDAVA K +ARDT+ WL N + +VRINA T+WY +DV Sbjct: 30 LDLEDAVATDLKVEARDTVTSWL------------NAGGRAYVRINARGTEWYQNDVTNL 77 Query: 61 ANAP-IAGIVLPKADDCDAIRNIARHFVGPRSHTRLLPLIETAVGIAQMRDIARARHVER 119 P + GIV+PKA++ A+ I++ +LPLIE+A G A ++ IA VER Sbjct: 78 MKCPGLLGIVVPKAEESAALVKISKEL---SDEAVILPLIESARGFANLQQIACTPRVER 134 Query: 120 LVFGSIDLQVDLGIQCEPQESELTHLRVEMVIASRLANIAQPVDGVTTTFDDLPFLEHAV 179 LVFG++D QVD GI+ + E L + R ++ + SRLA IA PVDGVT + DD L Sbjct: 135 LVFGTLDFQVDTGIRGDGDE--LVYFRSQLTLVSRLAGIAAPVDGVTASLDDGDLLRQET 192 Query: 180 SRARRIGFGAKLCIHPRQVDIVNQGFLPSAEEIAWARAVMAAVAQSDGGAISLNGKMIDK 239 RAR +GF KLCIHP+QV V+ F PS EE+ WA V+ AV S G ++GKM+D Sbjct: 193 LRARNLGFRGKLCIHPKQVPHVHAAFQPSTEEVDWANRVLTAVNVSKGAVTVVDGKMVDV 252 Query: 240 PVIMQAEKFLRQIGET 255 PV+++A G T Sbjct: 253 PVVLKARDIFESAGIT 268