BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0126.p (337 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776200.1| acyl-CoA transferases/carnitine dehydratase ... 582 e-164 ref|YP_004688430.1| L-carnitine dehydratase/bile acid-inducible ... 521 e-146 ref|YP_004415220.1| hypothetical protein PT7_0056 [Pusillimonas ... 513 e-143 ref|YP_003166900.1| L-carnitine dehydratase/bile acid-inducible ... 510 e-142 ref|ZP_03697173.1| L-carnitine dehydratase/bile acid-inducible p... 508 e-142 >ref|YP_003776200.1| acyl-CoA transferases/carnitine dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ64292.1| acyl-CoA transferases/carnitine dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 399 Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust. Identities = 284/340 (83%), Positives = 311/340 (91%), Gaps = 3/340 (0%) Query: 1 MMPSTRPLEGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARGYDERVNGLSS 60 M PS RPLEGITV+SLEHAIAAPFCTRQLAD+GARVIK+ERPGVGDFARGYD RVNGLSS Sbjct: 1 MSPSHRPLEGITVISLEHAIAAPFCTRQLADLGARVIKIERPGVGDFARGYDSRVNGLSS 60 Query: 61 HFVWTNRSKESLTLNLKDADGKAIIDKLLDEADVLVQNLAPGAAAGLGLSAAVLHRKNPH 120 HFVWTNRSKESLTLNLKD +G+ IID+LL +ADVLVQNLAPGAAAGLGLSA LH ++P Sbjct: 61 HFVWTNRSKESLTLNLKDEEGRRIIDQLLQQADVLVQNLAPGAAAGLGLSAQALHARHPR 120 Query: 121 LIVCDISGYGENGPYRDKKAYDLLIQSEAGFLSVTGTADEQAKAGCSIADIAAGMYAYSH 180 LIVCDISGYGE+GPYRDKKAYDLLIQSEAGFLSVTGT D+ KAGCSIADIAAGMYAYS+ Sbjct: 121 LIVCDISGYGEDGPYRDKKAYDLLIQSEAGFLSVTGTPDDVVKAGCSIADIAAGMYAYSN 180 Query: 181 ILAALIK---RGRDGEGSHIDLSMLESLTEWMSFPMYYAYQGASAPLRSGAEHATIYPYG 237 ILAALIK GR+G GSHIDLSMLESL EWMSFP+YYAYQGASAPLRSGAEHATIYPYG Sbjct: 181 ILAALIKRGREGREGRGSHIDLSMLESLAEWMSFPLYYAYQGASAPLRSGAEHATIYPYG 240 Query: 238 PFTAGDGKVVMLGLQNEREWKVFCESVLQDPALAQDARFSTNSRRHENRAELRKLILDMF 297 PF+AGDGK VMLGLQNEREWKVFCE VLQD ALA DARFS+N+RRHE+R LR+LILD+F Sbjct: 241 PFSAGDGKTVMLGLQNEREWKVFCEQVLQDAALASDARFSSNARRHEHRDVLRQLILDVF 300 Query: 298 TPLTAQEVVARLDQAQIANASVNTMQDLWEHPQLAARERW 337 L+A++V ARLD+AQIANA VNTMQ+LW+HPQLAAR+RW Sbjct: 301 AGLSAEQVAARLDEAQIANARVNTMQELWQHPQLAARQRW 340 >ref|YP_004688430.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus necator N-1] gb|AEI82392.1| L-carnitine dehydratase/bile acid-inducible protein F [Cupriavidus necator N-1] Length = 392 Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust. Identities = 239/332 (71%), Positives = 287/332 (86%) Query: 6 RPLEGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARGYDERVNGLSSHFVWT 65 RPL+GITVVSLEHAIAAPFC+RQLAD+GARVIK+ERP VGDFARGYDERV+G+SSHF WT Sbjct: 2 RPLDGITVVSLEHAIAAPFCSRQLADLGARVIKIERPKVGDFARGYDERVDGMSSHFAWT 61 Query: 66 NRSKESLTLNLKDADGKAIIDKLLDEADVLVQNLAPGAAAGLGLSAAVLHRKNPHLIVCD 125 NRSKESL L+LK A+ AI+ K+LD+ADVL+QNLAPGAA LGLS L ++ P +IVCD Sbjct: 62 NRSKESLALDLKHAEAPAILQKILDQADVLIQNLAPGAADRLGLSYEALSQRYPGIIVCD 121 Query: 126 ISGYGENGPYRDKKAYDLLIQSEAGFLSVTGTADEQAKAGCSIADIAAGMYAYSHILAAL 185 ISGYG +GPYRDKKAYDLLIQ+E+GF+S+TGT D +KAGCSIADIAAGMYAY++ILAAL Sbjct: 122 ISGYGNDGPYRDKKAYDLLIQAESGFVSITGTPDTPSKAGCSIADIAAGMYAYTNILAAL 181 Query: 186 IKRGRDGEGSHIDLSMLESLTEWMSFPMYYAYQGASAPLRSGAEHATIYPYGPFTAGDGK 245 ++RG+ G+G+HID+SMLES+ EWMSFPMYYA+ GA P R+GA HATI+PYGPFTAGDGK Sbjct: 182 LQRGKTGKGAHIDVSMLESMAEWMSFPMYYAFDGAGPPPRAGASHATIFPYGPFTAGDGK 241 Query: 246 VVMLGLQNEREWKVFCESVLQDPALAQDARFSTNSRRHENRAELRKLILDMFTPLTAQEV 305 ++LGLQNEREW+ FC VL+ P LA+D RF NS R +NR ELR+LI++ F+PLT ++V Sbjct: 242 TIILGLQNEREWEAFCRVVLERPELAKDERFVANSLRSQNRDELRRLIIESFSPLTIEQV 301 Query: 306 VARLDQAQIANASVNTMQDLWEHPQLAARERW 337 V RL++AQIANA VN MQD+W HPQL ARERW Sbjct: 302 VERLERAQIANARVNEMQDVWNHPQLKARERW 333 >ref|YP_004415220.1| hypothetical protein PT7_0056 [Pusillimonas sp. T7-7] gb|AEC18596.1| hypothetical protein PT7_0056 [Pusillimonas sp. T7-7] Length = 408 Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust. Identities = 245/334 (73%), Positives = 275/334 (82%) Query: 4 STRPLEGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARGYDERVNGLSSHFV 63 + RPL+GITV+SLEHAIAAPFCTRQLADMGARVIKVERPGVGDFAR YDERV GL+SHFV Sbjct: 16 AVRPLDGITVISLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARKYDERVKGLASHFV 75 Query: 64 WTNRSKESLTLNLKDADGKAIIDKLLDEADVLVQNLAPGAAAGLGLSAAVLHRKNPHLIV 123 WTNRSKESLTL+LK D I+D+LL++ADVLVQNLAPGAAA LGLS LH KNP LIV Sbjct: 76 WTNRSKESLTLDLKHPDAAGILDQLLEQADVLVQNLAPGAAARLGLSFEALHEKNPRLIV 135 Query: 124 CDISGYGENGPYRDKKAYDLLIQSEAGFLSVTGTADEQAKAGCSIADIAAGMYAYSHILA 183 CDISGYGE GPY+DKKAYDLLIQSE+GFLSVTG AKAGCSI+DIAAGMYAYS IL+ Sbjct: 136 CDISGYGEGGPYQDKKAYDLLIQSESGFLSVTGDPQSPAKAGCSISDIAAGMYAYSSILS 195 Query: 184 ALIKRGRDGEGSHIDLSMLESLTEWMSFPMYYAYQGASAPLRSGAEHATIYPYGPFTAGD 243 AL+ RGR G GS ID+SMLES EWMSFP+YYA+ GA P R+GA HATIYPYGPF GD Sbjct: 196 ALLLRGRTGVGSRIDVSMLESTVEWMSFPLYYAFDGAEPPPRAGASHATIYPYGPFPVGD 255 Query: 244 GKVVMLGLQNEREWKVFCESVLQDPALAQDARFSTNSRRHENRAELRKLILDMFTPLTAQ 303 G VMLGLQNEREW FC +VLQ P LA D RF++NS R N+ LR LI+ F L+ + Sbjct: 256 GSEVMLGLQNEREWAAFCTTVLQQPELASDDRFNSNSLRVANKETLRVLIVTAFALLSRK 315 Query: 304 EVVARLDQAQIANASVNTMQDLWEHPQLAARERW 337 +V+ RL+ A IANASVNTM D+W HPQLAAR+RW Sbjct: 316 QVIERLEAAGIANASVNTMHDVWAHPQLAARQRW 349 >ref|YP_003166900.1| L-carnitine dehydratase/bile acid-inducible protein F [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV34971.1| L-carnitine dehydratase/bile acid-inducible protein F [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 392 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 240/332 (72%), Positives = 282/332 (84%) Query: 6 RPLEGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARGYDERVNGLSSHFVWT 65 RPL+GITVV+LEHAIAAPFCTRQLAD+GARVIKVERP GDFAR YDERV GL+SHFVWT Sbjct: 2 RPLDGITVVTLEHAIAAPFCTRQLADLGARVIKVERPVTGDFARAYDERVRGLASHFVWT 61 Query: 66 NRSKESLTLNLKDADGKAIIDKLLDEADVLVQNLAPGAAAGLGLSAAVLHRKNPHLIVCD 125 NRSKESLTL++K A+ I+ +LL++ADVLVQNLAPGAAA LGLS VL ++P LIVCD Sbjct: 62 NRSKESLTLDVKHAEAAGILARLLEQADVLVQNLAPGAAARLGLSYEVLREQHPRLIVCD 121 Query: 126 ISGYGENGPYRDKKAYDLLIQSEAGFLSVTGTADEQAKAGCSIADIAAGMYAYSHILAAL 185 ISGYG +GPYRDKKAYDLLIQSE+GFLS+TG+ D AKAGCSIADIAAGMYAYS+ILAAL Sbjct: 122 ISGYGASGPYRDKKAYDLLIQSESGFLSITGSPDAPAKAGCSIADIAAGMYAYSNILAAL 181 Query: 186 IKRGRDGEGSHIDLSMLESLTEWMSFPMYYAYQGASAPLRSGAEHATIYPYGPFTAGDGK 245 ++RGR G G HI++SMLES+ EWMS+P+YYA+ GA+ P R+GA HATI PYGPFTAGDGK Sbjct: 182 LQRGRSGRGCHIEVSMLESMVEWMSYPLYYAFDGATPPPRAGAAHATITPYGPFTAGDGK 241 Query: 246 VVMLGLQNEREWKVFCESVLQDPALAQDARFSTNSRRHENRAELRKLILDMFTPLTAQEV 305 VMLGLQNEREW+VFC +VL+ P LA D RFS++SRR NR EL LI+ F L+++++ Sbjct: 242 TVMLGLQNEREWEVFCRAVLERPELAADPRFSSSSRRTANRQELEALIVASFASLSSEQL 301 Query: 306 VARLDQAQIANASVNTMQDLWEHPQLAARERW 337 + RLD AQIANA +N M D+WEHPQL AR RW Sbjct: 302 IGRLDAAQIANARMNDMHDVWEHPQLRARGRW 333 >ref|ZP_03697173.1| L-carnitine dehydratase/bile acid-inducible protein F [Lutiella nitroferrum 2002] gb|EEG09659.1| L-carnitine dehydratase/bile acid-inducible protein F [Lutiella nitroferrum 2002] Length = 392 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 238/332 (71%), Positives = 282/332 (84%) Query: 6 RPLEGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARGYDERVNGLSSHFVWT 65 RPLEGITVV+LEHAIAAPFCTRQLAD+GARVIK+ERP VGDFAR YDERV GL+SHFVW+ Sbjct: 2 RPLEGITVVTLEHAIAAPFCTRQLADLGARVIKIERPRVGDFARAYDERVRGLASHFVWS 61 Query: 66 NRSKESLTLNLKDADGKAIIDKLLDEADVLVQNLAPGAAAGLGLSAAVLHRKNPHLIVCD 125 NRSKESLTL++K + + ++ KLL++ADVLVQNLAPGAAA LGLS L K+P LIVCD Sbjct: 62 NRSKESLTLDVKHPEAQKLLGKLLEQADVLVQNLAPGAAARLGLSYEALCDKHPGLIVCD 121 Query: 126 ISGYGENGPYRDKKAYDLLIQSEAGFLSVTGTADEQAKAGCSIADIAAGMYAYSHILAAL 185 ISGYG +GPYRDKKAYDLLIQSE+GFLS+TG+ DE AKAGCSIADI+AGMYAY++ILAAL Sbjct: 122 ISGYGADGPYRDKKAYDLLIQSESGFLSITGSPDEPAKAGCSIADISAGMYAYTNILAAL 181 Query: 186 IKRGRDGEGSHIDLSMLESLTEWMSFPMYYAYQGASAPLRSGAEHATIYPYGPFTAGDGK 245 ++R R +G ID+SMLES+ EWMS+P+YYA+ GA+ P R+GA HATIYPYGPF AGDGK Sbjct: 182 LQRARTQKGCQIDVSMLESMVEWMSYPLYYAFDGATPPPRAGAAHATIYPYGPFQAGDGK 241 Query: 246 VVMLGLQNEREWKVFCESVLQDPALAQDARFSTNSRRHENRAELRKLILDMFTPLTAQEV 305 VMLGLQNEREW FC+ VL P LA D RFS+NS+R R ELR LI+D+F+ LTA +V Sbjct: 242 TVMLGLQNEREWGTFCDKVLDKPELAHDPRFSSNSKRVAARNELRALIIDVFSGLTADQV 301 Query: 306 VARLDQAQIANASVNTMQDLWEHPQLAARERW 337 +A+LD AQIANA +N M D+W+HPQL AR+RW Sbjct: 302 IAKLDNAQIANAHMNDMHDVWQHPQLKARQRW 333