BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0090.p (243 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775208.1| branched-chain amino acid ABC transporter AT... 458 e-127 ref|ZP_08273443.1| Branched-chain amino acid transport ATP-bindi... 431 e-119 ref|YP_004752463.1| putative ABC transporter [Collimonas fungivo... 429 e-118 ref|YP_001155142.1| ABC transporter related [Polynucleobacter ne... 411 e-113 ref|YP_983736.1| ABC transporter-like protein [Polaromonas napht... 392 e-107 >ref|YP_003775208.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63300.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 242 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 228/243 (93%), Positives = 236/243 (97%), Gaps = 1/243 (0%) Query: 1 MLTISNLQAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGTVTL 60 MLTISNL AAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGG VTL Sbjct: 1 MLTISNLHAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGEVTL 60 Query: 61 GGKDVTGQDSHKIARAGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 GGK++TG DSHKIAR GLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER Sbjct: 61 GGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAVTPRAVMLNPEVILLDEPSMGLAPILVEEVFR 180 ALELFPRLKERQ+QLAGTLSGGEQQMLA+ RAVMLNPEVILLDEPSMGLAPILV+EVFR Sbjct: 121 ALELFPRLKERQSQLAGTLSGGEQQMLAMA-RAVMLNPEVILLDEPSMGLAPILVDEVFR 179 Query: 181 IILRLKEQGITMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVQAAYLGGG 240 II+RLKEQG+TMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAV+AAYLGGG Sbjct: 180 IIVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVKAAYLGGG 239 Query: 241 AAH 243 A H Sbjct: 240 AHH 242 >ref|ZP_08273443.1| Branched-chain amino acid transport ATP-binding protein livF [Oxalobacteraceae bacterium IMCC9480] gb|EGF33106.1| Branched-chain amino acid transport ATP-binding protein livF [Oxalobacteraceae bacterium IMCC9480] Length = 242 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 213/243 (87%), Positives = 229/243 (94%), Gaps = 1/243 (0%) Query: 1 MLTISNLQAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGTVTL 60 ML ISNL AAYGKVEVLHGIS+EVPKGKVVTLIGSNGAGKTTTMRAISGMIKPK G+V L Sbjct: 1 MLIISNLHAAYGKVEVLHGISLEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKSGSVML 60 Query: 61 GGKDVTGQDSHKIARAGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 GKDVTG +SH+IARAGLAHSPEGRRVF+TMS+TDNLLLGAFPR+T ARP+GDI DLE+ Sbjct: 61 AGKDVTGLESHRIARAGLAHSPEGRRVFSTMSITDNLLLGAFPRYTGARPRGDIKEDLEK 120 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAVTPRAVMLNPEVILLDEPSMGLAPILVEEVFR 180 ALELFPRLKERQ QLAGTLSGGEQQMLA+ RAVMLNPEVILLDEPSMGLAPILVEEVFR Sbjct: 121 ALELFPRLKERQHQLAGTLSGGEQQMLAMA-RAVMLNPEVILLDEPSMGLAPILVEEVFR 179 Query: 181 IILRLKEQGITMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVQAAYLGGG 240 IILRLKE+G+TMLLVEQFAAAALNVADYGYV+ENG+ISVHGPA+KL+NDPAVQAAYLGGG Sbjct: 180 IILRLKERGVTMLLVEQFAAAALNVADYGYVMENGRISVHGPANKLKNDPAVQAAYLGGG 239 Query: 241 AAH 243 H Sbjct: 240 QQH 242 >ref|YP_004752463.1| putative ABC transporter [Collimonas fungivorans Ter331] gb|AEK61640.1| putative ABC transporter [Collimonas fungivorans Ter331] Length = 262 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 213/240 (88%), Positives = 227/240 (94%), Gaps = 1/240 (0%) Query: 1 MLTISNLQAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGTVTL 60 ML+ISNL AAYGKVEVLHGIS+EVPKGKVVTLIGSNGAGKTTTMRAISGMIK K G+VTL Sbjct: 22 MLSISNLHAAYGKVEVLHGISLEVPKGKVVTLIGSNGAGKTTTMRAISGMIKAKAGSVTL 81 Query: 61 GGKDVTGQDSHKIARAGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 G DVTG SHKIARAGLAHSPEGRRVFATMSV DNLLLGAFPRFTR RP+GDI HDLE+ Sbjct: 82 AGVDVTGLASHKIARAGLAHSPEGRRVFATMSVVDNLLLGAFPRFTRLRPRGDIKHDLEQ 141 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAVTPRAVMLNPEVILLDEPSMGLAPILVEEVFR 180 ALELFPRLKER++QLAGTLSGGEQQMLA+ RA+MLNPEVILLDEPSMGLAPILVEEVFR Sbjct: 142 ALELFPRLKERRSQLAGTLSGGEQQMLAMA-RAIMLNPEVILLDEPSMGLAPILVEEVFR 200 Query: 181 IILRLKEQGITMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVQAAYLGGG 240 II RLKEQG+TMLLVEQFAAAALNVADYGYVLENG+ISVHGPA+KL+NDPAV+AAYLGGG Sbjct: 201 IISRLKEQGVTMLLVEQFAAAALNVADYGYVLENGRISVHGPAEKLKNDPAVKAAYLGGG 260 >ref|YP_001155142.1| ABC transporter related [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP33578.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 242 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 199/243 (81%), Positives = 222/243 (91%), Gaps = 1/243 (0%) Query: 1 MLTISNLQAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGTVTL 60 ML+I NL+A YGKV+VLHGIS++VPKG+V+TLIGSNGAGKTTTMRAI+GMIKP GG VTL Sbjct: 1 MLSIKNLEAGYGKVKVLHGISIDVPKGQVITLIGSNGAGKTTTMRAITGMIKPTGGEVTL 60 Query: 61 GGKDVTGQDSHKIARAGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 G+ + G DSHKIAR GLAHSPEGRRVF TMSVTDNLLLGAFPRFT +RPKGDI HDLE+ Sbjct: 61 SGEKINGYDSHKIARLGLAHSPEGRRVFTTMSVTDNLLLGAFPRFTGSRPKGDIKHDLEK 120 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAVTPRAVMLNPEVILLDEPSMGLAPILVEEVFR 180 ALE+FPRLKERQ QLAGTLSGGEQQMLA+ RAVMLNPE+ILLDEPSMGLAPILVEEVF+ Sbjct: 121 ALEMFPRLKERQYQLAGTLSGGEQQMLAMA-RAVMLNPEIILLDEPSMGLAPILVEEVFK 179 Query: 181 IILRLKEQGITMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVQAAYLGGG 240 II LK QG+TMLLVEQFAAAALNVADYGYVLENGKI+ HGPA KL++DPAV+AAYLGG Sbjct: 180 IISNLKSQGVTMLLVEQFAAAALNVADYGYVLENGKIATHGPASKLKDDPAVKAAYLGGA 239 Query: 241 AAH 243 ++H Sbjct: 240 SSH 242 >ref|YP_983736.1| ABC transporter-like protein [Polaromonas naphthalenivorans CJ2] gb|ABM38815.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family [Polaromonas naphthalenivorans CJ2] Length = 240 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 194/240 (80%), Positives = 216/240 (90%), Gaps = 1/240 (0%) Query: 1 MLTISNLQAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGTVTL 60 ML+I NL+A YGKV+VLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKP G + L Sbjct: 1 MLSIKNLEAGYGKVQVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPTAGQINL 60 Query: 61 GGKDVTGQDSHKIARAGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 GK + G +S+ IA+ GLAHSPEGRRVFATMSVTDNL+LGAFPR T +RPKGD+ DLER Sbjct: 61 HGKRIDGLESYTIAKQGLAHSPEGRRVFATMSVTDNLILGAFPRLTGSRPKGDVQGDLER 120 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAVTPRAVMLNPEVILLDEPSMGLAPILVEEVFR 180 A+ELFPRLKER+ QLAGTLSGGEQQMLA+ RAVMLNPE++LLDEPSMGLAPILVEEVFR Sbjct: 121 AMELFPRLKERRMQLAGTLSGGEQQMLAMA-RAVMLNPEIVLLDEPSMGLAPILVEEVFR 179 Query: 181 IILRLKEQGITMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVQAAYLGGG 240 II LK +G+TMLLVEQFAAAAL VADYGYVLENG+ISVHG ADKL++DPAV+AAYLGGG Sbjct: 180 IIADLKSRGVTMLLVEQFAAAALKVADYGYVLENGRISVHGEADKLRDDPAVRAAYLGGG 239