BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0083.p (260 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_366826.1| short chain dehydrogenase [Burkholderia sp. 383... 370 e-100 ref|YP_004387393.1| short-chain dehydrogenase/reductase SDR [Ali... 360 1e-97 ref|YP_004127582.1| short-chain dehydrogenase/reductase sdr [Ali... 359 2e-97 ref|NP_887154.1| short chain dehydrogenase [Bordetella bronchise... 353 2e-95 ref|NP_882724.1| short chain dehydrogenase [Bordetella parapertu... 336 2e-90 >ref|YP_366826.1| short chain dehydrogenase [Burkholderia sp. 383] gb|ABB06182.1| Short-chain dehydrogenase/reductase SDR [Burkholderia sp. 383] Length = 260 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/259 (70%), Positives = 213/259 (82%) Query: 1 MDLALTNKKILITGASQGIGEGLAHAFAQEGCAVYLTARSEEKLQGIAAALRSQYDVAAH 60 MD+ L +++LITGASQGIGEGLA AFA EGC V LTARS +KL+ +AA LR+ +DV Sbjct: 1 MDMKLARRRVLITGASQGIGEGLARAFAAEGCHVVLTARSADKLEQLAADLRAAHDVRVD 60 Query: 61 VLAADMTAPGAIECLCDFAGDADVLVNNAGAIEGGDLWEIDDARWRGSWELKVFGYINLT 120 VLA DMTAPGAI+ + FAGD DVLVNNAGAI GG LW++D+ WR WELKVFGYINLT Sbjct: 61 VLALDMTAPGAIDEVVAFAGDVDVLVNNAGAIPGGTLWDVDEEAWRKGWELKVFGYINLT 120 Query: 121 RALYGRMKTRKSGVILNNIGNGGENFDFNYIAGTTGNAALMAFTRAMGGKSLEDGIRVVG 180 RA+Y MK R GVILNNIGNGG+NFDFNYIAG+TGNAALMAFT A+GG+SLEDGIRVVG Sbjct: 121 RAIYTGMKARGGGVILNNIGNGGQNFDFNYIAGSTGNAALMAFTCALGGRSLEDGIRVVG 180 Query: 181 VNPGPVDTDRIRRVLKKRAGSRLGDENRYEELLKGYPLGRAAHVREIADMFVFLASERSG 240 VNPGPV T+RI +VL+ A LGDE R +EL+ GYPLGRAA V E+AD+FV+LAS RSG Sbjct: 181 VNPGPVGTERIAKVLRNHAARLLGDEARSDELMAGYPLGRAATVDEVADLFVYLASPRSG 240 Query: 241 YTSGNIITIDGGITSNRAI 259 YTSG I+T+DGGITS R++ Sbjct: 241 YTSGTIVTVDGGITSKRSV 259 >ref|YP_004387393.1| short-chain dehydrogenase/reductase SDR [Alicycliphilus denitrificans K601] gb|AEB83877.1| short-chain dehydrogenase/reductase SDR [Alicycliphilus denitrificans K601] Length = 260 Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 178/259 (68%), Positives = 209/259 (80%) Query: 1 MDLALTNKKILITGASQGIGEGLAHAFAQEGCAVYLTARSEEKLQGIAAALRSQYDVAAH 60 MD+ LT +++L+TGASQGIGEGLA AFA EGC + L ARS +KL+ +AA LR+ + V Sbjct: 1 MDMELTGRRVLVTGASQGIGEGLAKAFAAEGCHLALVARSADKLEALAAGLRAAHGVRVD 60 Query: 61 VLAADMTAPGAIECLCDFAGDADVLVNNAGAIEGGDLWEIDDARWRGSWELKVFGYINLT 120 VLA DMT GA+E + FAGDADVLVNNAGAI GG+LW++D WR WELKVFGYI+LT Sbjct: 61 VLALDMTQAGAVEEIMAFAGDADVLVNNAGAIPGGNLWDVDAQAWRKGWELKVFGYIDLT 120 Query: 121 RALYGRMKTRKSGVILNNIGNGGENFDFNYIAGTTGNAALMAFTRAMGGKSLEDGIRVVG 180 RALY RMK R GVILNNIGNGG+N DFNYIAG+TGNAALMAFT A+GG+SLEDGIRVVG Sbjct: 121 RALYPRMKARGGGVILNNIGNGGQNPDFNYIAGSTGNAALMAFTCALGGRSLEDGIRVVG 180 Query: 181 VNPGPVDTDRIRRVLKKRAGSRLGDENRYEELLKGYPLGRAAHVREIADMFVFLASERSG 240 VNPGPV T+RI +VLK A LGDE R EL+ GYPLGRAA V E+AD+FV+LAS RS Sbjct: 181 VNPGPVATERIAKVLKSHAARLLGDEARSGELMAGYPLGRAATVAEVADLFVYLASPRSS 240 Query: 241 YTSGNIITIDGGITSNRAI 259 YTSG I+T+DGGITS R++ Sbjct: 241 YTSGTIVTVDGGITSRRSV 259 >ref|YP_004127582.1| short-chain dehydrogenase/reductase sdr [Alicycliphilus denitrificans BC] gb|ADV00695.1| short-chain dehydrogenase/reductase SDR [Alicycliphilus denitrificans BC] Length = 260 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 177/259 (68%), Positives = 209/259 (80%) Query: 1 MDLALTNKKILITGASQGIGEGLAHAFAQEGCAVYLTARSEEKLQGIAAALRSQYDVAAH 60 MD+ LT +++L+TGASQGIGEGLA AFA EGC + L ARS +KL+ +AA LR+ + V Sbjct: 1 MDMELTGRRVLVTGASQGIGEGLAKAFAAEGCHLALVARSADKLEALAAGLRAAHGVRVD 60 Query: 61 VLAADMTAPGAIECLCDFAGDADVLVNNAGAIEGGDLWEIDDARWRGSWELKVFGYINLT 120 VLA DMT GA+E + FAGDADVLVNNAGAI GG+LW++D WR WELKVFGYI+LT Sbjct: 61 VLALDMTQAGAVEEIMAFAGDADVLVNNAGAIPGGNLWDVDAQAWRKGWELKVFGYIDLT 120 Query: 121 RALYGRMKTRKSGVILNNIGNGGENFDFNYIAGTTGNAALMAFTRAMGGKSLEDGIRVVG 180 RALY RMK R GVILNNIGNGG+N DFNYIAG+TGNAALMAFT A+GG+SLEDGIRVVG Sbjct: 121 RALYPRMKARGGGVILNNIGNGGQNPDFNYIAGSTGNAALMAFTCALGGRSLEDGIRVVG 180 Query: 181 VNPGPVDTDRIRRVLKKRAGSRLGDENRYEELLKGYPLGRAAHVREIADMFVFLASERSG 240 VNPGPV T+RI +VLK A LGDE R EL+ GYPLGRAA V E+AD+FV+LAS RS Sbjct: 181 VNPGPVATERIAKVLKSHAARLLGDEARSGELMAGYPLGRAATVAEVADLFVYLASPRSS 240 Query: 241 YTSGNIITIDGGITSNRAI 259 YTSG ++T+DGGITS R++ Sbjct: 241 YTSGTVVTVDGGITSRRSV 259 >ref|NP_887154.1| short chain dehydrogenase [Bordetella bronchiseptica RB50] emb|CAE31104.1| short chain dehydrogenase [Bordetella bronchiseptica RB50] Length = 260 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 170/259 (65%), Positives = 205/259 (79%) Query: 1 MDLALTNKKILITGASQGIGEGLAHAFAQEGCAVYLTARSEEKLQGIAAALRSQYDVAAH 60 MD+ + +++LITGASQGIG GLA AFA EGC + LTARS +KLQ +A LR ++ V Sbjct: 1 MDMKIAGQRVLITGASQGIGAGLAQAFAAEGCHLALTARSADKLQALAQDLRGRHGVQVD 60 Query: 61 VLAADMTAPGAIECLCDFAGDADVLVNNAGAIEGGDLWEIDDARWRGSWELKVFGYINLT 120 VL DMT PGA++ + FAGD DVLVNNAGAI GG+LW++D WR WELKVFGYI+L Sbjct: 61 VLPLDMTQPGAVDQVAAFAGDIDVLVNNAGAIPGGNLWDVDAPAWRQGWELKVFGYIDLA 120 Query: 121 RALYGRMKTRKSGVILNNIGNGGENFDFNYIAGTTGNAALMAFTRAMGGKSLEDGIRVVG 180 RA+Y RMK R GVILNNIGNGG+N DFNYIAG+TGNAALMAFT A+GG+SLEDGIRV+G Sbjct: 121 RAVYPRMKARGHGVILNNIGNGGQNPDFNYIAGSTGNAALMAFTCALGGRSLEDGIRVIG 180 Query: 181 VNPGPVDTDRIRRVLKKRAGSRLGDENRYEELLKGYPLGRAAHVREIADMFVFLASERSG 240 VNPGPV T+RI +VL+ A LGDE R +ELL GYPLGR A V E+AD+FV+LAS RS Sbjct: 181 VNPGPVATERIAKVLRSHAARLLGDEQRSDELLAGYPLGRTATVAEVADLFVYLASPRSA 240 Query: 241 YTSGNIITIDGGITSNRAI 259 YTSG I+T+DGGI+S R++ Sbjct: 241 YTSGTIVTVDGGISSKRSV 259 >ref|NP_882724.1| short chain dehydrogenase [Bordetella parapertussis 12822] emb|CAE35954.1| putative short chain dehydrogenase [Bordetella parapertussis] Length = 260 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 167/259 (64%), Positives = 197/259 (76%) Query: 1 MDLALTNKKILITGASQGIGEGLAHAFAQEGCAVYLTARSEEKLQGIAAALRSQYDVAAH 60 MD+ L K +LITGASQGIG GLAHAFA EGCA+ L ARS EKLQ + A L +++DV Sbjct: 1 MDMRLAGKSVLITGASQGIGAGLAHAFAGEGCALVLVARSHEKLQALRAELLARHDVGIE 60 Query: 61 VLAADMTAPGAIECLCDFAGDADVLVNNAGAIEGGDLWEIDDARWRGSWELKVFGYINLT 120 V A D+T ++E L G D+LVNNAG I GGDLW +D RWR WELKV GY+++T Sbjct: 61 VQAMDLTRLDSVEQLAASYGAVDILVNNAGGIPGGDLWSVDAQRWRAGWELKVMGYVDVT 120 Query: 121 RALYGRMKTRKSGVILNNIGNGGENFDFNYIAGTTGNAALMAFTRAMGGKSLEDGIRVVG 180 RA Y RM+ R GVILNNIG+GGEN+DF+YIAGT GNAALMAFTRA+GGKSL DGIRVVG Sbjct: 121 RAFYRRMRERGHGVILNNIGSGGENYDFDYIAGTAGNAALMAFTRALGGKSLRDGIRVVG 180 Query: 181 VNPGPVDTDRIRRVLKKRAGSRLGDENRYEELLKGYPLGRAAHVREIADMFVFLASERSG 240 VNPGPV T RI +++ RA GD RY ELL PLGRAA V+E+AD+FVFLAS RS Sbjct: 181 VNPGPVATARIETLMRGRARELYGDAERYTELLARLPLGRAASVQEVADLFVFLASPRSA 240 Query: 241 YTSGNIITIDGGITSNRAI 259 YTSG I+TIDGG+TSN++I Sbjct: 241 YTSGVIVTIDGGMTSNKSI 259