BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0079.p (692 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775391.1| phenylalanyl-tRNA synthetase beta chain prot... 587 e-165 ref|YP_004752162.1| phenylalanyl-tRNA synthetase subunit beta [C... 559 e-157 ref|YP_001353182.1| phenylalanyl-tRNA synthetase beta chain [Jan... 523 e-146 ref|YP_001100076.1| phenylalanyl-tRNA synthetase subunit beta [H... 521 e-145 ref|ZP_08274685.1| Phenylalanyl-tRNA synthetase beta chain [Oxal... 506 e-141 >ref|YP_003775391.1| phenylalanyl-tRNA synthetase beta chain protein [Herbaspirillum seropedicae SmR1] gb|ADJ63483.1| phenylalanyl-tRNA synthetase beta chain protein [Herbaspirillum seropedicae SmR1] Length = 808 Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust. Identities = 282/307 (91%), Positives = 295/307 (96%) Query: 137 QCVPCSARELKLSEDHGGLLELPDDAPVGQNFRDYFLLNDLKFTIKLTPNKADCLSVLGV 196 Q + CSARELKLSEDHGGLLELPDDAPVGQNFRDY LNDLKFTIKLTPNKADCLSVLGV Sbjct: 121 QGMLCSARELKLSEDHGGLLELPDDAPVGQNFRDYLQLNDLKFTIKLTPNKADCLSVLGV 180 Query: 197 AREVSALTDTPLKQPTFQTVAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK 256 AREVSALT TPLK PTFQ+ AVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK Sbjct: 181 AREVSALTGTPLKAPTFQSAAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK 240 Query: 257 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGKKGEQIKLLNGNTV 316 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWG+KGE +KLLNGNTV Sbjct: 241 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGRKGESLKLLNGNTV 300 Query: 317 EVDEWVGVIADDKELESLAGIMGGDATSVSLETTNIYLEAAFWFPQAIQGRARRYNFSTD 376 EVDEWVGVI+DDKELESLAGIMGGDAT+VSL+TTNIYLEAAFWFPQAIQGRARRYNFSTD Sbjct: 301 EVDEWVGVISDDKELESLAGIMGGDATAVSLDTTNIYLEAAFWFPQAIQGRARRYNFSTD 360 Query: 377 AAHRFERGVDFATVVEHIERITALLIEICGTPDTKVGPVDDQIVNLPKREPVKVRTARAT 436 AAHRFERGVDFATVV+HIERITALL+EICGT +T+VGPVDDQIVNLPKR PV++RTARA Sbjct: 361 AAHRFERGVDFATVVDHIERITALLLEICGTAETRVGPVDDQIVNLPKRAPVQLRTARAA 420 Query: 437 KVIGVAI 443 KVIGV I Sbjct: 421 KVIGVEI 427 >ref|YP_004752162.1| phenylalanyl-tRNA synthetase subunit beta [Collimonas fungivorans Ter331] gb|AEK61339.1| Phenylalanyl-tRNA synthetase beta chain [Collimonas fungivorans Ter331] Length = 808 Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust. Identities = 264/307 (85%), Positives = 288/307 (93%) Query: 137 QCVPCSARELKLSEDHGGLLELPDDAPVGQNFRDYFLLNDLKFTIKLTPNKADCLSVLGV 196 Q + CSARELKLSEDHGGLLELP+DAPVG+NFRDYF LNDLKFTIKLTPNKADCLSVLGV Sbjct: 121 QGMLCSARELKLSEDHGGLLELPEDAPVGKNFRDYFELNDLKFTIKLTPNKADCLSVLGV 180 Query: 197 AREVSALTDTPLKQPTFQTVAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK 256 AREVSALT TPLKQP F+TV+ N+ E LPV+ISAPDLCGRF+GRVIRGLNAKA TP+WMK Sbjct: 181 AREVSALTGTPLKQPVFKTVSANIAETLPVKISAPDLCGRFSGRVIRGLNAKATTPRWMK 240 Query: 257 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGKKGEQIKLLNGNTV 316 QRLERSGQRPISALVDISNYVMLELGRP+HVFDLDKIHG LDVRWGK GE +KLLNGNTV Sbjct: 241 QRLERSGQRPISALVDISNYVMLELGRPTHVFDLDKIHGGLDVRWGKAGESLKLLNGNTV 300 Query: 317 EVDEWVGVIADDKELESLAGIMGGDATSVSLETTNIYLEAAFWFPQAIQGRARRYNFSTD 376 VD+W+GVIADD+++ESLAGIMGGDAT+VSLET NIYLEAAFW+PQAIQGRARR+NFSTD Sbjct: 301 SVDDWIGVIADDRQIESLAGIMGGDATAVSLETQNIYLEAAFWWPQAIQGRARRFNFSTD 360 Query: 377 AAHRFERGVDFATVVEHIERITALLIEICGTPDTKVGPVDDQIVNLPKREPVKVRTARAT 436 A HRFERGVDFAT VEHIERITALL+EICGTP+T+VGPVDDQ VNLPKR+PVKVRTARA Sbjct: 361 AGHRFERGVDFATTVEHIERITALLVEICGTPETQVGPVDDQSVNLPKRDPVKVRTARAI 420 Query: 437 KVIGVAI 443 KVIGV + Sbjct: 421 KVIGVPL 427 >ref|YP_001353182.1| phenylalanyl-tRNA synthetase beta chain [Janthinobacterium sp. Marseille] gb|ABR88616.1| phenylalanyl-tRNA synthetase beta chain [Janthinobacterium sp. Marseille] Length = 809 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 248/308 (80%), Positives = 277/308 (89%), Gaps = 1/308 (0%) Query: 137 QCVPCSARELKLSEDHGGLLELPDDAPVGQNFRDYFLLNDLKFTIKLTPNKADCLSVLGV 196 Q + CSARELKLS++ GGL++LP DAPVGQNFRDY+ LNDLKFTIKLTPNKADCLSVLGV Sbjct: 121 QGMLCSARELKLSDEQGGLMDLPADAPVGQNFRDYYQLNDLKFTIKLTPNKADCLSVLGV 180 Query: 197 AREVSALTDTPLKQPTFQTVAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK 256 AREVSALT TPLK PTFQ VA + + LPV+ISAPDLCGRF+GR+IRGLNA+A TP WMK Sbjct: 181 AREVSALTGTPLKAPTFQPVAATITDVLPVKISAPDLCGRFSGRIIRGLNARAQTPDWMK 240 Query: 257 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGKKGEQIKLLNGNTV 316 QRLERSGQRPISALVDISNYVMLELGRP+HVFDL KI+G LDVRWGK GE +KLLNGNTV Sbjct: 241 QRLERSGQRPISALVDISNYVMLELGRPTHVFDLSKINGGLDVRWGKAGESLKLLNGNTV 300 Query: 317 EVDEWVGVIADDKELESLAGIMGGDATSVSLETTNIYLEAAFWFPQAIQGRARRYNFSTD 376 VDEWVGVIAD+KE+ESLAGIMGGDA++VSL+T +IYLEAAFW+P AIQGR RR+NFSTD Sbjct: 301 AVDEWVGVIADEKEIESLAGIMGGDASAVSLDTQDIYLEAAFWYPNAIQGRGRRFNFSTD 360 Query: 377 AAHRFERGVDFATVVEHIERITALLIEICGTPD-TKVGPVDDQIVNLPKREPVKVRTARA 435 AAHRFERGVDFAT VEH+ERITAL++EICG D TKVGP+DD +VNLPKRE V VRTARA Sbjct: 361 AAHRFERGVDFATTVEHMERITALIVEICGQKDLTKVGPIDDHVVNLPKREAVSVRTARA 420 Query: 436 TKVIGVAI 443 KVIGV + Sbjct: 421 VKVIGVPL 428 >ref|YP_001100076.1| phenylalanyl-tRNA synthetase subunit beta [Herminiimonas arsenicoxydans] emb|CAL61951.1| Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) [Herminiimonas arsenicoxydans] Length = 809 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 244/308 (79%), Positives = 278/308 (90%), Gaps = 1/308 (0%) Query: 137 QCVPCSARELKLSEDHGGLLELPDDAPVGQNFRDYFLLNDLKFTIKLTPNKADCLSVLGV 196 Q + CS +ELKLS++ GGL++LP DAP+GQNFRDY+ LNDLKFTIKLTPNKADCLSVLGV Sbjct: 121 QGMLCSVKELKLSDEQGGLMDLPSDAPIGQNFRDYYQLNDLKFTIKLTPNKADCLSVLGV 180 Query: 197 AREVSALTDTPLKQPTFQTVAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK 256 AREVSALT TPLK PT+Q VA + + LPV +SAPDLCGRF+GR+IRGLNA+A+TP WMK Sbjct: 181 AREVSALTGTPLKMPTYQAVAATIADVLPVTVSAPDLCGRFSGRIIRGLNARASTPDWMK 240 Query: 257 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGKKGEQIKLLNGNTV 316 QRLERSGQRPISALVDISNYVMLELGRP+HVFDLDKIHG L+VRWGKK E +KLLNGNTV Sbjct: 241 QRLERSGQRPISALVDISNYVMLELGRPTHVFDLDKIHGGLNVRWGKKDESLKLLNGNTV 300 Query: 317 EVDEWVGVIADDKELESLAGIMGGDATSVSLETTNIYLEAAFWFPQAIQGRARRYNFSTD 376 VDEW+GVIAD++++ESLAGIMGGDAT+VSL+T +IYLEAAFW+P AIQGRARR+NFSTD Sbjct: 301 AVDEWIGVIADEQQIESLAGIMGGDATAVSLDTQDIYLEAAFWYPNAIQGRARRFNFSTD 360 Query: 377 AAHRFERGVDFATVVEHIERITALLIEICGTPD-TKVGPVDDQIVNLPKREPVKVRTARA 435 AAHRFERGVDFAT VEHIERITAL++EICG D T VGP+DD IVNLPKR+PV VRTARA Sbjct: 361 AAHRFERGVDFATTVEHIERITALIVEICGQKDKTAVGPIDDHIVNLPKRDPVSVRTARA 420 Query: 436 TKVIGVAI 443 KVIGV + Sbjct: 421 VKVIGVPL 428 >ref|ZP_08274685.1| Phenylalanyl-tRNA synthetase beta chain [Oxalobacteraceae bacterium IMCC9480] gb|EGF31845.1| Phenylalanyl-tRNA synthetase beta chain [Oxalobacteraceae bacterium IMCC9480] Length = 809 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 245/345 (71%), Positives = 288/345 (83%), Gaps = 23/345 (6%) Query: 137 QCVPCSARELKLSEDHGGLLELPDDAPVGQNFRDYFLLNDLKFTIKLTPNKADCLSVLGV 196 Q + CSA+ELKLS+++ GL++LPDDAPVGQNFRDYF LNDLKFTIKLTPNKADCLS+LGV Sbjct: 121 QGMLCSAKELKLSDENSGLIDLPDDAPVGQNFRDYFQLNDLKFTIKLTPNKADCLSILGV 180 Query: 197 AREVSALTDTPLKQPTFQTVAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK 256 AREVSALT LK+PT+Q VAV + + LPV+ISAPDLCGRF+GR+IRGLNAKAATP+WMK Sbjct: 181 AREVSALTGCALKKPTYQPVAVTMADILPVKISAPDLCGRFSGRIIRGLNAKAATPEWMK 240 Query: 257 QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGKKGEQIKLLNGNTV 316 QRLERSGQR I+ALVDISNYVMLELG+P+HVFDL KIHG LDVRWG+ GE +KLLNGNTV Sbjct: 241 QRLERSGQRSIAALVDISNYVMLELGQPTHVFDLSKIHGGLDVRWGRVGEALKLLNGNTV 300 Query: 317 EVDEWVGVIADDKELESLAGIMGGDATSVSLETTNIYLEAAFWFPQAIQGRARRYNFSTD 376 VD+WVGVIAD++E+ESLAGIMGGDAT+V+L+T +IYLEAAFWFPQAIQGRARRYNFST+ Sbjct: 301 TVDDWVGVIADEQEIESLAGIMGGDATAVTLDTQDIYLEAAFWFPQAIQGRARRYNFSTE 360 Query: 377 AAHRFERGVDFATVVEHIERITALLIEICG-TPDTKVGPVDDQIVNLPKREPVKVRTARA 435 AAHRFERGVDFAT V+ IERITAL++EICG T T VGP+DDQ NLP R PV +RT+RA Sbjct: 361 AAHRFERGVDFATTVDSIERITALIVEICGQTGITMVGPIDDQTANLPSRLPVSLRTSRA 420 Query: 436 TKVIGVAIXRTARATKVIGVAKGGIHPVMRSWERVEEIFRSIGFD 480 +K+IGV + E++ EIF +GF+ Sbjct: 421 SKIIGVPF----------------------TDEQIAEIFSRLGFE 443