BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0063.p (312 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003049220.1| family 2 glycosyl transferase [Methylotenera... 195 7e-48 ref|YP_002137892.1| family glycosyltransferase [Geobacter bemidj... 183 3e-44 ref|ZP_08570164.1| glycosyl transferase [Rheinheimera sp. A13L] ... 182 8e-44 ref|YP_787145.1| capsular polysaccharide biosynthesis glycosyl t... 181 1e-43 ref|YP_003324508.1| glycosyl transferase family 2 [Thermobaculum... 178 1e-42 >ref|YP_003049220.1| family 2 glycosyl transferase [Methylotenera mobilis JLW8] gb|ACT48693.1| glycosyl transferase family 2 [Methylotenera mobilis JLW8] Length = 311 Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 164/297 (55%), Gaps = 14/297 (4%) Query: 5 IDISICICTFRRPELLDRLLAALTEQSHDALRMEVVVVDNDPAGSAAPVLRDWQAHFPMP 64 I +++C+CTFRRP L + L + + + D + M+VVV DNDP S P++ + +P Sbjct: 13 IRVTVCLCTFRRPALSNALQSLVNQIIPDGVTMDVVVADNDPHESGRPIVESYAKEGSLP 72 Query: 65 LHAVHENTPNIAKARNAAVHTAQGEWVLFIDDDEAPDPDWIRRLVAAQRRYDADAVFAPV 124 + V + P +A ARN +V A+GEW+ FIDDDE D DW++ L+ + A V PV Sbjct: 73 ITYVVAHEPGVASARNCSVANARGEWLAFIDDDEEADVDWVQALLKCAEAHQASVVIGPV 132 Query: 125 LPRYRDDTPAWIRSGDFFNRRRFATGTVITTKDARTGNVLIRRGKLMAVSAPDG-GPFDA 183 + Y + P+WI +GDFF +R A+GT + T T N L+R+ L PD PF Sbjct: 133 IACYPSEAPSWIVNGDFFGKRVPASGTQLGT--GATCNALVRKDAL-----PDQLCPFSL 185 Query: 184 AFGRTGAEDTMLFRDMLAHGARFVWCDEATVSEEVPAQRANLNWLLRRSYRLGQTYVLSE 243 F TG EDT +F M++ G R V C EA V+E V R N ++LLR++ R+G+TY Sbjct: 186 EFNTTGGEDTEMFSQMVSAGHRIVSCQEARVTETVEPHRLNEDFLLRKARRVGETY---- 241 Query: 244 IARLHGVQRFLRATQLGL-RALLQLLIAAGVALATLPFSRIMSIRWLRTTLAQCGKL 299 AR+ + + + + RA +Q L+A+ ++L P S+ + A GKL Sbjct: 242 -ARIFISPKGIALQTIDIVRACIQTLVASVISLMLHPLGMEKSMHYKIKAYANLGKL 297 >ref|YP_002137892.1| family glycosyltransferase [Geobacter bemidjiensis Bem] gb|ACH38096.1| glycosyltransferase, family 2 [Geobacter bemidjiensis Bem] Length = 305 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 113/308 (36%), Positives = 154/308 (50%), Gaps = 20/308 (6%) Query: 3 APIDISICICTFRRPELLDRLLAALTEQSHDA-LRMEVVVVDNDPAGSAAPVLRDWQAHF 61 +P+ I++CICTF+RPE+L RLL L Q D VVVDND SA + +Q + Sbjct: 4 SPMHITVCICTFKRPEMLQRLLITLEGQQTDGKFSYSAVVVDNDANRSALETIALFQKYH 63 Query: 62 PMPLHAVHENTPNIAKARNAAVHTAQGEWVLFIDDDEAPDPDWIRRLVAAQRRYDADAVF 121 +P+ + E NIA+ARN AV A G+++ FIDDDE P+ W+ ++V A V Sbjct: 64 TLPVTYLVEPEQNIARARNKAVDNATGDFIAFIDDDEFPENRWLLQMVNILEGSGAAGVL 123 Query: 122 APVLPRYRDDTPAWIRSGDFFNRRRFATGTVITTKDARTGNVLIRRGKLMAVSAPDGGPF 181 PV P + P WI +R+ ATGT++ + D RTGNVLI R + F Sbjct: 124 GPVRPHFEKGCPKWIIKSGLCDRKSHATGTIMRSADTRTGNVLISR----EIFKDTRNRF 179 Query: 182 DAAFGRTGAEDTMLFRDMLAHGARFVWCDEATVSEEVPAQRANLNWLLRRSYRLGQTYVL 241 D AFGR+G ED F ++ G F+W +EA V E VP +R + ++ LRR+ R G V Sbjct: 180 DPAFGRSGGEDVRFFEYVMQKGHTFLWSNEALVYETVPHERWSASFYLRRAVRKGG--VS 237 Query: 242 SEIARLHGVQRFLRATQLGLRALLQLLIAAGVALATLPFS----RIMSIRWLRTTLAQCG 297 + R G R L L A V TLPF+ + I+ L T Sbjct: 238 GSVIRKRG---------FSFRHLAFALAAFCVYATTLPFAVLAGKHFCIKCLVKTAYHLA 288 Query: 298 KLSALAGH 305 LS GH Sbjct: 289 WLSGFFGH 296 >ref|ZP_08570164.1| glycosyl transferase [Rheinheimera sp. A13L] gb|EGM78118.1| glycosyl transferase [Rheinheimera sp. A13L] Length = 298 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 108/305 (35%), Positives = 161/305 (52%), Gaps = 11/305 (3%) Query: 7 ISICICTFRRPELLDRLLAALTEQSHDALRMEVVVVDNDPAGSAAPVLRDWQAHFPMPLH 66 IS+ +CT++R L L + + + +EV+VVDND SA ++ + FP PL+ Sbjct: 3 ISVSMCTYKRQHLQHTLDSIALLVIPEGVSVEVLVVDNDELQSAKAIIDTVRRDFPHPLN 62 Query: 67 AVHENTPNIAKARNAAVHTAQGEWVLFIDDDEAPDPDWIRRLVAAQRRYDADAVFAPVLP 126 E NIA ARN + A+G+W+ IDDDE DP W+ L A Y AD VF V+P Sbjct: 63 YYSEPVKNIAAARNKLLEEARGDWIASIDDDEVADPLWLAALTATADHYSADVVFGQVIP 122 Query: 127 RYRDDTPAWIRSGDFFNRRRFATGTVITTKDARTGNVLIRRGKLMAVSAPDGGPFDAAFG 186 + D+TPAWI+ G++F+RR TGT +++ +G LI R L FD A+G Sbjct: 123 DFPDNTPAWIKEGNYFSRRTHKTGTEVSS--GGSGCTLINRLFLERHQL----KFDLAYG 176 Query: 187 RTGAEDTMLFRDMLAHGARFVWCDEATVSEEVPAQRANLNWLLRRSYRLGQTYVLSEIAR 246 TG ED LF M GA+ V+C EA V E V R ++L +R+ R+GQTY + + Sbjct: 177 TTGGEDVQLFYRMFRLGAKLVYCKEAIVHESVERNRLTSSYLKKRALRIGQTYARYRLEQ 236 Query: 247 LHGVQRFLRATQLGLRALLQLLIAAGVALATLPFSRIMSIRWLRTTLAQCGKL-SALAGH 305 Q+FL + +L L + V+L + P ++ + ++ L + GK+ S L G Sbjct: 237 ATARQKFL----FTAKNVLLLCGISIVSLFSYPLNKQLYLKSYLKALDKYGKVTSVLNGK 292 Query: 306 RYHEY 310 + Y Sbjct: 293 KVELY 297 >ref|YP_787145.1| capsular polysaccharide biosynthesis glycosyl transferase [Bordetella avium 197N] emb|CAJ50257.1| putative capsular polysaccharide biosynthesis glycosyl transferase [Bordetella avium 197N] Length = 310 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 116/315 (36%), Positives = 163/315 (51%), Gaps = 11/315 (3%) Query: 1 MSAP-IDISICICTFRRPELLDRLLAALTEQSHDALRMEVVVVDNDPAGSAAPVLRDWQA 59 M+AP +DI++C+ T+RR L L + ++VVVDND SA PV+ +A Sbjct: 1 MNAPALDITVCMATYRR--LPQLELLLADLAAQTLPPRQIVVVDNDAVASARPVVEAHRA 58 Query: 60 HFP---MPLHAVHENTPNIAKARNAAVHTAQGEWVLFIDDDEAPDPDWIRRLVAAQRRYD 116 + L + +I+ RN V A+ W+ FIDDDE P W+ L + R+ Sbjct: 59 ALQARGIALDYAVQPEKSISLTRNMTVQRARSAWLAFIDDDERAPPQWLALLSDSAHRFG 118 Query: 117 ADAVFAPVLPRYRDDTPAWIRSGDFFNRRRFATGTVITTKDARTGNVLIRRGKLMAVSAP 176 AD V APVLP PAW+R G F+ RF TGT + R GN L+ L + Sbjct: 119 ADGVLAPVLPVLPPHAPAWLRRGHFYEWVRFPTGTELPGNALRLGNALLSMACLNRLRP- 177 Query: 177 DGGPFDAAFGRTGAEDTMLFRDMLAHGARFVWCDEATVSEEVPAQRANLNWLLRRSYRLG 236 FD +G TG ED + + GAR +WCDEA V+E V +R ++WLLRR+ R G Sbjct: 178 ---LFDPVYGLTGGEDGDMLLRLRQTGARLIWCDEAAVTEPVTDERMRVDWLLRRALRGG 234 Query: 237 QTYVLSEI-ARLHGVQRFLRATQLGLRALLQLLIAAGVALATLPFSRIMSIRWLRTTLAQ 295 Q + L + +L+G +R RA+LQ+++A +AL P R ++ WL A Sbjct: 235 QDFALHFLRGKLNGPPGAVRILGFYGRAVLQMVMAGALALMLWPLGRHHAVHWLARAYAN 294 Query: 296 CGKLSALAGHRYHEY 310 GKLS L G R+HEY Sbjct: 295 YGKLSLLWGARHHEY 309 >ref|YP_003324508.1| glycosyl transferase family 2 [Thermobaculum terrenum ATCC BAA-798] gb|ACZ43685.1| glycosyl transferase family 2 [Thermobaculum terrenum ATCC BAA-798] Length = 328 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 110/318 (34%), Positives = 166/318 (52%), Gaps = 21/318 (6%) Query: 2 SAPIDISICICTFRRPELLDRLLAALTE---QSHDALRMEVVVVDNDPAGSAAPVLRDWQ 58 +A + +C+ T++RP+ L R L +L + + + VVDNDP+ SA P+++ Q Sbjct: 17 AAAATVGVCVITYKRPKGLHRCLQSLQLLQFRLSSTPHISIFVVDNDPSASAQPIVQQLQ 76 Query: 59 AHFPMPLHAVHENTPNIAKARNAAVHTAQG-EWVLFIDDDEAPDPDWIRRLVAAQRRYDA 117 P+ E I+ ARN AV A+ +++ FIDDDE DP W+ L+ QR ++A Sbjct: 77 TLSKWPITYDVEPIRGISYARNRAVSLAKDCDFIAFIDDDEYADPFWLDELLETQRLHNA 136 Query: 118 DAVFAPVLPRYRDDTPAWIRSGDFFNRRRFATGTVITTKDARTGNVLIRRGKLMAVSAPD 177 D V V+P + PAW+ G FF +R TG I + A T NVLIRR L V Sbjct: 137 DVVAGSVIPEFEGKPPAWVVDGGFFEKRWAKTGEEI--RSAHTANVLIRRQVLAGVE--- 191 Query: 178 GGPFDAAFGRTGAEDTMLFRDMLAHGARFVWCDEATVSEEVPAQRANLNWLLRRSYRLGQ 237 GPFD F TG DT+L + G++ VWC+ + V E +P R+N +W++RR+YR+G Sbjct: 192 -GPFDPRFALTGGSDTLLSLRLKRTGSKIVWCERSVVWESIPPSRSNFSWVIRRAYRIGN 250 Query: 238 TYVLSEIARLHGVQRFLRATQLG-----LRALLQLLIAAGVALATLPFSRIMSIRWLRTT 292 T V E A ++R +R+ +G LR L+L A + L ++ +I+ L Sbjct: 251 TRVRCEKALPPNLRRSMRSLVMGAGFTLLRESLKL------APSLLLQGKVRAIKRLTWM 304 Query: 293 LAQCGKLSALAGHRYHEY 310 C ++ G Y EY Sbjct: 305 ATACEIITGFLGIGYEEY 322