BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0059.p (299 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_787137.1| capsular polysaccharide export protein [Bordete... 205 6e-51 ref|YP_315553.1| polysaccharide export outer membrane protein [T... 194 2e-47 ref|YP_546134.1| polysaccharide export protein [Methylobacillus ... 193 3e-47 gb|EGP46775.1| capsular polysaccharide export protein [Achromoba... 190 2e-46 ref|YP_001352322.1| polysaccharide export outer membrane protein... 189 6e-46 >ref|YP_787137.1| capsular polysaccharide export protein [Bordetella avium 197N] emb|CAJ50249.1| putative capsular polysaccharide export protein [Bordetella avium 197N] Length = 364 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 113/244 (46%), Positives = 152/244 (62%), Gaps = 8/244 (3%) Query: 57 VGSGDVLRVTVFGQPDLSAEVGVNDKGFLTLPLIGGIDVNGLTTSEISAKVADGLRKGQY 116 VG GD L +T+ G V V+ +G + PLIG + V+GLT S I ++A LR Y Sbjct: 128 VGPGDTLNITILGPNGSETRVTVDAEGQIVAPLIGDLRVSGLTPSAIGKRIAQDLRNKGY 187 Query: 117 LKNPEVSVEVVQLRSQMVSVLGEVSRPGRYPIPGHMSVLELLATAGGLTAQADQTVTLLR 176 + +P+V+VEVV RS++VSVLG+V RPGRYPI G MSVLELLA AGG T A + TL+R Sbjct: 188 MTDPQVTVEVVAFRSRIVSVLGQVQRPGRYPIEGRMSVLELLAMAGGATDGAGEVATLVR 247 Query: 177 RKNDNNGSSAEIDVRIPILLGETSTTGRTPLDVELNAGDVVNVNKKKLFYIHGEVNRPGS 236 R + N R+ + + R D EL GDVV V + FY++GEV +PG+ Sbjct: 248 RADGGNE-------RLNLYVNNGQAPSRPLQDTELEPGDVVFVPEAPRFYVYGEVGKPGA 300 Query: 237 YPMEQDMNVMRAISLGGGMTQRASQRRIYINREMPEKGV-QEIKAKLTDPILPGDVVYVN 295 YP+E+ +NVMRA+S+ GG+T RAS RI I+R P G + + LTD + PGDV++VN Sbjct: 301 YPIEKGLNVMRALSVAGGLTPRASDSRIDIHRTDPLTGATTDKRVSLTDTVQPGDVIHVN 360 Query: 296 ESLF 299 E F Sbjct: 361 ERFF 364 >ref|YP_315553.1| polysaccharide export outer membrane protein [Thiobacillus denitrificans ATCC 25259] gb|AAZ97748.1| polysaccharide export outer membrane protein [Thiobacillus denitrificans ATCC 25259] Length = 264 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 109/260 (41%), Positives = 162/260 (62%), Gaps = 8/260 (3%) Query: 41 TLSTLALPS-STVTNTRVGSGDVLRVTVFGQPDLSAEVGVNDKGFLTLPLIGGIDVNGLT 99 L LA P+ S T+ R+G GDV+R+TV+GQPDL+ + V+ KG ++ PLIG + + G T Sbjct: 12 CLMLLAPPALSGDTDYRMGVGDVVRITVYGQPDLTTDARVSAKGNISFPLIGEVKLAGTT 71 Query: 100 TSEISAKVADGLRKGQYLKNPEVSVEVVQLRSQMVSVLGEVSRPGRYPIPGHMSVLELLA 159 +E ++A L KG ++ P V++ VVQ R Q VSVLG V+RPG+YP+ V + LA Sbjct: 72 PAEGEREIASRLSKGGFVVQPFVTLNVVQYRGQQVSVLGRVNRPGKYPLEKAGRVSDALA 131 Query: 160 TAGGLTAQADQTVTLLRRKNDNNGSSAEIDVRIPILLGETSTTGRTPLDVELNAGDVVNV 219 AGG+ +TL+R + D +IDV G P +V + GD++NV Sbjct: 132 LAGGILPDGADVITLVRER-DGKIEYRQIDVL------ALFNPGGDPNNVVVQDGDIINV 184 Query: 220 NKKKLFYIHGEVNRPGSYPMEQDMNVMRAISLGGGMTQRASQRRIYINREMPEKGVQEIK 279 ++ +FYI+GEV RPG++ +EQ+M +M+A+S+GGG+T R +QR I I R + V+E+ Sbjct: 185 ARQPMFYIYGEVQRPGAFRLEQNMTLMQALSMGGGLTPRGTQRGIRIMRRDDKGAVREVS 244 Query: 280 AKLTDPILPGDVVYVNESLF 299 +L D + P DV+YV ESLF Sbjct: 245 GELGDLVKPDDVIYVKESLF 264 >ref|YP_546134.1| polysaccharide export protein [Methylobacillus flagellatus KT] gb|ABE50293.1| polysaccharide export protein [Methylobacillus flagellatus KT] Length = 270 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 106/247 (42%), Positives = 154/247 (62%), Gaps = 7/247 (2%) Query: 53 TNTRVGSGDVLRVTVFGQPDLSAEVGVNDKGFLTLPLIGGIDVNGLTTSEISAKVADGLR 112 ++ +G GDVLR++VF QPDLS EV V++ G +T PLIG + V G T + K+A L Sbjct: 31 SDIVLGPGDVLRISVFEQPDLSLEVRVSESGTITYPLIGEVRVGGETPAAAERKIASMLE 90 Query: 113 KGQYLKNPEVSVEVVQLRSQMVSVLGEVSRPGRYPIPGHMSVLELLATAGGLTAQADQTV 172 G +LKNP V++ V QL+SQ VSVLG+V+RPGRYP+ S+ ++LA AGG+ + Sbjct: 91 SGGFLKNPHVNIIVAQLQSQQVSVLGQVNRPGRYPLDSAKSLADVLALAGGVAPDGGDLI 150 Query: 173 TLLRRKNDNNGSSAEIDVRIPILLGETSTTGRTPLDVELNAGDVVNVNKKKLFYIHGEVN 232 +L+R+ + VR I E G ++ L AGD++ V++ FYI+GEV Sbjct: 151 SLVRKIEGKS-------VREIIDFAEMMRDGDLNKNILLTAGDIIYVDRAPRFYIYGEVQ 203 Query: 233 RPGSYPMEQDMNVMRAISLGGGMTQRASQRRIYINREMPEKGVQEIKAKLTDPILPGDVV 292 RPG Y +E M V++A+++GGG++ R +++ I + R E GV+ IK K D I P DVV Sbjct: 204 RPGQYRLEYHMTVLQALAVGGGLSLRGTEKGIKVKRLDDEGGVKIIKVKHDDFIQPNDVV 263 Query: 293 YVNESLF 299 YV ES+F Sbjct: 264 YVQESVF 270 >gb|EGP46775.1| capsular polysaccharide export protein [Achromobacter xylosoxidans AXX-A] Length = 372 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 109/244 (44%), Positives = 154/244 (63%), Gaps = 8/244 (3%) Query: 57 VGSGDVLRVTVFGQPDLSAEVGVNDKGFLTLPLIGGIDVNGLTTSEISAKVADGLRKGQY 116 VG GD L + + G A V+ G + +P++G I +GLT + I ++ LR + Sbjct: 136 VGPGDTLNINILGTGGTQARATVDADGQIVVPMLGNIRASGLTPAAIGKRIEQDLRSKGF 195 Query: 117 LKNPEVSVEVVQLRSQMVSVLGEVSRPGRYPIPGHMSVLELLATAGGLTAQADQTVTLLR 176 + +P+V+VEVV LRS++VSVLG+V+RPGRYPI G +SVLELLA AGG T A TL+R Sbjct: 196 MTDPQVAVEVVTLRSRIVSVLGQVARPGRYPIEGKLSVLELLAMAGGATGGAGDVATLVR 255 Query: 177 RKNDNNGSSAEIDVRIPILLGETSTTGRTPLDVELNAGDVVNVNKKKLFYIHGEVNRPGS 236 R N RI + +G + ++ D EL GDVV V + FY++GEV +PG+ Sbjct: 256 RAGGGND-------RINLYVGNRQSPSQSLQDTELQPGDVVFVPEAPRFYVYGEVGKPGA 308 Query: 237 YPMEQDMNVMRAISLGGGMTQRASQRRIYINREMPEKG-VQEIKAKLTDPILPGDVVYVN 295 YP+EQ +NVMRA+++ GG+T RAS RI +NR G + + +AKLTD + PGDV++VN Sbjct: 309 YPLEQGLNVMRALAVAGGLTPRASDSRIDLNRTDALTGEITDRRAKLTDAVQPGDVIHVN 368 Query: 296 ESLF 299 E F Sbjct: 369 ERFF 372 >ref|YP_001352322.1| polysaccharide export outer membrane protein [Janthinobacterium sp. Marseille] gb|ABR89144.1| polysaccharide export outer membrane protein [Janthinobacterium sp. Marseille] Length = 262 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 102/250 (40%), Positives = 160/250 (64%), Gaps = 7/250 (2%) Query: 50 STVTNTRVGSGDVLRVTVFGQPDLSAEVGVNDKGFLTLPLIGGIDVNGLTTSEISAKVAD 109 +T + +G+GDV+++TVFG DL+ E V++ G ++ PL+G + V GL++++ K+AD Sbjct: 20 ATAADVPLGAGDVVKITVFGNNDLTVETRVSEAGSISFPLVGEVKVGGLSSNQAEKKIAD 79 Query: 110 GLRKGQYLKNPEVSVEVVQLRSQMVSVLGEVSRPGRYPIPGHMSVLELLATAGGLTAQAD 169 L KG +++NP+V++ V +++SQ VSVLG+V++PGRYP+ G S+ ++LA AGG +A Sbjct: 80 LLDKGGFIRNPQVNLMVTEMQSQQVSVLGQVNKPGRYPVDGKRSLTDVLAMAGGANEEAA 139 Query: 170 QTVTLLRRKNDNNGSSAEIDVRIPILLGETSTTGRTPLDVELNAGDVVNVNKKKLFYIHG 229 TV +L +D S ID L E +G + EL AGD V V + FYI+G Sbjct: 140 DTV-ILTHTSDGKTSKETID------LLELVRSGDPSKNRELVAGDQVFVERAPRFYIYG 192 Query: 230 EVNRPGSYPMEQDMNVMRAISLGGGMTQRASQRRIYINREMPEKGVQEIKAKLTDPILPG 289 EV +PGSY +E++M V++A+S GGG++ R ++R + I R +Q + K D + P Sbjct: 193 EVQKPGSYKLERNMMVLQALSTGGGLSPRGTERGVRIKRRDANGVLQIMTVKHDDLLKPD 252 Query: 290 DVVYVNESLF 299 D+VYV ESLF Sbjct: 253 DIVYVKESLF 262