BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0054.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776537.1| transcription regulator protein [Herbaspiril... 275 2e-72 ref|YP_004753779.1| Iron-sulfur cluster regulator IscR [Collimon... 244 2e-63 ref|YP_001100496.1| repressor of the iscRSUA operon, involved in... 238 3e-61 ref|YP_001352941.1| iron-sulfur cluster assembly transcription f... 238 3e-61 ref|ZP_08273676.1| Iron-sulfur cluster regulator IscR [Oxalobact... 236 1e-60 >ref|YP_003776537.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64629.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 164 Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 136/153 (88%), Positives = 138/153 (90%), Gaps = 3/153 (1%) Query: 1 MIDLALRHGNGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRGPGGGYNLARKAAD 60 MIDLALR G GPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRGPGGGYNLARKAAD Sbjct: 14 MIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRGPGGGYNLARKAAD 73 Query: 61 VSVADIIIAVDEPLDATQCGGKENCHSVTHPGGTRCMTHDLWSTLNEKMVEYLDSVSLQD 120 VSVADIIIAVDEPLDATQCGGKENCHS +HPGG RCMTHDLWSTLNEKMVEYLDSVSLQD Sbjct: 74 VSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNEKMVEYLDSVSLQD 133 Query: 121 LVNQQHTKEQKHPEHRTLGTEQSVVVMHRPHAA 153 LV+QQ KE K EHR QSVVVMHRP AA Sbjct: 134 LVDQQ--KEPKPAEHRA-ADSQSVVVMHRPQAA 163 >ref|YP_004753779.1| Iron-sulfur cluster regulator IscR [Collimonas fungivorans Ter331] gb|AEK62956.1| Iron-sulfur cluster regulator IscR [Collimonas fungivorans Ter331] Length = 164 Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 125/151 (82%), Positives = 132/151 (87%), Gaps = 3/151 (1%) Query: 1 MIDLALRHGNGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRGPGGGYNLARKAAD 60 MIDLALR G GPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRGPGGGYNLARKA D Sbjct: 14 MIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRGPGGGYNLARKAED 73 Query: 61 VSVADIIIAVDEPLDATQCGGKENCHSVTHPGGTRCMTHDLWSTLNEKMVEYLDSVSLQD 120 V+VADIIIAVDEPLDATQCGGKENCHS H GG+RCMTHDLWSTLN KMVEYLDSVSL+D Sbjct: 74 VTVADIIIAVDEPLDATQCGGKENCHSPDHEGGSRCMTHDLWSTLNAKMVEYLDSVSLKD 133 Query: 121 LVNQQHTKEQKHPEHRTLGTEQSVVVMHRPH 151 LV+QQH ++Q EQ+VVVMHR H Sbjct: 134 LVDQQHAQQQAQQRK---ALEQNVVVMHRSH 161 >ref|YP_001100496.1| repressor of the iscRSUA operon, involved in assembly of Fe-S clusters [Herminiimonas arsenicoxydans] emb|CAL62374.1| Iron-sulfur cluster assembly transcription factor IscR [Herminiimonas arsenicoxydans] Length = 157 Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 118/154 (76%), Positives = 129/154 (83%), Gaps = 10/154 (6%) Query: 1 MIDLALRHGNGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRGPGGGYNLARKAAD 60 MIDLALR NGPVTL+ IS+RQEISLSYLEQLFGKLRRH+IVESVRGPGGGYNLAR+A D Sbjct: 14 MIDLALRQDNGPVTLAGISQRQEISLSYLEQLFGKLRRHEIVESVRGPGGGYNLARRAED 73 Query: 61 VSVADIIIAVDEPLDATQCGGKENCHSVTHPGGTRCMTHDLWSTLNEKMVEYLDSVSLQD 120 V+VADIIIAVDEPLDATQCGGKENCHS H G RCMTHDLW+TLN KMV+YLDSVSL+D Sbjct: 74 VTVADIIIAVDEPLDATQCGGKENCHSPEHEHGGRCMTHDLWATLNAKMVDYLDSVSLKD 133 Query: 121 LVNQQHTKEQKHPEHRTLGTEQSVVVMHRPHAAV 154 LV+QQ K +EQ VVV+HR HAAV Sbjct: 134 LVDQQKQKV----------SEQCVVVVHRNHAAV 157 >ref|YP_001352941.1| iron-sulfur cluster assembly transcription factor [Janthinobacterium sp. Marseille] gb|ABR90077.1| iron-sulfur cluster assembly transcription factor [Janthinobacterium sp. Marseille] Length = 157 Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 118/154 (76%), Positives = 129/154 (83%), Gaps = 10/154 (6%) Query: 1 MIDLALRHGNGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRGPGGGYNLARKAAD 60 MIDLALR NGPVTL+ IS+RQEISLSYLEQLFGKLRRH+IVESVRGPGGGYNLAR+A D Sbjct: 14 MIDLALRQDNGPVTLAGISQRQEISLSYLEQLFGKLRRHEIVESVRGPGGGYNLARRAED 73 Query: 61 VSVADIIIAVDEPLDATQCGGKENCHSVTHPGGTRCMTHDLWSTLNEKMVEYLDSVSLQD 120 V+VADIIIAVDEPLDATQCGGKENCHS H G RCMTHDLW+TLN KMV+YLDSVSL+D Sbjct: 74 VTVADIIIAVDEPLDATQCGGKENCHSPEHEHGGRCMTHDLWATLNAKMVDYLDSVSLKD 133 Query: 121 LVNQQHTKEQKHPEHRTLGTEQSVVVMHRPHAAV 154 LV+QQ K +EQ VVV+HR HAAV Sbjct: 134 LVDQQKQKI----------SEQCVVVVHRNHAAV 157 >ref|ZP_08273676.1| Iron-sulfur cluster regulator IscR [Oxalobacteraceae bacterium IMCC9480] gb|EGF32848.1| Iron-sulfur cluster regulator IscR [Oxalobacteraceae bacterium IMCC9480] Length = 147 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 115/151 (76%), Positives = 124/151 (82%), Gaps = 10/151 (6%) Query: 1 MIDLALRHGNGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRGPGGGYNLARKAAD 60 MIDLALR GPVTLS IS+RQEISLSYLEQLFGKLRRH+IVESVRGPGGGYNLAR+A D Sbjct: 4 MIDLALRQSGGPVTLSGISQRQEISLSYLEQLFGKLRRHEIVESVRGPGGGYNLARRAED 63 Query: 61 VSVADIIIAVDEPLDATQCGGKENCHSVTHPGGTRCMTHDLWSTLNEKMVEYLDSVSLQD 120 V+VADIIIAVDEPLD+TQCGGKENC T GTRCMTHDLWSTLN KMVEYLDSVSL+D Sbjct: 64 VTVADIIIAVDEPLDSTQCGGKENCRKSTAENGTRCMTHDLWSTLNSKMVEYLDSVSLKD 123 Query: 121 LVNQQHTKEQKHPEHRTLGTEQSVVVMHRPH 151 LV+QQ K EQ+VVV+HR H Sbjct: 124 LVDQQRQK----------NIEQNVVVLHRSH 144