BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0047.p (193 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001893445.1| extracellular solute-binding protein family ... 202 3e-50 ref|YP_001863264.1| extracellular solute-binding protein [Burkho... 192 2e-47 ref|ZP_07674035.1| bacterial extracellular solute-binding protei... 191 4e-47 ref|YP_003778084.1| extracellular solute-binding, family 1 prote... 165 3e-39 ref|ZP_04853911.1| extracellular solute-binding protein, family ... 67 1e-09 >ref|YP_001893445.1| extracellular solute-binding protein family 1 [Ralstonia pickettii 12J] ref|YP_002983789.1| family 1 extracellular solute-binding protein [Ralstonia pickettii 12D] gb|ACD30018.1| extracellular solute-binding protein family 1 [Ralstonia pickettii 12J] gb|ACS65117.1| extracellular solute-binding protein family 1 [Ralstonia pickettii 12D] Length = 463 Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 98/162 (60%), Positives = 122/162 (75%), Gaps = 2/162 (1%) Query: 15 SPVSRLLTAFL-LCLLAACGQDAGNDAADQAPLVRTQITALVWAPDWPEEMHRIADAFHR 73 S +RLL+ + L +L+ C Q + P RT ITAL+WAPDWPE+M +IA F + Sbjct: 38 SHFARLLSGLIGLLVLSGCHQQDAPITSSPPPH-RTSITALIWAPDWPEQMLQIAAEFSK 96 Query: 74 AHPNISVDVQFMIGNSVEENLKPKVATHNLPDLVSVNPNAYSAELAEQGVLTDLGETVAW 133 +P++ VDVQFMIGNSVEEN+KP+VA LPDL+SVNPNAYSAELA+Q VL D+ +T AW Sbjct: 97 LNPDVQVDVQFMIGNSVEENIKPRVAAGTLPDLLSVNPNAYSAELADQRVLADVSQTSAW 156 Query: 134 NNMLESLKPDWTNRHGKRFGISGGVAATLIYYNKEMFKRAGI 175 NML LK DWT+R GK FGISGGVA T+IYYN+EMF++AGI Sbjct: 157 TNMLAPLKRDWTSRRGKGFGISGGVATTMIYYNREMFEKAGI 198 >ref|YP_001863264.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gb|ACC76218.1| extracellular solute-binding protein family 1 [Burkholderia phymatum STM815] Length = 412 Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 93/151 (61%), Positives = 117/151 (77%), Gaps = 9/151 (5%) Query: 48 RTQITALVWAPDWPEEMHRIADAFHRAHPNISVDVQFMIGNSVEENLKPKVATHNLPDLV 107 +T ITALVWAPDWPEEM +IA AF + +P+I V+VQFM+GNSVE N+KP++A+ NLPDLV Sbjct: 19 KTIITALVWAPDWPEEMLQIAAAFSKENPDIGVNVQFMVGNSVEANIKPRIASGNLPDLV 78 Query: 108 SVNPNAYSAELAEQGVLTDLGETVAWNNMLESLKPDWTN-RHGKRFGISGGVAATLIYYN 166 SVNPNAYSA+LA+QG+L ++G+T AWNNML+ LK DWT+ R K FGISGGVA L+YYN Sbjct: 79 SVNPNAYSADLADQGILAEVGKTAAWNNMLDPLKGDWTSRRQSKAFGISGGVATVLMYYN 138 Query: 167 KEMFKRAGIAAYYNK--------EMFKRAGI 189 ++MF++AGI A E KRAG Sbjct: 139 QDMFEKAGIKALPTNFREFLAICEQLKRAGF 169 >ref|ZP_07674035.1| bacterial extracellular solute-binding protein [Ralstonia sp. 5_7_47FAA] gb|EFP67466.1| bacterial extracellular solute-binding protein [Ralstonia sp. 5_7_47FAA] Length = 411 Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 91/148 (61%), Positives = 115/148 (77%), Gaps = 3/148 (2%) Query: 29 LAACGQ-DAGNDAADQAPLVRTQITALVWAPDWPEEMHRIADAFHRAHPNISVDVQFMIG 87 ++ C Q DA +A P RT ITAL+WAPDWPE+M +IA F + +P++ VDVQFMIG Sbjct: 1 MSGCQQQDAPITSA--PPPHRTSITALIWAPDWPEQMLQIAAEFSKLNPDVQVDVQFMIG 58 Query: 88 NSVEENLKPKVATHNLPDLVSVNPNAYSAELAEQGVLTDLGETVAWNNMLESLKPDWTNR 147 NSVEEN+KP+VA +PDL+SVNPNAYSAELAEQ +L ++ +T AW NML LK DWT+R Sbjct: 59 NSVEENIKPRVAAGTMPDLLSVNPNAYSAELAEQRILANVSQTSAWTNMLGPLKRDWTSR 118 Query: 148 HGKRFGISGGVAATLIYYNKEMFKRAGI 175 G FGISGGVA T+IYYN+EMF++AG+ Sbjct: 119 RGTGFGISGGVATTMIYYNREMFEKAGV 146 >ref|YP_003778084.1| extracellular solute-binding, family 1 protein [Herbaspirillum seropedicae SmR1] gb|ADJ66176.1| extracellular solute-binding, family 1 protein [Herbaspirillum seropedicae SmR1] Length = 473 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 72/127 (56%), Positives = 97/127 (76%) Query: 51 ITALVWAPDWPEEMHRIADAFHRAHPNISVDVQFMIGNSVEENLKPKVATHNLPDLVSVN 110 + ALVWAPDW EEM R+ D F HP + +++QFMIGNSVEENLKP+ T +LPD+VSVN Sbjct: 78 LNALVWAPDWAEEMQRVCDGFMHEHPGVRINLQFMIGNSVEENLKPRATTDSLPDIVSVN 137 Query: 111 PNAYSAELAEQGVLTDLGETVAWNNMLESLKPDWTNRHGKRFGISGGVAATLIYYNKEMF 170 + Y+A LA+QG+L DLG+T +W+ +L+ L+ +WT G RFG+ GVA TLIYY+ ++F Sbjct: 138 ASPYTASLADQGLLADLGQTRSWHGLLDILQREWTAPGGCRFGLPSGVATTLIYYHPDLF 197 Query: 171 KRAGIAA 177 +RAGI A Sbjct: 198 ERAGIQA 204 >ref|ZP_04853911.1| extracellular solute-binding protein, family 1 [Paenibacillus sp. oral taxon 786 str. D14] gb|EES72017.1| extracellular solute-binding protein, family 1 [Paenibacillus sp. oral taxon 786 str. D14] Length = 450 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 17/172 (9%) Query: 21 LTAFLLCLLAACGQD-AGNDAADQAPL---------VRTQITALVWAPDWP----EEMHR 66 LTA L L+ACG A N+AA P + IT PD + +H Sbjct: 15 LTAVLALSLSACGGGGAKNNAAANEPAGNGGKSGSGEKITITFQNIYPDPATPSYKTIHA 74 Query: 67 IADAFHRAHPNISVDVQFMIGNSVEENLKPKVATHNLPDLVSVNPNAYSAELAEQGVLTD 126 + + + AHPNI +++ + + + LK + A+ +PD+ VNP A + G+L Sbjct: 75 LVEEYEAAHPNIHIELDTLNTDQQKIKLKTQAASKEVPDITIVNPAAQMKPFVDAGLLAP 134 Query: 127 LGETVAWNNMLESLKP---DWTNRHGKRFGISGGVAATLIYYNKEMFKRAGI 175 L + + N + ++ + D+ + G + + G ++YYNKE+F++AGI Sbjct: 135 LNDMLDQNGLKDTYQEGLLDYYSFDGNVYALPDGNNIEVVYYNKELFEQAGI 186