BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0007.p         (128 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001857492.1| cupin 2 domain-containing protein [Burkholde...   199   1e-49
ref|YP_001895911.1| cupin [Burkholderia phytofirmans PsJN] >gi|1...   191   3e-47
ref|ZP_01042442.1| hypothetical protein OS145_01652 [Idiomarina ...   188   3e-46
ref|YP_003907140.1| cyclic nucleotide-binding protein [Burkholde...   187   5e-46
ref|YP_262275.1| cupin domain-containing protein [Pseudomonas fl...   186   1e-45

>ref|YP_001857492.1| cupin 2 domain-containing protein [Burkholderia phymatum STM815]
 gb|ACC70446.1| Cupin 2 conserved barrel domain protein [Burkholderia phymatum
           STM815]
          Length = 124

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 90/119 (75%), Positives = 103/119 (86%)

Query: 10  YRAINFTDKLSLFSEHWSQRVIAEMNDYQFKLAKVKGDFIWHDHADTDEVFIVIDGRLRI 69
           Y+A+NF DKLS   +HW QRVIAEMNDYQFK+ K++GDFIWHDHADTDE FIV++G LRI
Sbjct: 6   YQAVNFADKLSRIHDHWQQRVIAEMNDYQFKVVKIEGDFIWHDHADTDEAFIVLEGVLRI 65

Query: 70  DFRDGAVHLKAGEMFVIPKGVEHKPYAEEEACILLVEPRGVVNTGAEESERTRANDVWI 128
           DFRDGAV L AGEMFV+PKG EHKPYAE+E  +LL+EPRGV NTG+E SERT ANDVWI
Sbjct: 66  DFRDGAVQLSAGEMFVVPKGKEHKPYAEKEVKLLLIEPRGVTNTGSETSERTAANDVWI 124


>ref|YP_001895911.1| cupin [Burkholderia phytofirmans PsJN]
 gb|ACD16687.1| Cupin 2 conserved barrel domain protein [Burkholderia phytofirmans
           PsJN]
          Length = 129

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 86/126 (68%), Positives = 103/126 (81%)

Query: 3   AAINLREYRAINFTDKLSLFSEHWSQRVIAEMNDYQFKLAKVKGDFIWHDHADTDEVFIV 62
           A +  R Y+AINF  KL LF++ W  RV+AEMNDYQFKL +++GDFIWH+HADTDE FIV
Sbjct: 4   AQVTQRPYQAINFAQKLGLFNDQWQARVVAEMNDYQFKLVRIEGDFIWHEHADTDETFIV 63

Query: 63  IDGRLRIDFRDGAVHLKAGEMFVIPKGVEHKPYAEEEACILLVEPRGVVNTGAEESERTR 122
           ++G+LRID RDG V + AGEMFV+PKG+EHKPYAE E  +LL+EPRGV NTG E SERT 
Sbjct: 64  LEGQLRIDMRDGFVLISAGEMFVVPKGIEHKPYAEREVKLLLIEPRGVKNTGEEISERTA 123

Query: 123 ANDVWI 128
           ANDVWI
Sbjct: 124 ANDVWI 129


>ref|ZP_01042442.1| hypothetical protein OS145_01652 [Idiomarina baltica OS145]
 gb|EAQ32823.1| hypothetical protein OS145_01652 [Idiomarina baltica OS145]
          Length = 121

 Score =  188 bits (477), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 84/119 (70%), Positives = 100/119 (84%)

Query: 10  YRAINFTDKLSLFSEHWSQRVIAEMNDYQFKLAKVKGDFIWHDHADTDEVFIVIDGRLRI 69
           + AINF +KL LF+E WS +VIAEMNDYQFK+ K++GDF+WHDH DTDE FIV+ G+LRI
Sbjct: 3   HNAINFKEKLGLFNEQWSPKVIAEMNDYQFKVVKLQGDFVWHDHKDTDETFIVLAGKLRI 62

Query: 70  DFRDGAVHLKAGEMFVIPKGVEHKPYAEEEACILLVEPRGVVNTGAEESERTRANDVWI 128
           DFRDG V L  GEM+V+PKGVEHKPYAE EA +LL+EPRGVVNTG EE  +T ANDVW+
Sbjct: 63  DFRDGHVELSEGEMYVVPKGVEHKPYAEHEAHVLLIEPRGVVNTGDEEDSKTAANDVWV 121


>ref|YP_003907140.1| cyclic nucleotide-binding protein [Burkholderia sp. CCGE1003]
 gb|ADN57849.1| cyclic nucleotide-binding protein [Burkholderia sp. CCGE1003]
          Length = 129

 Score =  187 bits (475), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 83/121 (68%), Positives = 99/121 (81%)

Query: 8   REYRAINFTDKLSLFSEHWSQRVIAEMNDYQFKLAKVKGDFIWHDHADTDEVFIVIDGRL 67
           + YRAINF +KL+LF + W  RV+AEMNDYQFK+ +++GDF+WH HADTDE FIV+DG+L
Sbjct: 9   KAYRAINFAEKLALFDDQWQARVVAEMNDYQFKVVRIEGDFVWHQHADTDETFIVLDGQL 68

Query: 68  RIDFRDGAVHLKAGEMFVIPKGVEHKPYAEEEACILLVEPRGVVNTGAEESERTRANDVW 127
           RID RDG V L AGEMFV+PKG EHKP+AE E  +LLVEPRGV NTG E SERT  ND+W
Sbjct: 69  RIDMRDGFVTLSAGEMFVVPKGTEHKPFAEREVKLLLVEPRGVRNTGEETSERTAVNDLW 128

Query: 128 I 128
           I
Sbjct: 129 I 129


>ref|YP_262275.1| cupin domain-containing protein [Pseudomonas fluorescens Pf-5]
 gb|AAY94417.1| cupin domain protein [Pseudomonas fluorescens Pf-5]
          Length = 128

 Score =  186 bits (471), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 80/119 (67%), Positives = 102/119 (85%)

Query: 10  YRAINFTDKLSLFSEHWSQRVIAEMNDYQFKLAKVKGDFIWHDHADTDEVFIVIDGRLRI 69
           Y++INF  KL LFSEHW+ +VIAEMNDYQFK++K++G+F+WH HADTDE FIV+DG+L I
Sbjct: 10  YQSINFASKLGLFSEHWTPKVIAEMNDYQFKISKLQGEFVWHSHADTDETFIVLDGQLYI 69

Query: 70  DFRDGAVHLKAGEMFVIPKGVEHKPYAEEEACILLVEPRGVVNTGAEESERTRANDVWI 128
           DFRDG V + +GEMFV+PKGVEHKP+AE+E  +LL+EP+GV+NTG +  ERT  NDVWI
Sbjct: 70  DFRDGRVAIGSGEMFVVPKGVEHKPWAEQEVKLLLIEPKGVLNTGDQGGERTAQNDVWI 128