BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0005.p (257 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAL62516.2| Putative exodeoxyribonuclease III [Herminiimonas... 455 e-126 ref|YP_003776507.1| exodeoxyribonuclease III protein [Herbaspiri... 437 e-121 ref|YP_001354134.1| exodeoxyribonuclease III [Janthinobacterium ... 437 e-120 ref|YP_001100637.1| putative exodeoxyribonuclease III [Herminiim... 423 e-116 ref|ZP_08275588.1| Exodeoxyribonuclease III [Oxalobacteraceae ba... 420 e-115 >emb|CAL62516.2| Putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans] Length = 254 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 212/253 (83%), Positives = 230/253 (90%) Query: 3 KIATWNVNSLKVRLPQVLQWLGDNPVDVLCLQETKLTDDKFPQAEINAAGYEVVFSGQKT 62 K+ATWNVNSLKVRLPQV QWL DNPVDVLCLQETK D+KFP AEI AAGY+V F+GQKT Sbjct: 2 KLATWNVNSLKVRLPQVQQWLVDNPVDVLCLQETKTVDEKFPVAEIEAAGYQVAFTGQKT 61 Query: 63 YNGVAILSRHPIADVVKNNPLFEDEQQRIIAATIEGVRYVCAYIPNGQAPDSEKYQYKLK 122 YNGVAILSRHPI DV KNNPL +DEQQRIIA TI+G+R VCAY+PNGQ+PDS+KY YKL Sbjct: 62 YNGVAILSRHPITDVTKNNPLLDDEQQRIIAGTIQGIRIVCAYVPNGQSPDSDKYIYKLN 121 Query: 123 WLAALHTWLAQEQQQHEKLALLGDYNIAPEDRDVHDPAAWVGQNLVSEPERAAFFHLEKM 182 WL ALH WLAQEQQQH +LALLGDYNIAPEDRDVHDPAAW GQ LVSEPERAAF L++M Sbjct: 122 WLKALHEWLAQEQQQHPELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPERAAFVRLQEM 181 Query: 183 GFTDAFRKFEQPEKLFSWWDYRQMGFRLNRGLRIDHILLTAPLAAQCTACVIDKVPRKWE 242 GFTDAFR FEQPEKL+SWWDYRQMGFRLNRGLRIDHILL+APLAA+C+ACVIDKVPRKWE Sbjct: 182 GFTDAFRMFEQPEKLYSWWDYRQMGFRLNRGLRIDHILLSAPLAARCSACVIDKVPRKWE 241 Query: 243 QPSDHAPVIATLD 255 QPSDH PVIAT+D Sbjct: 242 QPSDHTPVIATID 254 >ref|YP_003776507.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] gb|ADJ64599.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 209/252 (82%), Positives = 226/252 (89%) Query: 3 KIATWNVNSLKVRLPQVLQWLGDNPVDVLCLQETKLTDDKFPQAEINAAGYEVVFSGQKT 62 KIATWNVNSLKVRLPQVL+WL +NPVDVLCLQETKLTDDKFP AEI AAGY V FSGQKT Sbjct: 2 KIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQKT 61 Query: 63 YNGVAILSRHPIADVVKNNPLFEDEQQRIIAATIEGVRYVCAYIPNGQAPDSEKYQYKLK 122 YNGVAILSRHP+ DVVKNNPLF DEQQRIIAATIEGVRYVCAYIPNGQ+ +SEKY YKL Sbjct: 62 YNGVAILSRHPMNDVVKNNPLFPDEQQRIIAATIEGVRYVCAYIPNGQSLESEKYPYKLN 121 Query: 123 WLAALHTWLAQEQQQHEKLALLGDYNIAPEDRDVHDPAAWVGQNLVSEPERAAFFHLEKM 182 WLAALH WLAQE+ ++ +LALLGDYNIAPEDRDVHDP AW GQ LVSEPER AF L+ + Sbjct: 122 WLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAFRKLQAL 181 Query: 183 GFTDAFRKFEQPEKLFSWWDYRQMGFRLNRGLRIDHILLTAPLAAQCTACVIDKVPRKWE 242 G TD++R FEQPEK++SWWDYRQMGFRLNRGLRIDHILL+ L +CTACVIDKVPRKWE Sbjct: 182 GLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDKVPRKWE 241 Query: 243 QPSDHAPVIATL 254 QPSDHAPVIATL Sbjct: 242 QPSDHAPVIATL 253 >ref|YP_001354134.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] gb|ABR88644.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] Length = 254 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 205/253 (81%), Positives = 224/253 (88%) Query: 3 KIATWNVNSLKVRLPQVLQWLGDNPVDVLCLQETKLTDDKFPQAEINAAGYEVVFSGQKT 62 KIATWNVNSLKVRLPQVLQWL DNPVDVLCLQETK ++KFP AEI AAGY VV++GQKT Sbjct: 2 KIATWNVNSLKVRLPQVLQWLTDNPVDVLCLQETKTVNEKFPLAEIEAAGYHVVYTGQKT 61 Query: 63 YNGVAILSRHPIADVVKNNPLFEDEQQRIIAATIEGVRYVCAYIPNGQAPDSEKYQYKLK 122 YNGVAILSRHPI DVVKNNPLF+DE QRII TI+GVR +CAYIPNGQ+ +S+KYQYKL+ Sbjct: 62 YNGVAILSRHPIDDVVKNNPLFDDEHQRIIIGTIQGVRIICAYIPNGQSLESDKYQYKLR 121 Query: 123 WLAALHTWLAQEQQQHEKLALLGDYNIAPEDRDVHDPAAWVGQNLVSEPERAAFFHLEKM 182 WLA LH LA E +QHE +ALLGDYNIAPEDRDVHDP AW GQ LVSEPERAAF +++M Sbjct: 122 WLAGLHELLAHELKQHENVALLGDYNIAPEDRDVHDPVAWQGQVLVSEPERAAFVRMQEM 181 Query: 183 GFTDAFRKFEQPEKLFSWWDYRQMGFRLNRGLRIDHILLTAPLAAQCTACVIDKVPRKWE 242 GFTDAFR FEQ EKL+SWWDYRQMGFRLNRGLRIDHILL+ LA +CTACVIDKVPRKWE Sbjct: 182 GFTDAFRMFEQAEKLYSWWDYRQMGFRLNRGLRIDHILLSPSLAKRCTACVIDKVPRKWE 241 Query: 243 QPSDHAPVIATLD 255 QPSDH PVIATLD Sbjct: 242 QPSDHTPVIATLD 254 >ref|YP_001100637.1| putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans] Length = 237 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 196/235 (83%), Positives = 213/235 (90%) Query: 21 QWLGDNPVDVLCLQETKLTDDKFPQAEINAAGYEVVFSGQKTYNGVAILSRHPIADVVKN 80 QWL DNPVDVLCLQETK D+KFP AEI AAGY+V F+GQKTYNGVAILSRHPI DV KN Sbjct: 3 QWLVDNPVDVLCLQETKTVDEKFPVAEIEAAGYQVAFTGQKTYNGVAILSRHPITDVTKN 62 Query: 81 NPLFEDEQQRIIAATIEGVRYVCAYIPNGQAPDSEKYQYKLKWLAALHTWLAQEQQQHEK 140 NPL +DEQQRIIA TI+G+R VCAY+PNGQ+PDS+KY YKL WL ALH WLAQEQQQH + Sbjct: 63 NPLLDDEQQRIIAGTIQGIRIVCAYVPNGQSPDSDKYIYKLNWLKALHEWLAQEQQQHPE 122 Query: 141 LALLGDYNIAPEDRDVHDPAAWVGQNLVSEPERAAFFHLEKMGFTDAFRKFEQPEKLFSW 200 LALLGDYNIAPEDRDVHDPAAW GQ LVSEPERAAF L++MGFTDAFR FEQPEKL+SW Sbjct: 123 LALLGDYNIAPEDRDVHDPAAWAGQVLVSEPERAAFVRLQEMGFTDAFRMFEQPEKLYSW 182 Query: 201 WDYRQMGFRLNRGLRIDHILLTAPLAAQCTACVIDKVPRKWEQPSDHAPVIATLD 255 WDYRQMGFRLNRGLRIDHILL+APLAA+C+ACVIDKVPRKWEQPSDH PVIAT+D Sbjct: 183 WDYRQMGFRLNRGLRIDHILLSAPLAARCSACVIDKVPRKWEQPSDHTPVIATID 237 >ref|ZP_08275588.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] gb|EGF30936.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] Length = 256 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/252 (78%), Positives = 216/252 (85%) Query: 3 KIATWNVNSLKVRLPQVLQWLGDNPVDVLCLQETKLTDDKFPQAEINAAGYEVVFSGQKT 62 K+ATWNVNSLKVRLPQVLQWL DNP+DVLCLQETK D+KFPQAEI AAGY V FSGQKT Sbjct: 2 KLATWNVNSLKVRLPQVLQWLADNPIDVLCLQETKTIDEKFPQAEIEAAGYHVAFSGQKT 61 Query: 63 YNGVAILSRHPIADVVKNNPLFEDEQQRIIAATIEGVRYVCAYIPNGQAPDSEKYQYKLK 122 YNGVAILS+ P+ DVV+NNP F DEQQR+IAATI+GVR +CAYIPNGQAPDS+KYQYKL+ Sbjct: 62 YNGVAILSKQPMTDVVRNNPHFADEQQRLIAATIDGVRVICAYIPNGQAPDSDKYQYKLR 121 Query: 123 WLAALHTWLAQEQQQHEKLALLGDYNIAPEDRDVHDPAAWVGQNLVSEPERAAFFHLEKM 182 WL L WLA E H K ALLGDYNIAPEDRDVHDPAAWVGQ LVSEPERAAF + + Sbjct: 122 WLDGLQQWLALEMAAHPKFALLGDYNIAPEDRDVHDPAAWVGQILVSEPERAAFQRMIAL 181 Query: 183 GFTDAFRKFEQPEKLFSWWDYRQMGFRLNRGLRIDHILLTAPLAAQCTACVIDKVPRKWE 242 TDAFR FEQ +KLFSWWDYRQMGFR N G+RIDHILL+ LAA CT+CVIDKVPRKWE Sbjct: 182 ELTDAFRLFEQADKLFSWWDYRQMGFRRNAGMRIDHILLSKELAAACTSCVIDKVPRKWE 241 Query: 243 QPSDHAPVIATL 254 QPSDH PV+AT+ Sbjct: 242 QPSDHTPVVATI 253