BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0003.p (248 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776504.1| outer membrane protein V [Herbaspirillum ser... 297 1e-78 ref|YP_001156815.1| MltA-interacting MipA family protein [Polynu... 216 3e-54 ref|ZP_08274252.1| MltA-interacting MipA family protein [Oxaloba... 212 5e-53 ref|YP_003524058.1| MltA-interacting MipA family protein [Sidero... 187 1e-45 ref|YP_001797931.1| MltA-interacting MipA family protein [Polynu... 142 5e-32 >ref|YP_003776504.1| outer membrane protein V [Herbaspirillum seropedicae SmR1] gb|ADJ64596.1| outer membrane protein V (Scaffolding protein for murein-synthesizing holoenzyme) protein [Herbaspirillum seropedicae SmR1] Length = 253 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 140/245 (57%), Positives = 181/245 (73%) Query: 4 TLLCALLLSFAGHAAAQQAAEADFPDHLRGDIGPGVFRLERNILGKSDVTQVLPYAYFDY 63 +L C L + A AA Q D + GDIG GV+R++RN L +S T VLPYAYFDY Sbjct: 9 SLACCALPALAQQAAPQDTDPLQLQDRITGDIGGGVYRMDRNGLDRSSRTTVLPYAYFDY 68 Query: 64 GRFFARLDTFGVKTVKFGAGYLELAARVNFDHMDAERGLNRRSNSVPLGIGTLQETRFGA 123 GRFFAR+DTFGVKT + G GYLELA R+N + DA+ GL RRS+ +PLG+G+ QET GA Sbjct: 69 GRFFARVDTFGVKTARMGYGYLELAGRINLEGFDAQGGLQRRSDPIPLGLGSFQETPIGA 128 Query: 124 FFLNAFYDVNKSHGTLLEAVYAAQFDLGRASFYPQVGIERRSSSYNNYFYGVTGQESTAS 183 FFLN F+D NKSHGTL EA+YAAQ D+G SFYPQVG+E R S YN+YFYGV+GQE+++S Sbjct: 129 FFLNVFHDFNKSHGTLAEAIYAAQLDVGPVSFYPQVGVEYRDSRYNDYFYGVSGQEASSS 188 Query: 184 GFREYHAGASTTPMLGLTIEMPVAENWVANVTFRRKWLGNGIANSPIVNHSTENMGLVAI 243 G Y AG+ST+P+LGL +MP++ NW N+T RRKWL N I++SPI+ T+++ ++A+ Sbjct: 189 GLPAYRAGSSTSPLLGLVADMPISGNWRLNLTLRRKWLDNAISDSPIIRRKTDDLAILAL 248 Query: 244 NYHFK 248 Y FK Sbjct: 249 TYRFK 253 >ref|YP_001156815.1| MltA-interacting MipA family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP35251.1| MltA-interacting MipA family protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 256 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 103/252 (40%), Positives = 154/252 (61%), Gaps = 5/252 (1%) Query: 2 NKTLLCALLLSFAGHAAAQQAAEADFPDHLRGDIGPGVFRLERNILGKSDVTQVLPYAYF 61 KTL+C ++ + A + PDHL GD+G + +I + T LPYA+ Sbjct: 5 QKTLVCLFIVLLSTSLYADEDVPDGLPDHLVGDVGIATYTTNLHIGTEGVQTLPLPYAFV 64 Query: 62 DYGRFFARLDTFGVKTVKFGAGYLELAARVNFDHMDAERGLN----RRSNSVPLGIGTLQ 117 DY R F R+D G+KT+K G GYLE+ ++N D + +N R++ +PLGIGT Q Sbjct: 65 DYKRAFVRIDEVGIKTLKMGYGYLEVIGKINLDSYKVKSPINGATLNRTDPIPLGIGTFQ 124 Query: 118 ETRFGAFFLNAFYDVNKSHGTLLEAVYAAQFDL-GRASFYPQVGIERRSSSYNNYFYGVT 176 ET G FF+NA++D KSHG L E +Y A+ + + + YPQ+G+ER+SS Y NY+YG++ Sbjct: 125 ETPVGGFFVNAYHDFGKSHGALYELLYFAEIETYKKVTLYPQLGVERQSSQYANYYYGIS 184 Query: 177 GQESTASGFREYHAGASTTPMLGLTIEMPVAENWVANVTFRRKWLGNGIANSPIVNHSTE 236 G +S +G+ Y A A++ + GL IE+PV +NW N+ +RKW+G GI NSP++N S + Sbjct: 185 GSDSLQTGYSAYTAPATSNLIAGLMIEIPVVDNWYFNIYGKRKWMGGGINNSPVMNRSFQ 244 Query: 237 NMGLVAINYHFK 248 + A+ Y FK Sbjct: 245 DNLFAALAYRFK 256 >ref|ZP_08274252.1| MltA-interacting MipA family protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32261.1| MltA-interacting MipA family protein [Oxalobacteraceae bacterium IMCC9480] Length = 240 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 113/230 (49%), Positives = 138/230 (60%), Gaps = 5/230 (2%) Query: 23 AEADFPDHLRGDIGPGVFRLERNILGKSDVTQVLPYAYFDYGRFFARLDTFGVKTVKFGA 82 A+ P L GD G V+ N+ G S +LPY Y DY R FAR DTFGVKTV GA Sbjct: 12 AQTALPQRLTGDAGAAVYATTANVRGASYRPSLLPYVYADYQRLFARTDTFGVKTVALGA 71 Query: 83 GYLELAARVNFDHMDAE----RGLNRRSNSVPLGIGTLQETRFGAFFLNAFYDVNKSHGT 138 GYLEL RV+ + A+ RGL RS VPLGIGT QET +G FF+ A +DV+ S G+ Sbjct: 72 GYLELVGRVSQEGYKADSAALRGLRDRSTPVPLGIGTYQETPYGGFFVYAMHDVS-SGGS 130 Query: 139 LLEAVYAAQFDLGRASFYPQVGIERRSSSYNNYFYGVTGQESTASGFREYHAGASTTPML 198 LLEA YAA+F YPQVG+ERRS++Y + YGV ES SG Y AGAST P+ Sbjct: 131 LLEATYAAEFSFAGFKIYPQVGVERRSAAYVQHVYGVDAAESARSGIASYRAGASTVPVA 190 Query: 199 GLTIEMPVAENWVANVTFRRKWLGNGIANSPIVNHSTENMGLVAINYHFK 248 GL E+ + W V RR WL I +SP+V+ T+ G VA+ Y FK Sbjct: 191 GLAAELSLGGPWHLLVQARRSWLDAAIRDSPLVSTRTQTNGFVAVTYAFK 240 >ref|YP_003524058.1| MltA-interacting MipA family protein [Sideroxydans lithotrophicus ES-1] gb|ADE11671.1| MltA-interacting MipA family protein [Sideroxydans lithotrophicus ES-1] Length = 259 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 149/245 (60%), Gaps = 8/245 (3%) Query: 8 ALLLSFAGHAAAQQAAEADFPDHLRGDIGPGVFRLERNILGKSDVTQVLPYAYFDYGRFF 67 A L+S A A +AAE FP L+GDIG G + I GK D VLPYA F+YGR F Sbjct: 19 ACLISIA--TMATEAAE--FPGSLQGDIGMGAYYTHSIIRGKGDEVSVLPYADFEYGRMF 74 Query: 68 ARLDTFGVKTVKFGAGYLELAARVNFD----HMDAERGLNRRSNSVPLGIGTLQETRFGA 123 AR+DT G+KT++ G G+LEL R++ D + + +G+ R S+PLGIGTLQ T GA Sbjct: 75 ARVDTLGIKTLQMGYGHLELVGRISQDGFSTNSSSLQGIASRETSIPLGIGTLQVTPLGA 134 Query: 124 FFLNAFYDVNKSHGTLLEAVYAAQFDLGRASFYPQVGIERRSSSYNNYFYGVTGQESTAS 183 +N F+DV +S G EA+Y + DL R + YP +G + +S Y Y+YG++ QE+ AS Sbjct: 135 LMVNLFHDVRRSGGDWFEAIYGGEIDLRRLTLYPLIGADYQSREYVGYYYGISPQEAAAS 194 Query: 184 GFREYHAGASTTPMLGLTIEMPVAENWVANVTFRRKWLGNGIANSPIVNHSTENMGLVAI 243 + Y S + GL ++ +++++ N+ RRKWLG+ I SPIV+ + G +A+ Sbjct: 195 QYAAYAPAGSLNGLFGLIGDIELSDSYHLNLYVRRKWLGSSIRQSPIVSQRYLDTGYLAL 254 Query: 244 NYHFK 248 +Y FK Sbjct: 255 SYRFK 259 >ref|YP_001797931.1| MltA-interacting MipA family protein [Polynucleobacter necessarius subsp. necessarius STIR1] gb|ACB44317.1| MltA-interacting MipA family protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 167 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 68/167 (40%), Positives = 100/167 (59%), Gaps = 5/167 (2%) Query: 87 LAARVNFDHMDAERGLN----RRSNSVPLGIGTLQETRFGAFFLNAFYDVNKSHGTLLEA 142 +A +++ D + +N RS+ +P+G+GTLQET G FF NA+YD KS G L E Sbjct: 1 MAGKISLDSYKVKPPINGYGINRSDPIPIGVGTLQETPIGGFFANAYYDFGKSKGMLYEL 60 Query: 143 VYAAQFD-LGRASFYPQVGIERRSSSYNNYFYGVTGQESTASGFREYHAGASTTPMLGLT 201 Y + + + YPQ+G ER+S+ Y NY+YG+ ES A+G+ Y A A+T GL Sbjct: 61 SYFGELETYKQIVVYPQIGAERQSNQYANYYYGINPGESLATGYSAYSAPATTNLFAGLM 120 Query: 202 IEMPVAENWVANVTFRRKWLGNGIANSPIVNHSTENMGLVAINYHFK 248 IE+P+ + W N+ +RKW+G GI NSP++N ++ AI Y FK Sbjct: 121 IEIPIIDQWFVNLYTKRKWMGGGINNSPVMNRPFQDTIFTAIAYRFK 167