BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0169.p         (127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08273046.1| LSU ribosomal protein L19p [Oxalobacteraceae ...   236   6e-61
ref|YP_001098952.1| 50S ribosomal protein L19 [Herminiimonas ars...   235   2e-60
ref|YP_003774932.1| 50S ribosomal protein L19 [Herbaspirillum se...   230   6e-59
ref|YP_004751825.1| 50S ribosomal protein L19p [Collimonas fungi...   223   8e-57
ref|YP_001352284.1| 50S ribosomal protein L19 [Janthinobacterium...   221   3e-56

>ref|ZP_08273046.1| LSU ribosomal protein L19p [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF33493.1| LSU ribosomal protein L19p [Oxalobacteraceae bacterium IMCC9480]
          Length = 128

 Score =  236 bits (603), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 120/127 (94%), Positives = 122/127 (96%)

Query: 1   MDLIQQLEQEEIARLAKNIPEFAPGDTVIVSVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60
           MDLIQQLEQEEIARL K+IP+FAPGDTVIVSVNVVEGTRKRAQAYEGVVISRRNRGLNSN
Sbjct: 1   MDLIQQLEQEEIARLGKSIPDFAPGDTVIVSVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60

Query: 61  FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPNRR 120
           FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPNRR
Sbjct: 61  FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPNRR 120

Query: 121 GTAKAEA 127
             AK  A
Sbjct: 121 VVAKKAA 127


>ref|YP_001098952.1| 50S ribosomal protein L19 [Herminiimonas arsenicoxydans]
 sp|A4G2T8.1|RL19_HERAR RecName: Full=50S ribosomal protein L19
 emb|CAL60825.1| 50S ribosomal subunit protein L19 [Herminiimonas arsenicoxydans]
          Length = 128

 Score =  235 bits (599), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 119/127 (93%), Positives = 122/127 (96%)

Query: 1   MDLIQQLEQEEIARLAKNIPEFAPGDTVIVSVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60
           MDLIQ LEQEEIARLAKNIP+FAPGDTVIV+VNVVEGTRKRAQAYEGVVISRRNRGLNSN
Sbjct: 1   MDLIQTLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60

Query: 61  FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPNRR 120
           FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLP RR
Sbjct: 61  FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPQRR 120

Query: 121 GTAKAEA 127
             +KA A
Sbjct: 121 VVSKAAA 127


>ref|YP_003774932.1| 50S ribosomal protein L19 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63024.1| 50S ribosomal subunit protein L19 [Herbaspirillum seropedicae SmR1]
          Length = 127

 Score =  230 bits (586), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 115/119 (96%), Positives = 119/119 (100%)

Query: 1   MDLIQQLEQEEIARLAKNIPEFAPGDTVIVSVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60
           MDLIQQLEQEEIARLAKNIP+FAPGDTVIV+VNVVEGTRKRAQAYEGVVI+RRNRGLNSN
Sbjct: 1   MDLIQQLEQEEIARLAKNIPDFAPGDTVIVNVNVVEGTRKRAQAYEGVVIARRNRGLNSN 60

Query: 61  FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPNR 119
           FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLP+R
Sbjct: 61  FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSR 119


>ref|YP_004751825.1| 50S ribosomal protein L19p [Collimonas fungivorans Ter331]
 gb|AEK61002.1| LSU ribosomal protein L19p [Collimonas fungivorans Ter331]
          Length = 130

 Score =  223 bits (568), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 120/125 (96%), Positives = 122/125 (97%)

Query: 1   MDLIQQLEQEEIARLAKNIPEFAPGDTVIVSVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60
           MDLIQQLEQEEIARL KNIP+FAPGDTV+VSVNVVEGTRKRAQAYEGVVISRRNRGLNSN
Sbjct: 1   MDLIQQLEQEEIARLGKNIPDFAPGDTVVVSVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60

Query: 61  FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPNRR 120
           FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLP RR
Sbjct: 61  FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPQRR 120

Query: 121 GTAKA 125
            TAKA
Sbjct: 121 NTAKA 125


>ref|YP_001352284.1| 50S ribosomal protein L19 [Janthinobacterium sp. Marseille]
 sp|A6SVI7.1|RL19_JANMA RecName: Full=50S ribosomal protein L19
 gb|ABR88676.1| large subunit ribosomal protein L19 [Janthinobacterium sp.
           Marseille]
          Length = 128

 Score =  221 bits (562), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 119/127 (93%), Positives = 122/127 (96%)

Query: 1   MDLIQQLEQEEIARLAKNIPEFAPGDTVIVSVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60
           MDLIQQLEQEEIARLAKNIP+FAPGDTV+V+VNVVEGTRKRAQAYEGVVISRRNRGLNSN
Sbjct: 1   MDLIQQLEQEEIARLAKNIPDFAPGDTVVVNVNVVEGTRKRAQAYEGVVISRRNRGLNSN 60

Query: 61  FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPNRR 120
           FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLP RR
Sbjct: 61  FIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPQRR 120

Query: 121 GTAKAEA 127
             AK  A
Sbjct: 121 VAAKQAA 127