BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0159.p         (74 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774939.1| tryptophanyl-tRNA synthetase [Herbaspirillum...   114   7e-24
ref|YP_001352535.1| tryptophanyl-tRNA synthetase II [Janthinobac...   104   4e-21
ref|YP_002796661.1| tryptophanyl-tRNA synthetase II [Laribacter ...   102   3e-20
ref|YP_003609319.1| tryptophanyl-tRNA synthetase [Burkholderia s...    91   6e-17
ref|YP_554890.1| tryptophanyl-tRNA synthetase II [Burkholderia x...    91   6e-17

>ref|YP_003774939.1| tryptophanyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gb|ADJ63031.1| tryptophanyl-tRNA synthetase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 344

 Score =  114 bits (284), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/70 (78%), Positives = 63/70 (90%)

Query: 5   CRGGLGDSVLKRRLEGHLQELLEPIRTRREQWQQERGEVLAILRRGTERARAAAAQTVSE 64
            RGGLGDSV+KRRLEG LQE+LEPIRTRRE++ ++RGEVLAIL+RGTERA A AAQT+SE
Sbjct: 274 TRGGLGDSVVKRRLEGILQEMLEPIRTRREEFAKDRGEVLAILKRGTERASAVAAQTMSE 333

Query: 65  VRGALGLNYF 74
           V  ALGLNYF
Sbjct: 334 VNAALGLNYF 343


>ref|YP_001352535.1| tryptophanyl-tRNA synthetase II [Janthinobacterium sp. Marseille]
 gb|ABR88261.1| tryptophanyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 344

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/69 (71%), Positives = 61/69 (88%)

Query: 6   RGGLGDSVLKRRLEGHLQELLEPIRTRREQWQQERGEVLAILRRGTERARAAAAQTVSEV 65
           RGGLGDSV+KRRLE  LQ ++EPIRTRRE + Q++GEVLA+L+RGTERARA AA+T+SEV
Sbjct: 275 RGGLGDSVVKRRLEAQLQAMIEPIRTRREAYAQDKGEVLAMLKRGTERARAVAAKTLSEV 334

Query: 66  RGALGLNYF 74
             ++GLNYF
Sbjct: 335 NASMGLNYF 343


>ref|YP_002796661.1| tryptophanyl-tRNA synthetase II [Laribacter hongkongensis HLHK9]
 gb|ACO75652.1| TrpS2 [Laribacter hongkongensis HLHK9]
          Length = 337

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 59/69 (85%)

Query: 6   RGGLGDSVLKRRLEGHLQELLEPIRTRREQWQQERGEVLAILRRGTERARAAAAQTVSEV 65
           RGGLGDSV+K+RLE  LQE++EPIR RRE + Q+  EV+ IL+RGT+ ARA AAQT+SEV
Sbjct: 267 RGGLGDSVVKKRLEARLQEMIEPIRQRREAFAQDPAEVMNILKRGTDNARAVAAQTLSEV 326

Query: 66  RGALGLNYF 74
           +GA+G+NYF
Sbjct: 327 KGAMGINYF 335


>ref|YP_003609319.1| tryptophanyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gb|ADG19808.1| tryptophanyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 338

 Score = 90.9 bits (224), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 54/69 (78%)

Query: 6   RGGLGDSVLKRRLEGHLQELLEPIRTRREQWQQERGEVLAILRRGTERARAAAAQTVSEV 65
           RGGLGDSV+KR L   LQ L+EPIR RR + +++  EVLAILRRGT RAR  A +T+SEV
Sbjct: 268 RGGLGDSVIKRVLNERLQSLIEPIRARRRELEEDPAEVLAILRRGTMRAREVAGETLSEV 327

Query: 66  RGALGLNYF 74
           RGALGL YF
Sbjct: 328 RGALGLTYF 336


>ref|YP_554890.1| tryptophanyl-tRNA synthetase II [Burkholderia xenovorans LB400]
 gb|ABE35540.1| tryptophanyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 342

 Score = 90.9 bits (224), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 53/69 (76%)

Query: 6   RGGLGDSVLKRRLEGHLQELLEPIRTRREQWQQERGEVLAILRRGTERARAAAAQTVSEV 65
           RGGLGDSV+KR L   LQ +L PIR RR +++ +R EVL +LRRGT RAR  A  TVSEV
Sbjct: 272 RGGLGDSVVKRVLNEQLQSMLAPIRERRREFEADRAEVLNVLRRGTLRAREVAGATVSEV 331

Query: 66  RGALGLNYF 74
           +GALGLNYF
Sbjct: 332 KGALGLNYF 340