BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0133.p (1348 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774958.1| signal peptide protein [Herbaspirillum serop... 1519 0.0 ref|YP_004751832.1| putative signal peptide protein [Collimonas ... 1128 0.0 ref|ZP_07676299.1| signal peptide protein [Ralstonia sp. 5_7_47F... 1032 0.0 ref|YP_001900155.1| hypothetical protein Rpic_2596 [Ralstonia pi... 1032 0.0 ref|YP_003751741.1| hypothetical protein RPSI07_1085 [Ralstonia ... 1031 0.0 >ref|YP_003774958.1| signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ63050.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 1300 Score = 1519 bits (3932), Expect = 0.0, Method: Compositional matrix adjust. Identities = 783/1296 (60%), Positives = 988/1296 (76%), Gaps = 31/1296 (2%) Query: 51 TDSGTRSAWRLAVWSMQGKLSGVHGGGSLADGVHLRNLRYRDAAMQLDIDRIDAAWDLSL 110 T+SG R W AV ++ GKLSG GG++ADG+HLR + Y+D LDIDR+DA+W LSL Sbjct: 15 TESGARLLWNTAVKTLGGKLSGQLLGGTVADGLHLRAVHYQDGQRILDIDRLDASWRLSL 74 Query: 111 RQRRLTVSYLRVGTVDINKQPLPPTPTIMPSSLSLPLALNLNDVSLQKLILQQGTSVTEL 170 +RR +++YLR GTV +N+QP P P+ +P+SLSLPLAL + ++SL K L QGTS TEL Sbjct: 75 LKRRFSLAYLRAGTVQLNQQPSPSEPSSLPASLSLPLALEIGEISLDKFSLTQGTSTTEL 134 Query: 171 SGLQLHGTSDGVQHTLVLDKLTTAFGQATALLHLNGKQPFALNGGVELAGLYQQDQQDQQ 230 S L+LHG+SDGVQHTLVLD L T +GQATAL+HLNGK PF + GG+EL G+YQ + Sbjct: 135 SKLRLHGSSDGVQHTLVLDSLVTPYGQATALVHLNGKAPFDIGGGLELGGVYQHGE---- 190 Query: 231 EKSSEKFQLAAQLSGSLQELGIALTATGDKLNGKADIVATPFSTVPLKRAKVDLQHVNPQ 290 E++QLAAQLSGSLQELG+AL A+GDKL G ADI+ATPF+ VPLKRA+VDLQH+NPQ Sbjct: 191 --FKEQYQLAAQLSGSLQELGVALKASGDKLKGDADIIATPFAAVPLKRARVDLQHLNPQ 248 Query: 291 AFSNGAPKADLQ-----RPVAGATAEN-LRVAGPVDIVNAIPGSLDQQRLPLTSIKARVD 344 AF AP ADL P AG A+ L+VAG ++I NA PGSLDQQ LPL S A + Sbjct: 249 AFHATAPAADLSVRADLAPSAGQAADAPLKVAGRIEINNARPGSLDQQLLPLLSASADLQ 308 Query: 345 LGVDSQQLDDLRIALLKNATLTGKGQFHPADK--------AGRFDFDVAGLDLQAIHSEL 396 L + Q L L I L +N + G GQF P + AGR V+ LDL IH ++ Sbjct: 309 LDLQQQALTRLEIRLPRNGRIEGAGQFQPGSQDPAQPTPMAGRLALRVSELDLSQIHHQV 368 Query: 397 KPTRLAGPLNVVLKPGGQDIMLKLQDAQYSIQANAAVTPEQVTLKQVLLTAQKARLELAG 456 +PTRL+GP+ L P + ++L LQD+ + ++ + + V L++ LTA K+RLE AG Sbjct: 369 RPTRLSGPVEATLGPDARQLLLTLQDSALRLHLDSTLRADTVELREASLTAGKSRLEAAG 428 Query: 457 TLGTVGAMEYAFKGKLANFDPSLWMKTGKAPANAKA---GTAAHAISARINMDFDTAGSL 513 ++ TVGAM+YAFKG+L +FDP+ ++T AP A A G AI ARIN+DF+ AG L Sbjct: 429 SMKTVGAMDYAFKGRLVDFDPTAVLQTVTAPTAASARRGGKTVAAIPARINLDFNAAGLL 488 Query: 514 SPELQARLNFIIHDSSYDQLPMSGSGKLQLAGKRLLPSSLDMLVAGNQLQLKGAFGAPSD 573 SPEL+ +L F IHDSSY LPM+G G + LAG RLLPS + VAGN L L G+FGA +D Sbjct: 489 SPELRLKLGFTIHDSSYGDLPMAGRGDIDLAGMRLLPSQAHLQVAGNTLDLNGSFGAAND 548 Query: 574 KLDIHIDAPQLARLGFGVAGMLKLDGQLTGSMQRPNLRATYSGRQLAFGPHHLNRVDGQA 633 KL + IDAPQLARLG+G++G+L+LDGQL G+ QRP+L+A+Y QL FGPH L + GQA Sbjct: 549 KLKLKIDAPQLARLGYGLSGLLRLDGQLGGTRQRPSLQASYQAEQLGFGPHKLQHLAGQA 608 Query: 634 DLQTDLNASAASASNKLQLSIDGDGYSGPDAALKQLKLSLSGTFGEHKLAVQADGRVRNQ 693 ++ ++L A AS N+L L+++GDGYSGP A L QL + L GT+ +H L+++A+G++ N+ Sbjct: 609 EIHSNLAAGVASPENRLALTLEGDGYSGPQAELAQLAVKLDGTYAKHSLSLKANGKLLNR 668 Query: 694 TLALQLNAHGKVTQDKNG-YGWNGVIDKLDNQGLPRIALAAPLSLALAADTLVAGATRLN 752 LAL L AHG+VT+ G YGWNG ID+L N G PRIA+ PL+L + + + AG+TR+ Sbjct: 669 PLALTLAAHGQVTEKTRGQYGWNGSIDQLSNDGFPRIAMLHPLALQASPEAVEAGSTRIE 728 Query: 753 VDRMAIDLRSLSYQQGRIRSEGSAKTLDVGRILELVREMSGASAAAPPAKTDLVLDADWN 812 +DR A+DLR LS++QGRI S G + LDVGR+LEL +++ AAAPP KTDLVLD+DW+ Sbjct: 729 IDRTALDLRHLSWRQGRIASAGEVRALDVGRLLELAQQLG---AAAPPMKTDLVLDSDWD 785 Query: 813 FSLAETVSGFFQVLRKSGDVSVNTGASQVALGLSALQLRVDLAGHEAKFNGGVTASRIGT 872 FSLAE+ G+ Q+ R+SGD+ + T + LGLS L+LR D G + + +G V ASRIGT Sbjct: 786 FSLAESARGYVQIARQSGDLRLVTSNGEATLGLSELKLRSDFQGEQMRLSGRVDASRIGT 845 Query: 873 IEAQGQAGLLRQDGVLTLLPDSPLTAHARLNVPEVKTIGALLGPQYSLDGKLAMDINAAG 932 + GQ GL R D +LTL SPL +ARL +PE+K IG L+GPQ SL+GKL+ D+N AG Sbjct: 846 LALGGQIGLQRVDQLLTLADGSPLALNARLELPELKRIGDLIGPQVSLNGKLSADLNVAG 905 Query: 933 TLAKPRLSGAINGDSLAVTLFDQGIQLKDGTVRIVMDDNVIDLRQIEFHGGEGTLRATGK 992 TLA+P+LSGA+NGD LAVT FDQGIQLKDG VRIVMD NVIDLRQIEFHGG GTLRA GK Sbjct: 906 TLAQPKLSGAVNGDDLAVTQFDQGIQLKDGIVRIVMDSNVIDLRQIEFHGGRGTLRAGGK 965 Query: 993 VKLGDADPDLNAAIVADRLQLFASPDRQLMLSGQAKLANVNEQLRIDGKFMVDKALFDLP 1052 ++LG +PDLNA + A++L+LFASPDR+LMLSGQ K++NVNEQL +DGKF VD ALFDLP Sbjct: 966 IQLGADNPDLNATLTAEQLELFASPDRRLMLSGQGKISNVNEQLHVDGKFTVDHALFDLP 1025 Query: 1053 KSSAPKLGDDVVIVRKDKDGKSRAKAGAAATSKEKLTAATEKPAGRFAPVMNIVVDLGNN 1112 KSSAPKLGDDVVI+ + GK+ + G A+SK++L AATEKPA +FAP +NI VDLGN+ Sbjct: 1026 KSSAPKLGDDVVII--SRSGKN--QVGGQASSKQRLEAATEKPASKFAPFINIAVDLGND 1081 Query: 1113 FRFNGSGADLKLRGEMNVRSEPLLPLRATGTVRVSEGTYEAFGTKLNIERGIINFQGPIS 1172 FRF GSGADL+LRGEM VRSEPL P+RA+GT+ V+EG+YEAFGTKLNIERGIINFQGPI+ Sbjct: 1082 FRFRGSGADLRLRGEMAVRSEPLSPMRASGTINVAEGSYEAFGTKLNIERGIINFQGPIA 1141 Query: 1173 NPNLNILAMRRNQDVEAGVEVTGNANQPRVRLVSEPNVPDDEKLSWMMFGHGSDSSGLGQ 1232 NPN+NILAMRRNQDVEAGV VTGNANQPRV+LVSEPNVPDDEKLSWMMFGHG+D+S +GQ Sbjct: 1142 NPNINILAMRRNQDVEAGVSVTGNANQPRVQLVSEPNVPDDEKLSWMMFGHGTDNSSIGQ 1201 Query: 1233 RSASSQALAFVGNYGGKKIAKDIGLDQFSIGASESGLSDEQVVNLGKSISEKLSLGYEQS 1292 R+ASSQALA VGN GGK+IAKDIGLDQFSIG+SESGL+++QVVNLGK+I+EK++LGYEQS Sbjct: 1202 RTASSQALALVGNMGGKRIAKDIGLDQFSIGSSESGLTNDQVVNLGKAITEKITLGYEQS 1261 Query: 1293 LTGAASIAKATWQLSRRWSLVARTGTIFSIWIFYSQ 1328 L GAAS+AKATWQ+SRRWS+VAR GTI + I +++ Sbjct: 1262 LQGAASVAKATWQISRRWSVVARAGTINGLNILFNR 1297 >ref|YP_004751832.1| putative signal peptide protein [Collimonas fungivorans Ter331] gb|AEK61009.1| putative signal peptide protein [Collimonas fungivorans Ter331] Length = 1027 Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/1026 (56%), Positives = 743/1026 (72%), Gaps = 20/1026 (1%) Query: 313 LRVAGPVDIVNAIPGSLDQQRLPLTSIKARVDLGVDSQQLDDLRIALLKNATLTGKGQFH 372 L V+GP+ IVNA+ GSLDQ RLPL S A + L +QQL L++ L K+A+++G+G++H Sbjct: 7 LTVSGPIRIVNAMAGSLDQDRLPLVSAGAELRLDTQAQQLSRLQLKLQKDASISGQGEYH 66 Query: 373 PADKA---GRFDFDVAGLDLQAIHSELKPTRLAGPLNVVLKPGGQDIMLKLQDAQYSIQA 429 K G F FDVAGLDLQA+H +LKPT+L GP+ V L P Q I + L DA Y + Sbjct: 67 SDGKNKHNGEFSFDVAGLDLQALHGKLKPTQLRGPVKVRLTPDNQQISMDLADATYKAKL 126 Query: 430 NAAVTPEQVTLKQVLLTAQKARLELAGTLGTVGAMEYAFKGKLANFDPSLWMKTGKAPAN 489 + +QV +K L A ARL+++G+L M YA KG L +F+P LW+ + AP Sbjct: 127 ETVIDAKQVAVKTAQLAAGPARLDISGSLARNAGMAYAVKGSLRDFNPFLWINSA-APVK 185 Query: 490 AKAGTAAHAI--------SARINMDFDTAGSLSPELQARLNFIIHDSSYDQLPMSGSGKL 541 A AA A +A INMD D +G+L+PEL+ +L F I DS YDQLPM+G+G L Sbjct: 186 RAAKGAAKAPVAPKAKAVTANINMDIDASGNLTPELKMKLKFAIRDSRYDQLPMTGNGLL 245 Query: 542 QLAGKRLLPSSLDMLVAGNQLQLKGAFGAPSDKLDIHIDAPQLARLGFGVAGMLKLDGQL 601 LAG RLLPS + + VAGN+LQ KG+FGA D+L++ +DAPQL LGFG++G L LDGQL Sbjct: 246 NLAGSRLLPSDVALSVAGNELQAKGSFGAAGDRLNLKLDAPQLQGLGFGISGALHLDGQL 305 Query: 602 TGSMQRPNLRATYSGRQLAFGPHHLNRVDGQADLQTDLNASAASASNKLQLSIDGDGYSG 661 +GS+Q+PN++ATY +LA+G H ++ + GQAD+Q DLNA S SN+L +S+DG G Sbjct: 306 SGSLQKPNVQATYRAEKLAYGEHRVDSLSGQADVQADLNAKLNSGSNRLAVSLDGRGLHS 365 Query: 662 PDAALKQLKLSLSGTFGEHKLAVQADGRVRNQTLALQLNAHGKVTQDKNGYGWNGVIDKL 721 D AL +L L+LSGT+ H L + + G +R + L L + A G++++ K GYGW G + +L Sbjct: 366 SDMALDKLSLNLSGTYAAHTLKLDSSGTLRGKPLHLTMAAQGQLSESKTGYGWQGQVSEL 425 Query: 722 DNQGLPRIALAAPLSLALAADTLVAGATRLNVDRMAIDLRSLSYQQGRIRSEGSAKTLDV 781 NQG PRI+LAAPL+++ A LV GATRL+V IDL++ SY G+IRS G+ L+V Sbjct: 426 QNQGTPRISLAAPLAISADAGRLVLGATRLSVADAQIDLKNFSYDNGKIRSAGAINALNV 485 Query: 782 GRILELVREMSGASAAAPPAKTDLVLDADWNFSLAETVSGFFQVLRKSGDVSVNTGASQV 841 IL L E A P KTDLVLD+ W+FSLAET +G+ Q+ R+SGD+ VN G V Sbjct: 486 ATILGLAHEFG---APEIPLKTDLVLDSSWDFSLAETAAGYLQIARRSGDLRVNPGRGDV 542 Query: 842 ALGLSALQLRVDLAGHEAKFNGGVTASRIGTIEAQGQAGLLRQDGVLTLLPDSPLTAHAR 901 +LGLS L+LR DL + K + + ASRIGT+ AQ Q L T+ S L+ A+ Sbjct: 543 SLGLSELKLRADLQAGQVKLDSQLAASRIGTLSAQLQLALQHSGSSWTVSDSSALSGQAK 602 Query: 902 LNVPEVKTIGALLGPQYSLDGKLAMDINAAGTLAKPRLSGAINGDSLAVTLFDQGIQLKD 961 L VP++K++GAL+GPQ +LDG LA+D+N AG L KP LSG + GD LAVTLFDQGI+LKD Sbjct: 603 LQVPQLKSMGALIGPQVALDGSLALDLNLAGQLGKPMLSGKVAGDQLAVTLFDQGIKLKD 662 Query: 962 GTVRIVMDDNVIDLRQIEFHGGEGTLRATGKVKLGDADPDLNAAIVADRLQLFASPDRQL 1021 GT R+ + DNV+DL+Q+EFHGG+GT+RATG+++LG +PDL A++VAD LQLFASPDRQL Sbjct: 663 GTARLNLADNVVDLQQLEFHGGDGTIRATGRLQLGHDNPDLTASVVADHLQLFASPDRQL 722 Query: 1022 MLSGQAKLANVNEQLRIDGKFMVDKALFDLPKSSAPKLGDDVVIVRKDKDGKSRAKAGAA 1081 MLSGQAK+AN+ EQL +DGKF VDKALFDLPKSSAP LGDDVVIVRK+ K+RA Sbjct: 723 MLSGQAKIANLKEQLHVDGKFTVDKALFDLPKSSAPVLGDDVVIVRKET--KARA---TP 777 Query: 1082 ATSKEKLTAATEKPAGRFAPVMNIVVDLGNNFRFNGSGADLKLRGEMNVRSEPLLPLRAT 1141 T +EKL A +KPAG PVMN+ VD G++FRF GSGADL LRG M VRSEP PLRAT Sbjct: 778 LTEQEKLAKAAQKPAGGATPVMNVEVDFGSDFRFRGSGADLLLRGAMQVRSEPYQPLRAT 837 Query: 1142 GTVRVSEGTYEAFGTKLNIERGIINFQGPISNPNLNILAMRRNQDVEAGVEVTGNANQPR 1201 GT+RV+ G+YE FG KL IERG+INFQGPI NPN+NILAM+RNQ+VEAG E+TGN + R Sbjct: 838 GTIRVASGSYEVFGRKLAIERGLINFQGPIDNPNINILAMKRNQEVEAGAEITGNPSNLR 897 Query: 1202 VRLVSEPNVPDDEKLSWMMFGHGSDSSGLGQRSASSQALAFVGNYGGKKIAKDIGLDQFS 1261 V+LVSEPNV D+EKLSW+MFGHGSDSS LGQR A+ QALA +GNYGGKKIA+ IG D+FS Sbjct: 898 VKLVSEPNVSDEEKLSWLMFGHGSDSSALGQRQAAGQALALLGNYGGKKIAQGIGFDEFS 957 Query: 1262 IGASESGLSDEQVVNLGKSISEKLSLGYEQSLTGAASIAKATWQLSRRWSLVARTGTIFS 1321 IG+S+SG+ +EQVV+LGK I+EK++LGYEQSLT AASI K TWQ SRRWS+V R GTI Sbjct: 958 IGSSDSGIENEQVVSLGKVITEKINLGYEQSLTSAASILKLTWQFSRRWSMVMRGGTING 1017 Query: 1322 IWIFYS 1327 + + Y+ Sbjct: 1018 LEVLYN 1023 >ref|ZP_07676299.1| signal peptide protein [Ralstonia sp. 5_7_47FAA] gb|EFP65331.1| signal peptide protein [Ralstonia sp. 5_7_47FAA] Length = 1302 Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 589/1344 (43%), Positives = 819/1344 (60%), Gaps = 60/1344 (4%) Query: 1 MTAP-TATDHPEDQQAPEPRREGAGRRVLYVLLAVATLLL----ALAATLAWVVGTDSGT 55 MT P T +P + Q P+ G G R L L + LL ALA L W + + SGT Sbjct: 1 MTDPQTPESNPPEAQHPKRPTRGWGCRTLRWLGGLVAFLLVIVLALAGWLVWAIHSQSGT 60 Query: 56 RSAWRLAVWSMQGKLSGVHGGGSLADGVHLRNLRYRDAAMQLDIDRIDAAWDLSLRQRRL 115 W LA +SG GG++ DGV LR+L R + ++ ID ++ W ++ Sbjct: 61 AQLWALATRFGNAYVSGKLEGGTVRDGVSLRDLHVRAGSTEVRIDHVEGRWAITRGPWHA 120 Query: 116 TVSYLRVGTVD-INKQPLPPTPTIMPSSLSLPLALNLNDVSLQKLILQQGTSVTELSGLQ 174 +YLR G VD I P P+ P+SL LPLAL+++ +++ +L ++QGTS TEL + Sbjct: 121 HFAYLRAGNVDVILHPTPPIPPSGPPNSLVLPLALDVDRLAVDRLAIRQGTSTTELKSIA 180 Query: 175 LHGTSDGVQHTLVLDKLTTAFGQATALLHLNGKQPFALNGGVELAGLYQQDQQDQQEKSS 234 +DG H ++LD + T G+ A L + G +P+ L G LA ++ + Q Q S Sbjct: 181 GSLHTDGTHHNVLLDGMETPAGKLAATLRMTGTRPYPLTGAATLATQFEVNGQKQDASVS 240 Query: 235 EKFQLAAQLSGSLQELGIALTATGDKLNGKADIVATPFSTVPLKRAKVDLQHVNPQAFSN 294 AQLSGSL+ L I T TG KL +A I ATPF +PL RA V +HVNP+AF+ Sbjct: 241 ------AQLSGSLETLHIDATGTGAKLTAQALIDATPFGALPLSRAVVSAEHVNPRAFAP 294 Query: 295 GAPKADLQ-----RPVAGATAENLRVAGPVDIVNAIPGSLDQQRLPLTSIKARVDLGVDS 349 GAP+A L RP A+ L VAGP++I NA PG+LD+Q+LPL S++A+V L + Sbjct: 295 GAPEASLSIHADLRP--DEKAKTLTVAGPIEIDNAQPGTLDKQKLPLQSLRAQVRLNEND 352 Query: 350 QQLDDLRIALLKNATLTGKGQFHPADKAGRFDFDVAGLDLQAIHSELKPTRLAGPLNVVL 409 QQL L + LL A LTG A R D V LDLQA+H+ L+ T+LAGP+ V Sbjct: 353 QQLTGLDVRLLGGAVLTGGADVQKGHGALRVD--VRQLDLQALHASLERTKLAGPITVDF 410 Query: 410 KPGGQDIMLKLQDAQYSIQANAAVTPEQVTLKQVLLTAQKARLELAGTLGTVGAMEYAFK 469 G Q + L L QA A + QV ++ ++ ++RL LAGTL A +AFK Sbjct: 411 AGGTQRVALDLAGGDMRAQAKAVLDAAQVAVESAQVSLGRSRLTLAGTLKHDDAQSFAFK 470 Query: 470 GKLANFDPSLWMKTGKAPANAKAGTAAHAISARINMDFDTAGSLSPELQARLNFIIHDSS 529 G LA FDPS K K RIN +FD G+L + A + F + DS+ Sbjct: 471 GNLAEFDPSRLAKVAKG---------------RINAEFDARGTLGEPIDAAVKFAVRDSN 515 Query: 530 YDQLPMSGSGKLQLAGKRLLPSSLDMLVAGNQLQLKGAFGAPSDKLDIHIDAPQLARLGF 589 Y LPM+G G + L G+RLLPS + VAGN+ L+G+FG +D++ + IDAPQLARL Sbjct: 516 YAGLPMTGDGNVHLRGERLLPSDARLDVAGNKASLRGSFGGAADRMHVDIDAPQLARLQL 575 Query: 590 GVAGMLKLDGQLTGSMQRPNLRATYSGRQLAFGPHHLNRVDGQADLQTDLNASAASASNK 649 GV+G L L G ++G+++RP + AT+ QLA+ + ++ +G+A ++ ++ Sbjct: 576 GVSGALILSGDVSGTIKRPQVDATFRANQLAYQGNKIDTANGRAQIRDGIDG-------P 628 Query: 650 LQLSIDGDGYSGPDAALKQLKLSLSGTFGEHKLAVQADGRVRNQTLALQLNAHGKVTQDK 709 L + +GP +L+++ +L GT H+ ADG VRNQ L G +T K Sbjct: 629 LLFELTAQRVTGPSLSLREIHATLEGTRRAHRFRADADGNVRNQPFKFALAGDGALTPGK 688 Query: 710 NGYGWNGVIDKLDNQGLPRIALAAPLSLALAADTLVAGATRLNVDRMAIDLRSLSYQQGR 769 +G GW+G I L QG P + L AP+ L++A L+ G L +D+ I + + QG Sbjct: 689 DGDGWDGTISTLSAQGAPNLQLTAPVRLSVAPGRLMMGRADLTLDQTPIHIERIESTQGH 748 Query: 770 IRSEGSAKTLDVGRILELVREMSGASAAAPPAKTDLVLDADWNFSLAETVSGFFQVLRKS 829 +RS G L + R+LELVR +G APP +TDLV+D W+ L T +G ++ R+S Sbjct: 749 VRSAGRVDGLQIARVLELVRTWTGQ---APPVRTDLVIDGQWDLDLGSTATGAARIARRS 805 Query: 830 GDVSVNTGASQVALGLSALQLRVDLAGHEAKFNGGVTASRIGTIEAQGQAGLLRQDGVLT 889 GD+S+N G LGL+ + G G V ++R+G + GL+R G T Sbjct: 806 GDLSINAGRGFTPLGLTEATVEAHGEGMRLGLRGNVQSTRVGNLYLDAGVGLVRDPGPGT 865 Query: 890 LL---PDSPLTAHARLNVPEVKTIGALLGPQYSLDGKLAMDINAAGTLAKPRLSGAINGD 946 L P SPL+ +++P +K+IG LLGP + DG+LA + AGT+ P++SG + G Sbjct: 866 LALMAPTSPLSGGLTISLPHLKSIGDLLGPDVATDGQLAASLTFAGTVGAPKVSGFLTGQ 925 Query: 947 SLAVTLFDQGIQLKDGTVRIVMDDNVIDLRQIEFHGGEGTLRATGKVKLGDADPDLNAAI 1006 + V L+DQGI+L G VR+ +D NV+DL+++ FHGG+GTLRA G+V+LG+A+P+L I Sbjct: 926 DVDVALYDQGIRLTKGVVRVALDQNVVDLQEVVFHGGDGTLRAQGRVQLGEANPNLAGTI 985 Query: 1007 VADRLQLFASPDRQLMLSGQAKLANVNEQLRIDGKFMVDKALFDLPKSSAPKLGDDVVIV 1066 VAD+LQLFA PDR L+LSGQA++AN N+++ I GKF VD+ LFDLPK AP LGDDVVIV Sbjct: 986 VADKLQLFADPDRTLVLSGQARIANDNDRVAITGKFKVDRGLFDLPKDGAPSLGDDVVIV 1045 Query: 1067 RKDKDGKSRAKAGAAATSKEKLTAATEKPAGRFAPVMNIVVDLGNNFRFNGSGADLKLRG 1126 R +A AA E+ EKPAGRF+PV+++ VD G+NFRF G+GADL L G Sbjct: 1046 R---------RADAARNQAERGVKREEKPAGRFSPVVDVDVDFGDNFRFKGAGADLSLGG 1096 Query: 1127 EMNVRSEPLLPLRATGTVRVSEG-TYEAFGTKLNIERGIINFQGPISNPNLNILAMRRNQ 1185 +M+V SEPL+PLR TGT+ V +G TYEAFG KL IE+G++NF GPI+NP+ NI AMRRNQ Sbjct: 1097 QMHVHSEPLVPLRGTGTIYVRQGSTYEAFGRKLAIEQGVLNFVGPINNPSFNITAMRRNQ 1156 Query: 1186 DVEAGVEVTGNANQPRVRLVSEPNVPDDEKLSWMMFGHGSDSSGLGQRSA-SSQALAFVG 1244 +VEAGV+VTG QPRV+LVSEPNVPD++KLSW+MFG+ + ++GLGQ+ A S AL +G Sbjct: 1157 EVEAGVQVTGTVRQPRVKLVSEPNVPDEDKLSWLMFGYSASNAGLGQQQAMSGAALGLLG 1216 Query: 1245 NYGGKKIAKDIGLDQFSIGASESGLSDEQVVNLGKSISEKLSLGYEQSLTGAASIAKATW 1304 N GK +A+ GLD+FSIG S +GL+D QVV+LGK ISE++++GYEQSL+ A SI K TW Sbjct: 1217 NVAGKNVARRFGLDEFSIGPSAAGLTDPQVVSLGKVISERITVGYEQSLSTADSIVKLTW 1276 Query: 1305 QLSRRWSLVARTGTIFSIWIFYSQ 1328 Q SRRWS+VAR GTI + +++ Sbjct: 1277 QFSRRWSVVARGGTINGASVLFNK 1300 >ref|YP_001900155.1| hypothetical protein Rpic_2596 [Ralstonia pickettii 12J] gb|ACD27723.1| protein of unknown function DUF490 [Ralstonia pickettii 12J] Length = 1304 Score = 1032 bits (2668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 589/1344 (43%), Positives = 819/1344 (60%), Gaps = 60/1344 (4%) Query: 1 MTAP-TATDHPEDQQAPEPRREGAGRRVLYVLLAVATLLL----ALAATLAWVVGTDSGT 55 MT P T +P + Q P+ G G R L L + LL ALA L W + + SGT Sbjct: 3 MTDPQTPESNPPEAQHPKRPTRGWGCRTLRWLGGLVAFLLVIVLALAGWLVWAIHSQSGT 62 Query: 56 RSAWRLAVWSMQGKLSGVHGGGSLADGVHLRNLRYRDAAMQLDIDRIDAAWDLSLRQRRL 115 W LA +SG GG++ DGV LR+L R + ++ ID ++ W ++ Sbjct: 63 AQLWALATRFGNAYVSGKLEGGTVRDGVSLRDLHVRAGSTEVRIDHVEGRWAITRGPWHA 122 Query: 116 TVSYLRVGTVD-INKQPLPPTPTIMPSSLSLPLALNLNDVSLQKLILQQGTSVTELSGLQ 174 +YLR G VD I P P+ P+SL LPLAL+++ +++ +L ++QGTS TEL + Sbjct: 123 HFAYLRAGNVDVILHPTPPIPPSGPPNSLVLPLALDVDRLAVDRLAIRQGTSTTELKSIA 182 Query: 175 LHGTSDGVQHTLVLDKLTTAFGQATALLHLNGKQPFALNGGVELAGLYQQDQQDQQEKSS 234 +DG H ++LD + T G+ A L + G +P+ L G LA ++ + Q Q S Sbjct: 183 GSLHTDGTHHNVLLDGMETPAGKLAATLRMTGTRPYPLTGAATLATQFEVNGQKQDASVS 242 Query: 235 EKFQLAAQLSGSLQELGIALTATGDKLNGKADIVATPFSTVPLKRAKVDLQHVNPQAFSN 294 AQLSGSL+ L I T TG KL +A I ATPF +PL RA V +HVNP+AF+ Sbjct: 243 ------AQLSGSLETLHIDATGTGAKLTAQALIDATPFGALPLSRAVVSAEHVNPRAFAP 296 Query: 295 GAPKADLQ-----RPVAGATAENLRVAGPVDIVNAIPGSLDQQRLPLTSIKARVDLGVDS 349 GAP+A L RP A+ L VAGP++I NA PG+LD+Q+LPL S++A+V L + Sbjct: 297 GAPEASLSIHADLRP--DEKAKTLTVAGPIEIDNAQPGTLDKQKLPLQSLRAQVRLNEND 354 Query: 350 QQLDDLRIALLKNATLTGKGQFHPADKAGRFDFDVAGLDLQAIHSELKPTRLAGPLNVVL 409 QQL L + LL A LTG A R D V LDLQA+H+ L+ T+LAGP+ V Sbjct: 355 QQLTGLDVRLLGGAVLTGGADVQKGHGALRVD--VRQLDLQALHASLERTKLAGPITVDF 412 Query: 410 KPGGQDIMLKLQDAQYSIQANAAVTPEQVTLKQVLLTAQKARLELAGTLGTVGAMEYAFK 469 G Q + L L QA A + QV ++ ++ ++RL LAGTL A +AFK Sbjct: 413 AGGTQRVALDLAGGDMRAQAKAVLDAAQVAVESAQVSLGRSRLTLAGTLKHDDAQSFAFK 472 Query: 470 GKLANFDPSLWMKTGKAPANAKAGTAAHAISARINMDFDTAGSLSPELQARLNFIIHDSS 529 G LA FDPS K K RIN +FD G+L + A + F + DS+ Sbjct: 473 GNLAEFDPSRLAKVAKG---------------RINAEFDARGTLGEPIDAAVKFAVRDSN 517 Query: 530 YDQLPMSGSGKLQLAGKRLLPSSLDMLVAGNQLQLKGAFGAPSDKLDIHIDAPQLARLGF 589 Y LPM+G G + L G+RLLPS + VAGN+ L+G+FG +D++ + IDAPQLARL Sbjct: 518 YAGLPMTGDGNVHLRGERLLPSDARLDVAGNKASLRGSFGGAADRMHVDIDAPQLARLQL 577 Query: 590 GVAGMLKLDGQLTGSMQRPNLRATYSGRQLAFGPHHLNRVDGQADLQTDLNASAASASNK 649 GV+G L L G ++G+++RP + AT+ QLA+ + ++ +G+A ++ ++ Sbjct: 578 GVSGALILSGDVSGTIKRPQVDATFRANQLAYQGNKIDTANGRAQIRDGIDG-------P 630 Query: 650 LQLSIDGDGYSGPDAALKQLKLSLSGTFGEHKLAVQADGRVRNQTLALQLNAHGKVTQDK 709 L + +GP +L+++ +L GT H+ ADG VRNQ L G +T K Sbjct: 631 LLFELTAQRVTGPSLSLREIHATLEGTRRAHRFRADADGNVRNQPFKFALAGDGALTPGK 690 Query: 710 NGYGWNGVIDKLDNQGLPRIALAAPLSLALAADTLVAGATRLNVDRMAIDLRSLSYQQGR 769 +G GW+G I L QG P + L AP+ L++A L+ G L +D+ I + + QG Sbjct: 691 DGDGWDGTISTLSAQGAPNLQLTAPVRLSVAPGRLMMGRADLTLDQTPIHIERIESTQGH 750 Query: 770 IRSEGSAKTLDVGRILELVREMSGASAAAPPAKTDLVLDADWNFSLAETVSGFFQVLRKS 829 +RS G L + R+LELVR +G APP +TDLV+D W+ L T +G ++ R+S Sbjct: 751 VRSAGRVDGLQIARVLELVRTWTGQ---APPVRTDLVIDGQWDLDLGSTATGAARIARRS 807 Query: 830 GDVSVNTGASQVALGLSALQLRVDLAGHEAKFNGGVTASRIGTIEAQGQAGLLRQDGVLT 889 GD+S+N G LGL+ + G G V ++R+G + GL+R G T Sbjct: 808 GDLSINAGRGFTPLGLTEATVEAHGEGMRLGLRGNVQSTRVGNLYLDAGVGLVRDPGPGT 867 Query: 890 LL---PDSPLTAHARLNVPEVKTIGALLGPQYSLDGKLAMDINAAGTLAKPRLSGAINGD 946 L P SPL+ +++P +K+IG LLGP + DG+LA + AGT+ P++SG + G Sbjct: 868 LALMAPTSPLSGGLTISLPHLKSIGDLLGPDVATDGQLAASLTFAGTVGAPKVSGFLTGQ 927 Query: 947 SLAVTLFDQGIQLKDGTVRIVMDDNVIDLRQIEFHGGEGTLRATGKVKLGDADPDLNAAI 1006 + V L+DQGI+L G VR+ +D NV+DL+++ FHGG+GTLRA G+V+LG+A+P+L I Sbjct: 928 DVDVALYDQGIRLTKGVVRVALDQNVVDLQEVVFHGGDGTLRAQGRVQLGEANPNLAGTI 987 Query: 1007 VADRLQLFASPDRQLMLSGQAKLANVNEQLRIDGKFMVDKALFDLPKSSAPKLGDDVVIV 1066 VAD+LQLFA PDR L+LSGQA++AN N+++ I GKF VD+ LFDLPK AP LGDDVVIV Sbjct: 988 VADKLQLFADPDRTLVLSGQARIANDNDRVAITGKFKVDRGLFDLPKDGAPSLGDDVVIV 1047 Query: 1067 RKDKDGKSRAKAGAAATSKEKLTAATEKPAGRFAPVMNIVVDLGNNFRFNGSGADLKLRG 1126 R +A AA E+ EKPAGRF+PV+++ VD G+NFRF G+GADL L G Sbjct: 1048 R---------RADAARNQAERGVKREEKPAGRFSPVVDVDVDFGDNFRFKGAGADLSLGG 1098 Query: 1127 EMNVRSEPLLPLRATGTVRVSEG-TYEAFGTKLNIERGIINFQGPISNPNLNILAMRRNQ 1185 +M+V SEPL+PLR TGT+ V +G TYEAFG KL IE+G++NF GPI+NP+ NI AMRRNQ Sbjct: 1099 QMHVHSEPLVPLRGTGTIYVRQGSTYEAFGRKLAIEQGVLNFVGPINNPSFNITAMRRNQ 1158 Query: 1186 DVEAGVEVTGNANQPRVRLVSEPNVPDDEKLSWMMFGHGSDSSGLGQRSA-SSQALAFVG 1244 +VEAGV+VTG QPRV+LVSEPNVPD++KLSW+MFG+ + ++GLGQ+ A S AL +G Sbjct: 1159 EVEAGVQVTGTVRQPRVKLVSEPNVPDEDKLSWLMFGYSASNAGLGQQQAMSGAALGLLG 1218 Query: 1245 NYGGKKIAKDIGLDQFSIGASESGLSDEQVVNLGKSISEKLSLGYEQSLTGAASIAKATW 1304 N GK +A+ GLD+FSIG S +GL+D QVV+LGK ISE++++GYEQSL+ A SI K TW Sbjct: 1219 NVAGKNVARRFGLDEFSIGPSAAGLTDPQVVSLGKVISERITVGYEQSLSTADSIVKLTW 1278 Query: 1305 QLSRRWSLVARTGTIFSIWIFYSQ 1328 Q SRRWS+VAR GTI + +++ Sbjct: 1279 QFSRRWSVVARGGTINGASVLFNK 1302 >ref|YP_003751741.1| hypothetical protein RPSI07_1085 [Ralstonia solanacearum PSI07] emb|CBJ50444.1| conserved protein of unknown function, DUF490 [Ralstonia solanacearum PSI07] Length = 1299 Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 584/1329 (43%), Positives = 820/1329 (61%), Gaps = 59/1329 (4%) Query: 15 APEPRREGAGRRVL-YVLLAVATLLLALAATLAWVVG---TDSGTRSAWRLAVWSMQGKL 70 AP P R G GRRVL + L+VA +LLA+ A W+V + +GT W LA + Sbjct: 13 APIPSRRGWGRRVLRWAGLSVALMLLAVVALCGWLVWALQSPTGTAQLWSLATRFGHAYV 72 Query: 71 SGVHGGGSLADGVHLRNLRYRDAAMQLDIDRIDAAWDLSLRQRRLTVSYLRVGTVDIN-K 129 SG GG+L DG+ LR+L+ R ++ ID ++ W ++ +YLR G V++ Sbjct: 73 SGKLAGGTLRDGLSLRDLQVRAGGTEVRIDHVEGRWAITRGPWHARFAYLRAGNVEVTLH 132 Query: 130 QPLPPTPTIMPSSLSLPLALNLNDVSLQKLILQQGTSVTELSGLQLHGTSDGVQHTLVLD 189 P P+ P+SL+LPLAL+++ +++ +L ++QGTS TEL L +DG H ++LD Sbjct: 133 PTPPTPPSGPPASLTLPLALDVDRLAVDRLAIRQGTSTTELKALAGSLHTDGTHHNVLLD 192 Query: 190 KLTTAFGQATALLHLNGKQPFALNGGVELAGLYQQDQQDQQEKSSEKFQLAAQLSGSLQE 249 + T G+ A L + G +P+ L G LA ++ Q Q+ S AQLSGSL+ Sbjct: 193 GVETPAGRLAATLRMTGTRPYPLTGAATLATQFEAGGQRQEASVS------AQLSGSLEA 246 Query: 250 LGIALTATGDKLNGKADIVATPFSTVPLKRAKVDLQHVNPQAFSNGAPKADLQ-----RP 304 L I T TG L +A I ATPF +P RA V + VNP+AF+ GAP+A L RP Sbjct: 247 LRIDATGTGASLTAQAQIDATPFGALPFTRAVVSAEQVNPRAFAPGAPEAALSVHADLRP 306 Query: 305 VAGATAENLRVAGPVDIVNAIPGSLDQQRLPLTSIKARVDLGVDSQQLDDLRIALLKNAT 364 A A L VAGPV I NA G LD+Q+LPL S++A+V L +QQL L + L A Sbjct: 307 --DAQARTLTVAGPVQIDNAQAGPLDRQKLPLQSLRAQVRLAEAAQQLTGLDVRLPGGAR 364 Query: 365 LTGKGQFHPADKAGRFDFDVAGLDLQAIHSELKPTRLAGPLNVVLKPGGQDIMLKLQDAQ 424 LTG G DV LDLQ++H L+ TRLAGP+ V + G Q + L L Sbjct: 365 LTGSADVQ--HGRGTLRVDVHQLDLQSLHGALEKTRLAGPVTVDFEGGTQRVALDLAGGD 422 Query: 425 YSIQANAAVTPEQVTLKQVLLTAQKARLELAGTLGTVGAMEYAFKGKLANFDPSLWMKTG 484 QA A + Q+ + ++ ++RL L+GTL A +AFKG LA+FDPS K Sbjct: 423 MRAQATAVLDAAQIAVDSAQVSLGRSRLTLSGTLKHDDAQSFAFKGNLADFDPSRLAKVA 482 Query: 485 KAPANAKAGTAAHAISARINMDFDTAGSLSPELQARLNFIIHDSSYDQLPMSGSGKLQLA 544 K RIN FDT G+L+ + A + F + +S Y LPM+G G + L Sbjct: 483 KG---------------RINAVFDTHGTLAEPIDAAIRFAVRNSEYAGLPMTGDGNVHLR 527 Query: 545 GKRLLPSSLDMLVAGNQLQLKGAFGAPSDKLDIHIDAPQLARLGFGVAGMLKLDGQLTGS 604 G+RLLPS + VAGN+ L+G+FGA D++ + IDAPQLARL GV+G L L G ++G+ Sbjct: 528 GQRLLPSDARLDVAGNRASLRGSFGAAGDRMHVDIDAPQLARLQLGVSGALSLSGDVSGT 587 Query: 605 MQRPNLRATYSGRQLAFGPHHLNRVDGQADLQTDLNASAASASNKLQLSIDGDGYSGPDA 664 ++RP + AT+ +QLA+G + ++ G+A L+ L+ LQ + + P+ Sbjct: 588 LKRPQVDATFRAQQLAYGGNRIDTASGRAQLRDGLD-------GPLQFELTAQRLTAPNV 640 Query: 665 ALKQLKLSLSGTFGEHKLAVQADGRVRNQTLALQLNAHGKVTQDKNGYGWNGVIDKLDNQ 724 +L++++ +L GT H+ ADG VRNQ L G +T K+G W G + L + Sbjct: 641 SLREVRATLDGTRRAHRFRADADGSVRNQPFKFALAGDGALTPGKDGDAWAGTLSTLSAR 700 Query: 725 GLPRIALAAPLSLALAADTLVAGATRLNVDRMAIDLRSLSYQQGRIRSEGSAKTLDVGRI 784 G P + L AP+ +++A G L +D+ I + + QG +RS G L V R+ Sbjct: 701 GAPDLQLTAPVRVSVAPGRFAVGRADLTLDQTPIRIERVESNQGHLRSAGRIDGLAVARV 760 Query: 785 LELVREMSGASAAAPPAKTDLVLDADWNFSLAETVSGFFQVLRKSGDVSVNTGASQVALG 844 LELVR +G APP +TDLV+D W+ L T +G ++ R+SGD+S+N G LG Sbjct: 761 LELVRVWTGQ---APPVRTDLVIDGQWDLDLGSTATGTARIARRSGDLSINAGRGFTPLG 817 Query: 845 LSALQLRVDLAGHEAKFNGGVTASRIGTIEAQGQAGLLRQ--DGVLTLL-PDSPLTAHAR 901 L+ + G G V ++R+G I GL R+ G L L+ P SPL+ Sbjct: 818 LTDAVVEARGEGMRLGLRGDVQSTRVGRIHLDAGIGLAREAAPGALALMSPASPLSGALT 877 Query: 902 LNVPEVKTIGALLGPQYSLDGKLAMDINAAGTLAKPRLSGAINGDSLAVTLFDQGIQLKD 961 +++P++K IG LLGP +LDG+LA ++ AGT+ P++SG ++G + V L+DQGI+L D Sbjct: 878 VDLPQLKAIGDLLGPDVALDGRLAANLTFAGTVGAPKVSGLLDGQGIDVALYDQGIRLTD 937 Query: 962 GTVRIVMDDNVIDLRQIEFHGGEGTLRATGKVKLGDADPDLNAAIVADRLQLFASPDRQL 1021 GTV + +D NV+DL+++ FHGG+GT+RA G+V+LG+A+P+L +VAD+LQLFA PDR L Sbjct: 938 GTVHVGLDQNVVDLKEVVFHGGDGTVRAQGRVQLGEANPNLAGTLVADKLQLFADPDRTL 997 Query: 1022 MLSGQAKLANVNEQLRIDGKFMVDKALFDLPKSSAPKLGDDVVIVRKDKDGKSRAKAGAA 1081 +LSGQA++AN ++++ I GKF VD+ LF+LPK AP LGDDVVIVR +A AA Sbjct: 998 VLSGQARIANESDRVAITGKFRVDRGLFNLPKDGAPSLGDDVVIVR---------RADAA 1048 Query: 1082 ATSKEKLTAATEKPAGRFAPVMNIVVDLGNNFRFNGSGADLKLRGEMNVRSEPLLPLRAT 1141 E+ T EKPAGRF+PV+++ VD G+NFRF G+GADL L G+M+V SEPL+PLR T Sbjct: 1049 RNQAERGTPREEKPAGRFSPVVSVDVDFGDNFRFKGAGADLALGGQMHVHSEPLVPLRGT 1108 Query: 1142 GTVRVSEG-TYEAFGTKLNIERGIINFQGPISNPNLNILAMRRNQDVEAGVEVTGNANQP 1200 G++ V +G TYEAFG KL IE+GI+NF GPI+NP+LNILAMRRNQ+VEAGV+VTG QP Sbjct: 1109 GSIYVRQGSTYEAFGRKLAIEQGILNFTGPINNPSLNILAMRRNQEVEAGVQVTGTVRQP 1168 Query: 1201 RVRLVSEPNVPDDEKLSWMMFGHGSDSSGLGQRSA-SSQALAFVGNYGGKKIAKDIGLDQ 1259 RV+LVSEPNV D++KLSW+MFG+ + ++GLGQ+ A S AL +GN GK +A+ GLD+ Sbjct: 1169 RVKLVSEPNVADEDKLSWLMFGYSASNAGLGQQQAMSGAALGLLGNVAGKNVARRFGLDE 1228 Query: 1260 FSIGASESGLSDEQVVNLGKSISEKLSLGYEQSLTGAASIAKATWQLSRRWSLVARTGTI 1319 FSIG S SGL+D QVV++GK+ISE++++GYEQSL+ A SI K TWQLSRRWS+VAR GTI Sbjct: 1229 FSIGPSTSGLTDPQVVSVGKAISERIAVGYEQSLSTADSIVKFTWQLSRRWSVVARGGTI 1288 Query: 1320 FSIWIFYSQ 1328 I +++ Sbjct: 1289 NGASILFNK 1297