BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0127.p (184 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02380754.1| Fimbrial protein [Burkholderia ubonensis Bu] 132 2e-29 ref|ZP_03574928.1| fimbrial protein [Burkholderia multivorans CG... 124 4e-27 ref|ZP_03587671.1| fimbrial protein [Burkholderia multivorans CG... 122 2e-26 gb|EGD04376.1| fimbrial protein [Burkholderia sp. TJI49] 121 5e-26 ref|YP_004362456.1| fimbrial protein [Burkholderia gladioli BSR3... 120 8e-26 >ref|ZP_02380754.1| Fimbrial protein [Burkholderia ubonensis Bu] Length = 175 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/184 (46%), Positives = 106/184 (57%), Gaps = 14/184 (7%) Query: 2 KKIILSSLLAVAAAPAVSQAADGTITFNGTITAQTCTI--NGGTPSFAVNMPRVPTTALA 59 +KI + + A A P + A+DGTITFNG I AQTCTI NGG V +P V + L+ Sbjct: 3 QKIAFAMISAALALPMAAHASDGTITFNGAIEAQTCTISVNGGNQDATVQLPTVAASTLS 62 Query: 60 AAGQTAGVVNDSIRITLTGCSQNGASPAANGAVRAFFEGGPTVDATTRRLRNSTGTATNV 119 G TAG N I L+ C+ VR+FFE GP VD + LRN+ G A NV Sbjct: 63 TKGNTAGATN--FTIALSDCAGKATQ------VRSFFEAGPNVDTASGNLRNN-GAAGNV 113 Query: 120 QVGLINQDGTDVAVGAASQNTQYVPLAGAAGSGAATLVYGSKYVATGAATAGTVITSVQY 179 QV L+N DG + G SQ + A A GAATLVYG++Y ATG ATAG V TSV Y Sbjct: 114 QVQLLNSDGVVLQAGNESQRSN---AASALTDGAATLVYGAQYYATGQATAGDVQTSVTY 170 Query: 180 SLDF 183 S+D+ Sbjct: 171 SIDY 174 >ref|ZP_03574928.1| fimbrial protein [Burkholderia multivorans CGD2M] ref|ZP_03580611.1| fimbrial protein [Burkholderia multivorans CGD2] gb|EEE04888.1| fimbrial protein [Burkholderia multivorans CGD2] gb|EEE10721.1| fimbrial protein [Burkholderia multivorans CGD2M] Length = 179 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 86/190 (45%), Positives = 117/190 (61%), Gaps = 20/190 (10%) Query: 3 KIILSSLLAVAA----APAVSQAADGTITFNGTITAQTCTING---GTPSFAVNMPRVPT 55 K L SL+AVAA AP+VS AA+G ITF GTI AQTC I+G G P+F V +P V Sbjct: 2 KATLRSLVAVAAFASLAPSVSHAANGEITFTGTIKAQTCKISGNNSGNPNFTVALPPVSI 61 Query: 56 TALAAAGQTAGVVNDSIRITLTGCSQNGASPAANGAVRAFFEGGPTVDATTRRLRNSTGT 115 TAL G++AG I+LT CS A G V FE G T++ + L N+ GT Sbjct: 62 TALDQGGKSAG--RTPFTISLTNCSP------ATGNVYTHFEPGDTINTASGNLINAEGT 113 Query: 116 ATNVQVGLINQDGTDVAVGAASQNTQYVPLAGAAGSGAATLVYGSKYVAT-GAATAGTVI 174 AT ++V ++N D + + +G+A++N++ V L +GAATL Y ++YVA G ATAG+V Sbjct: 114 ATPIEVNVLNADTSIIKLGSANENSKPVALQ----NGAATLAYFAQYVAVGGPATAGSVK 169 Query: 175 TSVQYSLDFQ 184 TSV YS+ +Q Sbjct: 170 TSVMYSIAYQ 179 >ref|ZP_03587671.1| fimbrial protein [Burkholderia multivorans CGD1] gb|EED98067.1| fimbrial protein [Burkholderia multivorans CGD1] Length = 180 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 88/191 (46%), Positives = 116/191 (60%), Gaps = 21/191 (10%) Query: 3 KIILSSLLAVAA----APAVSQAADGTITFNGTITAQTCTING---GTPSFAVNMPRVPT 55 K L SL+AVAA AP+VS AADG ITF GT+ AQTC ING G +F V +P V Sbjct: 2 KATLRSLVAVAAFASLAPSVSHAADGQITFTGTVKAQTCQINGNNSGGKNFTVTLPPVSI 61 Query: 56 TALAAAGQTAGVVNDSIRITLTGCSQNGASPAANGAVRAFFEGGPTVDATTRRLRNSTGT 115 T+LA G TAG + I+LT CS A G V FE T++ + L N GT Sbjct: 62 TSLAQGGTTAG--RTAFTISLTNCS------PATGNVYTHFEPSDTINTASGNLINKEGT 113 Query: 116 ATNVQVGLINQ-DGTDVAVGAASQNTQYVPLAGAAGSGAATLVYGSKYVATGA-ATAGTV 173 A+NV+VG++N D + + +G+A++N++ V L +GAATL Y ++YVA G ATAGTV Sbjct: 114 ASNVEVGVLNNPDTSTIKLGSANENSKPVAL----DNGAATLAYYAQYVAMGGPATAGTV 169 Query: 174 ITSVQYSLDFQ 184 TS YS+ +Q Sbjct: 170 KTSALYSIIYQ 180 >gb|EGD04376.1| fimbrial protein [Burkholderia sp. TJI49] Length = 180 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 87/191 (45%), Positives = 117/191 (61%), Gaps = 21/191 (10%) Query: 3 KIILSSLLAVAA----APAVSQAADGTITFNGTITAQTCTING---GTPSFAVNMPRVPT 55 K L +L+AVAA AP+VS A DG ITF GTI AQTC ING G+ +F V +P V Sbjct: 2 KATLRTLVAVAAFASLAPSVSHATDGQITFTGTIKAQTCQINGNGTGSKNFTVALPPVSI 61 Query: 56 TALAAAGQTAGVVNDSIRITLTGCSQNGASPAANGAVRAFFEGGPTVDATTRRLRNSTGT 115 T+LA G TAG + I+LT CS A G V FE T++ + L N+ GT Sbjct: 62 TSLAQGGTTAG--RTAFTISLTNCS------PATGNVYTHFEPSDTINTASGNLLNTEGT 113 Query: 116 ATNVQVGLINQ-DGTDVAVGAASQNTQYVPLAGAAGSGAATLVYGSKYVATGA-ATAGTV 173 A+NV+VG++N D + + +G+A++N++ V L +GAATL Y ++YVA G ATAGTV Sbjct: 114 ASNVEVGVLNNPDTSIIKLGSANENSKPVALE----NGAATLAYYAQYVAMGGPATAGTV 169 Query: 174 ITSVQYSLDFQ 184 TS YS+ +Q Sbjct: 170 KTSALYSIVYQ 180 >ref|YP_004362456.1| fimbrial protein [Burkholderia gladioli BSR3] gb|AEA65426.1| fimbrial protein [Burkholderia gladioli BSR3] Length = 179 Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 85/165 (51%), Positives = 113/165 (68%), Gaps = 15/165 (9%) Query: 21 AADGTITFNGTITAQTCTINGGTPSFAVNMPRVPTTALAAAGQTAGVVNDSIRITLTGCS 80 AADGTITF G+++AQTCTIN GT F V +P V ALA+AGQTAG S I LTGCS Sbjct: 23 AADGTITFTGSVSAQTCTINSGTKDFTVTLPTVSANALASAGQTAG--RASFNIALTGCS 80 Query: 81 QNGASPAANGAVRAFFEGGPTVDATTRRLRNSTG--TATNVQVGLINQDGTDVAVGA--A 136 A +G V AFFE G TVD++T +L +G +ATNV++GL+N D + + +GA A Sbjct: 81 ------AKSGTVHAFFEPGSTVDSSTGQLIVQSGKDSATNVEIGLLNDDLSVIQIGAADA 134 Query: 137 SQNTQYVPLAGAAGSGAATLVYGSKYVATGAATAGTVITSVQYSL 181 SQN++ V + + +G ATL + ++Y+ATGAATAGT +SV Y+L Sbjct: 135 SQNSKPVTI---SATGDATLKFYAQYIATGAATAGTAKSSVMYTL 176