BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0119.p         (122 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777510.1| 3-hydroxyacyl-CoA dehydrogenase [Herbaspiril...   171   4e-41
ref|ZP_02376706.1| 3-hydroxybutyryl-CoA dehydrogenase [Burkholde...   168   3e-40
ref|ZP_04947471.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia...   167   4e-40
ref|YP_001117485.1| 3-hydroxybutyryl-CoA dehydrogenase [Burkhold...   164   4e-39
ref|YP_372075.1| 3-hydroxybutyryl-CoA dehydrogenase [Burkholderi...   163   7e-39

>ref|YP_003777510.1| 3-hydroxyacyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1]
 gb|ADJ65602.1| 3-hydroxyacyl-CoA dehydrogenase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 512

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 79/121 (65%), Positives = 93/121 (76%)

Query: 1   VTRADQCSDAAYFSIVALLQAAGFAVSRLDDVPGMAVMRTVAMLANEAADTVNQGVCSAA 60
           + +ADQC    Y  +  +LQA G  +S + DVPGM VMRTV ML NEAAD VNQGVC+AA
Sbjct: 391 LAKADQCRPQRYAEVAGVLQACGLDLSPMQDVPGMMVMRTVCMLVNEAADAVNQGVCNAA 450

Query: 61  DADMAMQKGVNYPRGPLAWADAIGLDTVAEVLSHLAAAYGEDRYRVSPLIMRKTASKGQF 120
           DADMAM+KGVNYPRGPLAWA+ IG+DTV +VL HL A YGEDRYR+SPL+ R  AS  +F
Sbjct: 451 DADMAMRKGVNYPRGPLAWANEIGIDTVNQVLHHLCATYGEDRYRISPLLQRLYASGRKF 510

Query: 121 H 121
           H
Sbjct: 511 H 511


>ref|ZP_02376706.1| 3-hydroxybutyryl-CoA dehydrogenase [Burkholderia ubonensis Bu]
          Length = 518

 Score =  168 bits (425), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 84/108 (77%), Positives = 89/108 (82%)

Query: 1   VTRADQCSDAAYFSIVALLQAAGFAVSRLDDVPGMAVMRTVAMLANEAADTVNQGVCSAA 60
           +TRA QCSDAAY   V L Q AGF V  L DVPGM VMRTVAMLANEAADTVNQGVCS A
Sbjct: 397 LTRALQCSDAAYADAVGLFQQAGFRVVGLADVPGMIVMRTVAMLANEAADTVNQGVCSPA 456

Query: 61  DADMAMQKGVNYPRGPLAWADAIGLDTVAEVLSHLAAAYGEDRYRVSP 108
           D D+AM+KGVNYP GPLAWADAIG+  V  VLSHLAA+YGEDRYRVSP
Sbjct: 457 DLDLAMEKGVNYPSGPLAWADAIGIARVHRVLSHLAASYGEDRYRVSP 504


>ref|ZP_04947471.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
 gb|EAY70642.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
          Length = 518

 Score =  167 bits (424), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 95/122 (77%)

Query: 1   VTRADQCSDAAYFSIVALLQAAGFAVSRLDDVPGMAVMRTVAMLANEAADTVNQGVCSAA 60
           +TRA QCSDAAY   V L Q AGF V R+ DVPGM  MRTVAMLANEAADTVNQGVCS A
Sbjct: 397 LTRALQCSDAAYADAVGLFQQAGFRVVRIGDVPGMIAMRTVAMLANEAADTVNQGVCSPA 456

Query: 61  DADMAMQKGVNYPRGPLAWADAIGLDTVAEVLSHLAAAYGEDRYRVSPLIMRKTASKGQF 120
           D D+AM+KGVNYP GPLAWADAIG+  V  VLS+LAA+YGEDRYRVSP I+   A+   F
Sbjct: 457 DLDLAMEKGVNYPCGPLAWADAIGIGRVHRVLSNLAASYGEDRYRVSPRIVALHAAGRTF 516

Query: 121 HA 122
            +
Sbjct: 517 RS 518


>ref|YP_001117485.1| 3-hydroxybutyryl-CoA dehydrogenase [Burkholderia vietnamiensis G4]
 gb|ABO58020.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia vietnamiensis G4]
          Length = 517

 Score =  164 bits (415), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/110 (73%), Positives = 87/110 (79%)

Query: 1   VTRADQCSDAAYFSIVALLQAAGFAVSRLDDVPGMAVMRTVAMLANEAADTVNQGVCSAA 60
           +TRA QCSDAAY   V L Q AGF V  + DVPGM  MRTVAMLANEAADTVNQGVCS A
Sbjct: 397 LTRALQCSDAAYADAVGLFQQAGFRVVGVGDVPGMVAMRTVAMLANEAADTVNQGVCSPA 456

Query: 61  DADMAMQKGVNYPRGPLAWADAIGLDTVAEVLSHLAAAYGEDRYRVSPLI 110
           D D+AM+KGVNYP GPL WADAIG+  V  VLSHLA +YGEDRYRVSP I
Sbjct: 457 DLDLAMEKGVNYPCGPLTWADAIGIGRVHRVLSHLATSYGEDRYRVSPRI 506


>ref|YP_372075.1| 3-hydroxybutyryl-CoA dehydrogenase [Burkholderia sp. 383]
 gb|ABB11431.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. 383]
          Length = 518

 Score =  163 bits (413), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 82/110 (74%), Positives = 89/110 (80%)

Query: 1   VTRADQCSDAAYFSIVALLQAAGFAVSRLDDVPGMAVMRTVAMLANEAADTVNQGVCSAA 60
           +TRA QCSDAAY   V   Q AGF V  + DVPGM  MRTVAMLANEAADTVNQGVCS A
Sbjct: 397 LTRALQCSDAAYADAVGQFQQAGFRVVGVADVPGMVAMRTVAMLANEAADTVNQGVCSPA 456

Query: 61  DADMAMQKGVNYPRGPLAWADAIGLDTVAEVLSHLAAAYGEDRYRVSPLI 110
           D D+AM+KGVNYP GPLAWADAIG+  V  VLS+LAA+YGEDRYRVSPLI
Sbjct: 457 DLDLAMEKGVNYPCGPLAWADAIGIGRVHRVLSNLAASYGEDRYRVSPLI 506