BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0081.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003524852.1| NmrA family protein [Sideroxydans lithotroph... 377 e-103 ref|YP_001006020.1| hypothetical protein YE1738 [Yersinia entero... 368 e-100 ref|ZP_04641566.1| Uncharacterized oxidoreductase ytfG [Yersinia... 366 3e-99 ref|ZP_04611124.1| Uncharacterized oxidoreductase ytfG [Yersinia... 365 3e-99 ref|ZP_04635455.1| Uncharacterized oxidoreductase ytfG [Yersinia... 363 2e-98 >ref|YP_003524852.1| NmrA family protein [Sideroxydans lithotrophicus ES-1] gb|ADE12465.1| NmrA family protein [Sideroxydans lithotrophicus ES-1] Length = 282 Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust. Identities = 195/282 (69%), Positives = 228/282 (80%) Query: 1 MIVVTGATGQLGRLVIAALLKTVPAANIVAAVRSPEKAADLAALGVQVRRADYTDAASLD 60 MIVVTGATGQLG LVI ALLK VPA+ IVAAVR+ +KA DLAALGVQVR ADY AS D Sbjct: 1 MIVVTGATGQLGHLVIKALLKKVPASGIVAAVRNVDKAKDLAALGVQVRFADYNQPASWD 60 Query: 61 AALQGAEKVLLISSSEIGSRLAQHRAVIDAAKRANVKLLAYTSVLRADSSTLGLAAEHEQ 120 AAL+GA+KVLLISSSEIG R QH+AVIDAAK+A VKLLAYTSVLRAD+S LGLAAEH + Sbjct: 61 AALKGADKVLLISSSEIGQRAKQHKAVIDAAKKAGVKLLAYTSVLRADTSPLGLAAEHRE 120 Query: 121 TEQAIKDSGVPATILRNGWYHENYTAGLPTAVANGAIVGSAGDGRISSAARSDYAEAAAA 180 TE I+ SGVP +LR+GWY ENYTAG+P A+A+GA+ G AG+GRISSAAR+DYAEA A Sbjct: 121 TEAYIRASGVPFVLLRHGWYTENYTAGIPGALAHGAVYGCAGNGRISSAARADYAEADVA 180 Query: 181 VLSGSGHAGKTYELAGDGAYTLSELAAEAARQSGKPVEYRNIPEADYKTALLGFGLPEVI 240 V++ G +GK YELAGD AYTL+ELAAE +RQSGK + Y N+ EA+YK L+ GLPE + Sbjct: 181 VIAADGQSGKVYELAGDSAYTLAELAAEISRQSGKDIGYVNLLEAEYKNVLIKVGLPEPV 240 Query: 241 AVLLSDSDAAAAKGALFDDGRQLSALIGRPTTSLSASVETAL 282 A LLSDSD +KG LFDD QLS LIGRPTT L+ +V+ A+ Sbjct: 241 ADLLSDSDTGVSKGGLFDDSHQLSKLIGRPTTPLAVAVKVAM 282 >ref|YP_001006020.1| hypothetical protein YE1738 [Yersinia enterocolitica subsp. enterocolitica 8081] emb|CAL11812.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 285 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/272 (68%), Positives = 220/272 (80%) Query: 1 MIVVTGATGQLGRLVIAALLKTVPAANIVAAVRSPEKAADLAALGVQVRRADYTDAASLD 60 MI VTGATGQLGRLVI ALLK V A+ I+AAVRSPEKA+DLAALGVQVR+ADY+ A+L+ Sbjct: 1 MIAVTGATGQLGRLVINALLKKVSASEIIAAVRSPEKASDLAALGVQVRKADYSQPATLE 60 Query: 61 AALQGAEKVLLISSSEIGSRLAQHRAVIDAAKRANVKLLAYTSVLRADSSTLGLAAEHEQ 120 AA QG +K+LLISSSE+G R+AQH AVI+AAK A VKLLAYTS+L AD STLGL EH Sbjct: 61 AAFQGVDKLLLISSSEVGQRVAQHAAVINAAKHAGVKLLAYTSLLHADKSTLGLGDEHRA 120 Query: 121 TEQAIKDSGVPATILRNGWYHENYTAGLPTAVANGAIVGSAGDGRISSAARSDYAEAAAA 180 TE +++SG+P +LRNGWY ENY A + ++ +GA +G+AGDGRI+SA R DYA+AAAA Sbjct: 121 TEALLRESGLPVVLLRNGWYTENYAASIAPSLDHGAFIGAAGDGRIASATREDYAQAAAA 180 Query: 181 VLSGSGHAGKTYELAGDGAYTLSELAAEAARQSGKPVEYRNIPEADYKTALLGFGLPEVI 240 VL+ AGK YELAGD +YTL+E +AE ARQSGKPVEY+N+ EAD+K AL+G GLPE Sbjct: 181 VLTQENQAGKIYELAGDDSYTLAEFSAEIARQSGKPVEYKNLSEADFKQALIGAGLPEGF 240 Query: 241 AVLLSDSDAAAAKGALFDDGRQLSALIGRPTT 272 A LL+DSDA AAKG LFDD LS LIGRPTT Sbjct: 241 ASLLADSDAGAAKGGLFDDSHTLSKLIGRPTT 272 >ref|ZP_04641566.1| Uncharacterized oxidoreductase ytfG [Yersinia mollaretii ATCC 43969] gb|EEQ09886.1| Uncharacterized oxidoreductase ytfG [Yersinia mollaretii ATCC 43969] Length = 285 Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 182/272 (66%), Positives = 219/272 (80%) Query: 1 MIVVTGATGQLGRLVIAALLKTVPAANIVAAVRSPEKAADLAALGVQVRRADYTDAASLD 60 MI VTGATGQLGRLVI ALLK VPA+ I+AAVRSPEKA+DLAALG+QVR+ADY+ A+LD Sbjct: 1 MIAVTGATGQLGRLVINALLKKVPASEIIAAVRSPEKASDLAALGIQVRKADYSQPATLD 60 Query: 61 AALQGAEKVLLISSSEIGSRLAQHRAVIDAAKRANVKLLAYTSVLRADSSTLGLAAEHEQ 120 +A QG +K+LLISSSE+G R+AQH AVI+AAKRA VKLLAYTS+L AD S+LGL EH Sbjct: 61 SAFQGVDKLLLISSSEVGQRVAQHTAVIEAAKRAGVKLLAYTSLLHADKSSLGLGEEHRA 120 Query: 121 TEQAIKDSGVPATILRNGWYHENYTAGLPTAVANGAIVGSAGDGRISSAARSDYAEAAAA 180 TE +++SG+P +LRNGWY ENY A + A+A+G +GS G+GRI+SAAR DYAEAAA Sbjct: 121 TEALLRESGLPVVLLRNGWYTENYAASIAPALAHGVFIGSVGEGRIASAARQDYAEAAAV 180 Query: 181 VLSGSGHAGKTYELAGDGAYTLSELAAEAARQSGKPVEYRNIPEADYKTALLGFGLPEVI 240 VL+ AGK YELAGD +YTL+E +AE ARQSGK V Y+++ EAD++ AL+G GLPE Sbjct: 181 VLTQENQAGKVYELAGDDSYTLAEFSAEIARQSGKAVVYQDLSEADFRQALIGAGLPEGF 240 Query: 241 AVLLSDSDAAAAKGALFDDGRQLSALIGRPTT 272 A LL+DSDA AAKG LFDD LS LIGRPTT Sbjct: 241 ATLLADSDAGAAKGGLFDDSHTLSKLIGRPTT 272 >ref|ZP_04611124.1| Uncharacterized oxidoreductase ytfG [Yersinia rohdei ATCC 43380] gb|EEQ04487.1| Uncharacterized oxidoreductase ytfG [Yersinia rohdei ATCC 43380] Length = 285 Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 180/272 (66%), Positives = 222/272 (81%) Query: 1 MIVVTGATGQLGRLVIAALLKTVPAANIVAAVRSPEKAADLAALGVQVRRADYTDAASLD 60 MI VTGATGQLGRLVI ALLK +PA+ I+AAVRSPEKA+DLAALG+QVR+ADY+ A+LD Sbjct: 1 MIAVTGATGQLGRLVINALLKKIPASEIIAAVRSPEKASDLAALGIQVRKADYSQPATLD 60 Query: 61 AALQGAEKVLLISSSEIGSRLAQHRAVIDAAKRANVKLLAYTSVLRADSSTLGLAAEHEQ 120 +A QG +K+LLISSSE+G R+AQH AVI+AAKRA VKLLAYTS+L AD+S LGL EH Sbjct: 61 SAFQGVDKLLLISSSEVGQRVAQHTAVINAAKRAGVKLLAYTSLLHADNSVLGLGEEHRA 120 Query: 121 TEQAIKDSGVPATILRNGWYHENYTAGLPTAVANGAIVGSAGDGRISSAARSDYAEAAAA 180 TE+ +++SG+P +LRNGWY ENY A + A+A+ A +G+ G+GRI+SA+R DYA+AAA Sbjct: 121 TEKLLRESGLPVVLLRNGWYTENYAASIAPALAHSAFIGAVGNGRIASASREDYAQAAAV 180 Query: 181 VLSGSGHAGKTYELAGDGAYTLSELAAEAARQSGKPVEYRNIPEADYKTALLGFGLPEVI 240 VL + AGK YELAGD +YTL+E +AE ARQSGKPV Y+++ EAD+K ALLG GLPE + Sbjct: 181 VLIQADQAGKVYELAGDDSYTLAEFSAEIARQSGKPVVYKDLSEADFKQALLGAGLPEGL 240 Query: 241 AVLLSDSDAAAAKGALFDDGRQLSALIGRPTT 272 A +L+DSDA AAKG LFDD LS LIGRPTT Sbjct: 241 AAMLADSDAGAAKGGLFDDSHTLSKLIGRPTT 272 >ref|ZP_04635455.1| Uncharacterized oxidoreductase ytfG [Yersinia intermedia ATCC 29909] gb|EEQ20439.1| Uncharacterized oxidoreductase ytfG [Yersinia intermedia ATCC 29909] Length = 285 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 183/272 (67%), Positives = 215/272 (79%) Query: 1 MIVVTGATGQLGRLVIAALLKTVPAANIVAAVRSPEKAADLAALGVQVRRADYTDAASLD 60 MI VTGATGQLGRLVI ALLK VPA+ I+AAVR+PEKA DLAALGVQ+R+ADY+ A+LD Sbjct: 1 MIAVTGATGQLGRLVINALLKKVPASEIIAAVRNPEKAHDLAALGVQIRKADYSQPATLD 60 Query: 61 AALQGAEKVLLISSSEIGSRLAQHRAVIDAAKRANVKLLAYTSVLRADSSTLGLAAEHEQ 120 A QG +K+LLISSSE+G R+AQH AVI AAKRA VKLLAYTS+L AD S LGL EH Sbjct: 61 TAFQGVDKLLLISSSEVGQRIAQHSAVIAAAKRAGVKLLAYTSLLHADKSPLGLGEEHRA 120 Query: 121 TEQAIKDSGVPATILRNGWYHENYTAGLPTAVANGAIVGSAGDGRISSAARSDYAEAAAA 180 TE +++SG+P +LRNGWY ENY A + A+A+GA +G+ +GRI+SAAR DYAEAAA Sbjct: 121 TEALLRESGLPVVLLRNGWYTENYAASIAPALAHGAFIGAVAEGRIASAAREDYAEAAAV 180 Query: 181 VLSGSGHAGKTYELAGDGAYTLSELAAEAARQSGKPVEYRNIPEADYKTALLGFGLPEVI 240 VL+ AGK YELAGD YTL+E +AE ARQSGKPV Y ++ EAD+K ALLG GLP+V Sbjct: 181 VLTQGNQAGKVYELAGDDIYTLAEFSAEIARQSGKPVVYHDLSEADFKQALLGAGLPDVF 240 Query: 241 AVLLSDSDAAAAKGALFDDGRQLSALIGRPTT 272 A LL+DSDA AAKG LFDD LS LIGRPTT Sbjct: 241 ASLLADSDAGAAKGGLFDDSHTLSKLIGRPTT 272