BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0076.p (362 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002539761.1| oxidoreductase [Agrobacterium vitis S4] >gi|... 287 2e-75 ref|YP_001506222.1| FAD dependent oxidoreductase [Frankia sp. EA... 206 4e-51 ref|YP_003320416.1| FAD dependent oxidoreductase [Sphaerobacter ... 203 3e-50 ref|YP_003113295.1| FAD dependent oxidoreductase [Catenulispora ... 194 3e-47 ref|YP_004360759.1| hypothetical protein bgla_1g21740 [Burkholde... 189 6e-46 >ref|YP_002539761.1| oxidoreductase [Agrobacterium vitis S4] gb|ACM40056.1| oxidoreductase [Agrobacterium vitis S4] Length = 376 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 159/367 (43%), Positives = 221/367 (60%), Gaps = 10/367 (2%) Query: 3 IVIGAGVIGASVAYHLARAGAPVTVIDAGRIGGGTSGSSFAWVNSHNKAPRAYHDLNVAG 62 +VIGAG++G+SVAY A+AGA VTV++AGRI GG S SSFAW N+ K P+ Y LNVAG Sbjct: 4 VVIGAGIVGSSVAYEAAKAGAQVTVLEAGRIAGGASTSSFAWTNATGKRPQPYFALNVAG 63 Query: 63 MRAHAALRECFGDAPWWHGGGTVEWESIAPE--AYRAKVALLQSWGYTAEWLDHAALHAL 120 MRAH L FG APW+H G++EW S + A ++ WGY EW+ + L L Sbjct: 64 MRAHLDLAREFGHAPWFHQTGSIEWYSDESDWPAQLDNADQMRDWGYGVEWISKSRLTEL 123 Query: 121 EPDINLGAVGDAPVAFFPDDGWVDPVVYSHALLTEAK-RLGAQVFQHLAVTAIRRQGSRV 179 EP+I+ GA+ +P+ ++P++GWV P +Y+ LL AK + A + VT+I Q Sbjct: 124 EPEIDHGAIKQSPLVYYPEEGWVHPALYAAWLLRAAKEKWNADIRPFSGVTSIDVQNGVA 183 Query: 180 TGVTTADGATHDADVVVNATGRWADQ--SALPLDLRIPLAPSAGLMLFTPPLAHGVQRVI 237 V T DGA +AD ++N TG WA +P IP+A + G++ FT P+A ++R Sbjct: 184 KAVKTVDGAAFEADAIINCTGSWAAHVLEGVPA---IPMASNMGIVGFTLPIATTLRRQF 240 Query: 238 FSPRVHIRPDGAGRLLICRNDLE--VTADAELDRCSPEVTGLLAAAREVLPLLRHVDAEA 295 + +RPDGAGRL+I + ++ VT L+ PE LL A R+VLP ++ D E+ Sbjct: 241 HMDDLDVRPDGAGRLMIHKVSVDSLVTKMQPLNTQGPEAALLLDAVRKVLPAIQPDDMES 300 Query: 296 LRVGVRAIPADQFPAVGPSPGTKGYYSVVTHSGVTLAPFLGEAVAEEILNNTVRPELASF 355 +R VR IP D G PG GYY VTHSGV++AP LG+AVA+E++ + L F Sbjct: 301 IRTIVRPIPGDNLTCSGWVPGVDGYYVAVTHSGVSIAPHLGKAVAQEVVRGRLHESLTDF 360 Query: 356 RPQRFFS 362 RP RF + Sbjct: 361 RPDRFLA 367 >ref|YP_001506222.1| FAD dependent oxidoreductase [Frankia sp. EAN1pec] gb|ABW11316.1| FAD dependent oxidoreductase [Frankia sp. EAN1pec] Length = 379 Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 124/349 (35%), Positives = 186/349 (53%), Gaps = 6/349 (1%) Query: 18 LARAGAPVTVIDAGRIGGGTSGSSFAWVNSHNKAPRAYHDLNVAGMRAHAALRECFGDAP 77 LAR GA V +++AG GGTSG++FAW+N+ +K YH VA M AH L Sbjct: 21 LARRGARVVIVEAGAPAGGTSGATFAWINASSKQSHPYHAFGVAAMDAHRRLAAETPAGD 80 Query: 78 WWHGGGTVEWESIAPE--AYRAKVALLQSWGYTAEWLDHAALHALEPDINLGAVGDAPVA 135 W+H G ++WE+ E R KVA + ++GY WL A LEPD++ A+ +A Sbjct: 81 WYHESGNLQWETADAEHEVLRRKVATVVAYGYEVRWLSRAEALKLEPDVDPAALPADEIA 140 Query: 136 FFPDDGWVDPVVYSHALLTEAKRLGAQVFQHLAVTAIRRQGSRVTGVTTADGATHDADVV 195 +FP +GWV+P LL+ A GA++ V ++R V V A G + A V Sbjct: 141 YFPREGWVEPARLVGHLLSRAVSRGAELVTDDPVVSLRIAAGLVRAVGLASGRSISAGAV 200 Query: 196 VNATGRWADQSALPLDLRIPLAPSAGLMLFTPPLAHGVQRVIFSPRVHIRPDGAGRLLIC 255 VN G A A+ L +P+ + G+++ T P+ RVI +P VH+RPDG GRLL+ Sbjct: 201 VNCAGPRAGAIAVLAGLDLPMRNTHGVLVHTSPVTVSASRVIHAPDVHLRPDGGGRLLLH 260 Query: 256 RNDLE----VTADAELDRCSPEVTGLLAAAREVLPLLRHVDAEALRVGVRAIPADQFPAV 311 ++ ++ + E+ V +L A+R + P +R E +R+G R IP D P + Sbjct: 261 TQAIDGAVRISGNGEMSADGSAVETILEASRVLYPGIRAATVEKVRIGERPIPGDGLPVL 320 Query: 312 GPSPGTKGYYSVVTHSGVTLAPFLGEAVAEEILNNTVRPELASFRPQRF 360 G + ++ V+HSGVTL+ G+ VA E++ ELA+FR +RF Sbjct: 321 GRAVELPNFHFAVSHSGVTLSVHAGDLVAAEVMGEDHSDELAAFRIERF 369 >ref|YP_003320416.1| FAD dependent oxidoreductase [Sphaerobacter thermophilus DSM 20745] gb|ACZ39594.1| FAD dependent oxidoreductase [Sphaerobacter thermophilus DSM 20745] Length = 395 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 139/369 (37%), Positives = 197/369 (53%), Gaps = 13/369 (3%) Query: 3 IVIGAGVIGASVAYHLARAGAPVTVIDAGRIGGGTSGSSFAWVNSHNKAPRAYHDLNVAG 62 +VIGAG +G+ AY LA+AGA VTV++ G GT+G+SFAW+NS NK PR YH LN Sbjct: 20 VVIGAGAVGSVAAYRLAQAGAAVTVVEPRFPGAGTTGNSFAWLNSFNKTPRHYHRLNARS 79 Query: 63 MRAHAAL-RECFGDAPWWHGGGTVEW----ESIAPEAYRAKVALLQSWGYTAEWLD-HAA 116 +R HA L RE GD W H G + W ++ + R L WGY E + Sbjct: 80 IRDHADLARELDGD--WVHIDGGLHWCYADDAEQVQRLRTVTRRLHEWGYRIETVTPEQV 137 Query: 117 LHALEPDINLGAVGDAPVAFFPDDGWVDPVVYSHALLTEA-KRLGAQVFQHLAVTAIRRQ 175 + LEPD+ + V + P +GW++ V H L+ A +R GA++ Q V Sbjct: 138 MRELEPDLVIDPDRVEEVFYTPGEGWLNGVGLCHGALSAAVRRYGARLVQDTVVDLSGPA 197 Query: 176 GSRVTGVTTADGATHDADVVVNATGRWADQSALPLDLRIPLAPSAGLMLFTPPLAHGVQR 235 G+ + V A G AD V+NA G A + A + +P++ GL++ T P ++R Sbjct: 198 GA-IDTVVLAGGERLGADAVINAAGPDAGRIAAMAGVDLPVSRQPGLLVTTEPAPVSLKR 256 Query: 236 VIFSPRVHIRPDGAGRLLICRNDLEVTADAE--LDRCSPEVTGLLAAAREVLPLLRHVDA 293 VI +P ++R DG R+LI R + + ++E LD P + ++P LR + A Sbjct: 257 VIHAPEGNLRADGGWRMLIQRTNFDQLVESEQPLDVSHPVCQESVDHLATIVPGLRGIRA 316 Query: 294 EALRVGVRAIPADQFPAVGPSPGTKGYYSVVTHSGVTLAPFLGEAVAEEILNNTVRPELA 353 E+ R+GVR +P D P VG P G Y +V HSGVTL+ +G V E+ L T PELA Sbjct: 317 ESARMGVRPMPKDGHPIVGFDPAVNGLYHLVMHSGVTLSATMGNLVVEDFL-QTDPPELA 375 Query: 354 SFRPQRFFS 362 +RP RF S Sbjct: 376 PYRPARFTS 384 >ref|YP_003113295.1| FAD dependent oxidoreductase [Catenulispora acidiphila DSM 44928] gb|ACU71454.1| FAD dependent oxidoreductase [Catenulispora acidiphila DSM 44928] Length = 364 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 136/377 (36%), Positives = 187/377 (49%), Gaps = 39/377 (10%) Query: 4 VIGAGVIGASVAYHLARAGAPVTVIDAGRIGGGTSGSSFAWVNSHNKA-PRAYHDLNVAG 62 VIG G++G+SV ++LAR GA V ++DAGR G G + +F+WVN+ NK R+Y DLNVAG Sbjct: 5 VIGVGILGSSVGWNLARRGAEVILLDAGRPGEGVTDWTFSWVNASNKTVRRSYFDLNVAG 64 Query: 63 MRAHAALRECFGDAPWWHGGGTVEW--ESIAPEAYRAKVALLQSWGYTAEWLDHAALHAL 120 + + L E G WW+ GG + W + A + LL W Y E L L Sbjct: 65 VAEYRELAEVIGPDSWWYPGGHLRWADDPAAQAKWLGIAELLTRWDYPVEILTGEQARRL 124 Query: 121 EPDINLGAVGDAPVAFFPDDGWVDPVVYSHALLTEAKRLGAQVFQHLAV--------TAI 172 EP + + PV F+PD+ WV +RL ++ +A+ Sbjct: 125 EPALTMSEA--TPVVFYPDEAWV-----------HGRRLVGRLVAEAVAAGAECRFDSAV 171 Query: 173 RRQGSRVTG----VTTADGATHDADVVVNATGRWADQSALPLDLRIPLAPSAGLMLFTPP 228 R G+ G V +DG + +ADVVVNATG A + A + +P+ G + Sbjct: 172 RDIGTSADGSVRTVVLSDGNSLEADVVVNATGPAAAEIAGLVGRALPMRWEPGAVTRIDC 231 Query: 229 LAHGVQRVIFSPRVHIRPDGAGRLLICRNDLEVTAD-----AELDRCSPEVTGLLAAARE 283 +QRV+ +P + IRPDG +++ +++ D AEL R L A R Sbjct: 232 DRVPIQRVMHAPHIEIRPDGDASMVLHSREIDALIDTAVNPAELGRL------LQDAVRR 285 Query: 284 VLPLLRHVDAEALRVGVRAIPADQFPAVGPSPGTKGYYSVVTHSGVTLAPFLGEAVAEEI 343 VLP L RV R IP D FP+VG P GYY V+HSG+TL P LG +AEEI Sbjct: 286 VLPGLDSSRIVETRVSNRPIPDDGFPSVGAIPSVPGYYEAVSHSGITLGPVLGRLLAEEI 345 Query: 344 LNNTVRPELASFRPQRF 360 L LA FRP+RF Sbjct: 346 LGGAPDALLADFRPERF 362 >ref|YP_004360759.1| hypothetical protein bgla_1g21740 [Burkholderia gladioli BSR3] gb|AEA60803.1| hypothetical protein bgla_1g21740 [Burkholderia gladioli BSR3] Length = 396 Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 132/370 (35%), Positives = 186/370 (50%), Gaps = 14/370 (3%) Query: 4 VIGAGVIGASVAYHLARAGAPVTVIDAGRIGGGTSGSSFAWVNSHNKAPRAYHDLNVAGM 63 VIGAGVIG SVA LAR GA V++++ R+G GTS ++FAW+NS+ K P +YH LN AGM Sbjct: 10 VIGAGVIGLSVARSLARLGAQVSILEQSRLGSGTSSTTFAWINSNGKQPESYHALNCAGM 69 Query: 64 RAHAALR-ECFGDAPWWHGGGTVEWESIAPEAYR--AKVALLQSWGYTAEWLDHAALHAL 120 H AL+ + G+A W GT EW A + A+ L++ GY E + A+L Sbjct: 70 AEHVALQGDGAGEARWLDVCGTYEWAIDAARQAQLDARATALKALGYAVEEVSRASLQQR 129 Query: 121 EPDINLGAVGDAPVAFFPDDGWVDPVVYSHALLTEAKRLGAQVFQHLAVTAIRRQGSRVT 180 P++ + A + +F ++ V P + L EA+ GA + + ++V I VT Sbjct: 130 IPELRIDAR-SGTIRYFAEEALVSPSILMARLWAEARSHGAVLRESVSVVDIAETLQGVT 188 Query: 181 GVTTADGATHDADVVVNATGRWADQ-------SALPLDLRIPLAPSAGLMLFTPPLAHGV 233 + + G D V ATGRW + S LD P + G + T P + Sbjct: 189 -LDLSTGERWQGDYCVLATGRWTPELMPALGVSLAMLDANRPDKRACGFLASTDPQFVQL 247 Query: 234 QRVIFSPRVHIRPDGAGRLLICRNDLEVTADAELDRCSPEVTG--LLAAAREVLPLLRHV 291 + + P +++RPDG GRLL+ DL+ AD G +LA R + H Sbjct: 248 RANLIGPELNVRPDGGGRLLLQATDLDDRADPVHQAAIDGYVGREMLARLRRLFANTGHA 307 Query: 292 DAEALRVGVRAIPADQFPAVGPSPGTKGYYSVVTHSGVTLAPFLGEAVAEEILNNTVRPE 351 E L VG R+ PAD PAVG + Y V THSG+TL P LG VAEE+++ Sbjct: 308 RIERLSVGQRSRPADGLPAVGFVTARQRAYVVATHSGMTLGPLLGRLVAEELVHQRRDGL 367 Query: 352 LASFRPQRFF 361 LA + P R Sbjct: 368 LADYSPARLI 377