BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0068.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001166997.1| NLPA lipoprotein [Rhodobacter sphaeroides AT... 271 8e-71 ref|YP_003452727.1| D-methionine transport system substrate-bind... 268 5e-70 ref|YP_001416033.1| NLPA lipoprotein [Xanthobacter autotrophicus... 248 6e-64 ref|YP_001526090.1| NLPA lipoprotein precursor [Azorhizobium cau... 245 4e-63 ref|YP_002229920.1| hypothetical protein BCAL0763 [Burkholderia ... 236 2e-60 >ref|YP_001166997.1| NLPA lipoprotein [Rhodobacter sphaeroides ATCC 17025] gb|ABP69692.1| NLPA lipoprotein [Rhodobacter sphaeroides ATCC 17025] Length = 264 Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 128/250 (51%), Positives = 173/250 (69%), Gaps = 1/250 (0%) Query: 14 AALAFSANVFAADAPLRVGASPGPFSDFLQEAAKIANAQGFPVKVIEFTEPTQINEATQA 73 A L + +AAD PL++G S GP+ D L+ A++A AQG ++IEFT+ INEA Sbjct: 16 ATLGLALPAWAAD-PLKIGVSAGPYGDILRHTAELAAAQGIEAEIIEFTDWPLINEALAH 74 Query: 74 GDIDLNNFQHVPYMQKQNESRGYKIVSIKPTYVAPAGIYSARHKSLAAFPQGAKIGIPND 133 GD+D NNFQH+PY+Q Q +RG+ +V + V P G+YSAR SL P+G I IPND Sbjct: 75 GDLDANNFQHIPYLQNQITARGFDLVPGPASIVVPTGVYSARLTSLTDLPEGGTIAIPND 134 Query: 134 PANEARALFLLQKAGLIKLKADANTNAGVADIAENPKKLNIVLLDEVQLPRVLVDIDAGV 193 P+N ARALFLL+KAG+I+LK A A V D+A NP+ L+ V LD QLP L D+DA V Sbjct: 135 PSNAARALFLLEKAGVIRLKEGAGITATVLDLAGNPRNLHFVELDAAQLPTSLPDVDAAV 194 Query: 194 ITLNKGVLAGLNPKDALLLEDKTSQWAIIWAARADRKDDPRIARFIKIFESEQIKQFIIK 253 ITLN VLAGL+PK AL+LED+ S+W ++WA R D DDPR+ FI ++ S ++K+FI+ Sbjct: 195 ITLNYAVLAGLDPKTALILEDEHSRWHLVWATRRDNADDPRLKAFIDLYRSAEVKEFILT 254 Query: 254 KFNGTVIPAW 263 +F+GT++P W Sbjct: 255 RFDGTILPTW 264 >ref|YP_003452727.1| D-methionine transport system substrate-binding protein [Azospirillum sp. B510] dbj|BAI76183.1| D-methionine transport system substrate-binding protein [Azospirillum sp. B510] Length = 263 Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 135/253 (53%), Positives = 172/253 (67%), Gaps = 3/253 (1%) Query: 11 LFTAALAFSANVFAADAPLRVGASPGPFSDFLQEAAKIANAQGFPVKVIEFTEPTQINEA 70 L +AA AFS+ V AA PL++G S GP+ + L+ AK+A +G +VIEFT+ N A Sbjct: 14 LLSAATAFSSAVLAA--PLKLGVSAGPYGEILEFTAKLAAKEGIEAQVIEFTDWNMPNAA 71 Query: 71 TQAGDIDLNNFQHVPYMQKQNESRGYKIVSIKPTYVAPAGIYSARHKSLAAFPQGAKIGI 130 QAGDID NNFQH P++ Q + RGY IVS+ + V P G+YS + K+LA GA I I Sbjct: 72 LQAGDIDANNFQHQPFLDNQVKQRGYDIVSVAKSVVVPMGVYSGKVKTLADLKPGASISI 131 Query: 131 PNDPANEARALFLLQKAGLIKLKADANTNAGVADIAENPKKLNIVLLDEVQLPRVLVDID 190 PNDP N ARALFLL KAG+I LK A N +AD+ NPK + +V LD QLPR L D+D Sbjct: 132 PNDPTNGARALFLLAKAGVIGLKEGAGLNTTIADVV-NPKGIKLVELDAAQLPRSLDDVD 190 Query: 191 AGVITLNKGVLAGLNPKDALLLEDKTSQWAIIWAARADRKDDPRIARFIKIFESEQIKQF 250 A VITLN VLAGL PK ALLLED S+W ++WA R DR +DP I RFI ++ S +++QF Sbjct: 191 ASVITLNYAVLAGLEPKKALLLEDDQSKWNLVWAVRKDRMEDPTIKRFIALYRSPEVRQF 250 Query: 251 IIKKFNGTVIPAW 263 I +FNG++IP W Sbjct: 251 IETRFNGSIIPTW 263 >ref|YP_001416033.1| NLPA lipoprotein [Xanthobacter autotrophicus Py2] gb|ABS66376.1| NLPA lipoprotein [Xanthobacter autotrophicus Py2] Length = 281 Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 122/242 (50%), Positives = 164/242 (67%), Gaps = 4/242 (1%) Query: 26 DAPLRVGASPGPFSDFLQEAAKIANAQGFPVKVIEFTEPTQINEATQAGDIDLNNFQHVP 85 D PL+VG S GP+ D L+EAA+++ QG ++IEFT+ Q N A QAGDIDLNNFQ+ P Sbjct: 40 DKPLKVGVSAGPYGDVLREAARLSEKQGVKAEIIEFTDWNQPNAALQAGDIDLNNFQNRP 99 Query: 86 YMQKQNESRGYKIVSIKPTYVAPAGIYSARHKSLAAFPQGAKIGIPNDPANEARALFLLQ 145 Y+ Q ++R Y+IV++ + + PAGIYS + S A P GAKI IPNDP N RAL L Q Sbjct: 100 YLSNQIKTRNYQIVALDESLLVPAGIYSKTYTSAADIPAGAKIAIPNDPTNGGRALLLFQ 159 Query: 146 KAGLIKLKADANTNAGVADIAENPKKLNIVLLDEVQLPRVLVDIDAGVITLNKGVLAGLN 205 KAGLIKLK A V D+AENP+KL IV +D QLPR L D+ A ++ N LAGL+ Sbjct: 160 KAGLIKLKPGTGLYASVLDVAENPRKLQIVEIDAAQLPRSLDDVAAAFVSSNYAYLAGLD 219 Query: 206 PKDALLLEDKTSQ----WAIIWAARADRKDDPRIARFIKIFESEQIKQFIIKKFNGTVIP 261 AL+ E + + +++AAR DRKDDPRIA+FI+++ S+ +K F + KF G+++P Sbjct: 220 LNTALVAETSVEEAKPYFTLVFAAREDRKDDPRIAKFIEVYRSQPVKDFTLAKFKGSILP 279 Query: 262 AW 263 AW Sbjct: 280 AW 281 >ref|YP_001526090.1| NLPA lipoprotein precursor [Azorhizobium caulinodans ORS 571] dbj|BAF89172.1| NLPA lipoprotein precursor [Azorhizobium caulinodans ORS 571] Length = 296 Score = 245 bits (626), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 122/243 (50%), Positives = 163/243 (67%), Gaps = 4/243 (1%) Query: 25 ADAPLRVGASPGPFSDFLQEAAKIANAQGFPVKVIEFTEPTQINEATQAGDIDLNNFQHV 84 AD PL+VG S GP+ D L+EAAK+A G ++IEFT+ Q N A QAGDIDLNNFQH Sbjct: 54 ADKPLKVGVSAGPYGDILREAAKVAAKDGLKAEIIEFTDWNQPNAALQAGDIDLNNFQHR 113 Query: 85 PYMQKQNESRGYKIVSIKPTYVAPAGIYSARHKSLAAFPQGAKIGIPNDPANEARALFLL 144 Y+ Q ++RGY++V++ + + PAG+YS + +A P GAKI IPNDP N ARAL L Sbjct: 114 FYLANQIKARGYQLVALDESILVPAGLYSKSYTKIADIPDGAKIAIPNDPTNAARALLLF 173 Query: 145 QKAGLIKLKADANTNAGVADIAENPKKLNIVLLDEVQLPRVLVDIDAGVITLNKGVLAGL 204 Q+AGL+KLK NA V D+ NPKKL I+ +D QLPR L D+ ++ N LAGL Sbjct: 174 QRAGLLKLKPTTGLNATVLDVESNPKKLQILEIDAAQLPRSLDDVAVAFVSSNYAYLAGL 233 Query: 205 NPKDALLLEDKTSQ----WAIIWAARADRKDDPRIARFIKIFESEQIKQFIIKKFNGTVI 260 + + ALL E + ++ + +I+AA DRKDDPRI FI + S+ +K FI++KFNGT+ Sbjct: 234 SLRKALLAETEVAESKPYFTLIFAACEDRKDDPRIKAFIAAYRSQAVKDFIVEKFNGTIQ 293 Query: 261 PAW 263 PAW Sbjct: 294 PAW 296 >ref|YP_002229920.1| hypothetical protein BCAL0763 [Burkholderia cenocepacia J2315] emb|CAR51071.1| putative exported protein [Burkholderia cenocepacia J2315] Length = 271 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 128/255 (50%), Positives = 166/255 (65%), Gaps = 5/255 (1%) Query: 14 AALAFSANVFAADAPLRVGASPGPFSDFLQEAAKIA-NAQGFPVKVIEFTEPTQINEATQ 72 AAL SA A D ++VG GP S+ Q K+A +G VKVIEF + Q N A Sbjct: 17 AALTLSAGAHAEDKVIKVGTVAGPDSEVWQVVQKVAKEKEGLNVKVIEFNDYVQPNAALD 76 Query: 73 AGDIDLNNFQHVPYMQKQNESRGYKIVSIKPTYVAPAGIYSARHKSLAAFPQGAKIGIPN 132 +GD+D N+FQH PY+ Q + RGYKIVS TY++P G+YS + KSL PQGAK+ +PN Sbjct: 77 SGDLDANSFQHQPYLDSQVKQRGYKIVSAGLTYISPIGVYSKKFKSLKDLPQGAKLAVPN 136 Query: 133 DPANEARALFLLQKAGLIKLKADANT---NAGVADIAENPKKLNIVLLDEVQLPRVLVDI 189 DP+NE RAL LLQ G+IKLKA A T NA V DIAENPKKL I LD QLPRVL D+ Sbjct: 137 DPSNENRALLLLQTQGVIKLKAGAGTGGNNATVLDIAENPKKLKISELDAAQLPRVLSDV 196 Query: 190 DAGVITLNKGVLAGLNP-KDALLLEDKTSQWAIIWAARADRKDDPRIARFIKIFESEQIK 248 DA VI N + A L P KDA+ LE TS +A + A RA KD P + + +K ++S ++K Sbjct: 197 DAAVINTNYALAANLQPTKDAIALESLTSPYANLIAVRAKDKDQPWVKKLVKAYQSPEVK 256 Query: 249 QFIIKKFNGTVIPAW 263 +FI K+F G+++ ++ Sbjct: 257 EFIKKQFKGSMVASF 271