BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0060.p (156 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002290476.1| isoquinoline 1-oxidoreductase subunit alpha ... 209 1e-52 ref|YP_001922957.1| (2Fe-2S)-binding domain-containing protein [... 207 4e-52 ref|YP_002363640.1| (2Fe-2S)-binding domain-containing protein [... 206 8e-52 ref|YP_001769978.1| 2Fe-2S iron-sulfur cluster binding domain-co... 206 1e-51 ref|YP_002495055.1| (2Fe-2S)-binding domain-containing protein [... 202 2e-50 >ref|YP_002290476.1| isoquinoline 1-oxidoreductase subunit alpha [Oligotropha carboxidovorans OM5] ref|YP_004631593.1| isoquinoline 1-oxidoreductase subunit alpha IorA [Oligotropha carboxidovorans OM5] gb|ACI94611.1| isoquinoline 1-oxidoreductase subunit alpha [Oligotropha carboxidovorans OM5] gb|AEI01777.1| putative isoquinoline 1-oxidoreductase subunit alpha IorA [Oligotropha carboxidovorans OM4] gb|AEI05352.1| putative isoquinoline 1-oxidoreductase subunit alpha IorA [Oligotropha carboxidovorans OM5] Length = 156 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 97/148 (65%), Positives = 115/148 (77%), Gaps = 1/148 (0%) Query: 5 NFTVNGKARSVDVRDPEQPLLYALRNNIGLTGPKFGCGLGQCGACTVLLDQTPLRSCVTP 64 + TVNGK SV + DP+ PLLY LR+N+ L GP+FGCGL QCGACTV +D +RSCVTP Sbjct: 6 SLTVNGKKVSVRIDDPDMPLLYVLRDNLALHGPRFGCGLSQCGACTVHIDGAAVRSCVTP 65 Query: 65 LSAVAGK-SITTIEGLGTPDKPHPVQAAFIAEQAAQCGYCANGMVMTSAALLASNPKPSE 123 LS++ K + T+EGLGTP KPHPVQ AFI EQA QCGYC NGM+M SAA LA N KP+E Sbjct: 66 LSSITDKQKVVTLEGLGTPQKPHPVQRAFIEEQAVQCGYCINGMIMESAAFLAKNKKPTE 125 Query: 124 AEIKDALSANLCRCGTHVRILRAVMRAS 151 +IK+AL NLCRCGTH RI++AV RAS Sbjct: 126 EQIKEALGNNLCRCGTHSRIVKAVKRAS 153 >ref|YP_001922957.1| (2Fe-2S)-binding domain-containing protein [Methylobacterium populi BJ001] gb|ACB78422.1| (2Fe-2S)-binding domain protein [Methylobacterium populi BJ001] Length = 156 Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 98/150 (65%), Positives = 117/150 (78%), Gaps = 1/150 (0%) Query: 4 INFTVNGKARSVDVRDPEQPLLYALRNNIGLTGPKFGCGLGQCGACTVLLDQTPLRSCVT 63 ++ VNG A V V DPE PLLY LR+++GL GP+FGCGLGQCG+CTV +D +RSC+T Sbjct: 5 MSLDVNGNATRVTVDDPETPLLYVLRDDLGLHGPRFGCGLGQCGSCTVHIDGQAVRSCIT 64 Query: 64 PLSAVA-GKSITTIEGLGTPDKPHPVQAAFIAEQAAQCGYCANGMVMTSAALLASNPKPS 122 P+S + G I T+EGLG PDK HPVQAAFI EQAAQCGYC NGM+M SAALL PKP Sbjct: 65 PVSGLKPGAKIVTLEGLGGPDKLHPVQAAFIEEQAAQCGYCINGMIMQSAALLNETPKPD 124 Query: 123 EAEIKDALSANLCRCGTHVRILRAVMRASG 152 EA I+ AL+ NLCRCGTH+RI+RAV RA+G Sbjct: 125 EAAIRQALAQNLCRCGTHLRIVRAVQRAAG 154 >ref|YP_002363640.1| (2Fe-2S)-binding domain-containing protein [Methylocella silvestris BL2] gb|ACK52278.1| (2Fe-2S)-binding domain protein [Methylocella silvestris BL2] Length = 155 Score = 206 bits (525), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 91/152 (59%), Positives = 120/152 (78%) Query: 3 TINFTVNGKARSVDVRDPEQPLLYALRNNIGLTGPKFGCGLGQCGACTVLLDQTPLRSCV 62 +++ VNG+A ++ V DP PLLYALRN++ L GP+FGCGLGQCGACTV LD +RSC+ Sbjct: 4 SLSLNVNGRAETISVDDPNMPLLYALRNDLKLHGPRFGCGLGQCGACTVHLDGQAVRSCL 63 Query: 63 TPLSAVAGKSITTIEGLGTPDKPHPVQAAFIAEQAAQCGYCANGMVMTSAALLASNPKPS 122 P+++V + I T+EGLG+ D+PHP+Q AFI EQA QCGYC NGM+M +AA LA N PS Sbjct: 64 MPVASVGDRHIVTLEGLGSIDRPHPMQQAFIDEQAVQCGYCINGMIMEAAAFLARNKNPS 123 Query: 123 EAEIKDALSANLCRCGTHVRILRAVMRASGRT 154 + +I++AL++NLCRCGTH+RILRAV RA+ T Sbjct: 124 DTQIREALASNLCRCGTHLRILRAVKRAASTT 155 >ref|YP_001769978.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein [Methylobacterium sp. 4-46] gb|ACA17544.1| (2Fe-2S)-binding domain protein [Methylobacterium sp. 4-46] Length = 156 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 96/149 (64%), Positives = 122/149 (81%), Gaps = 1/149 (0%) Query: 4 INFTVNGKARSVDVRDPEQPLLYALRNNIGLTGPKFGCGLGQCGACTVLLDQTPLRSCVT 63 ++ TVNG+A V V DP+ PLLY LR+++GL GP+FGCGLGQCGACTV +D +RSC+T Sbjct: 5 MSLTVNGRAAPVSVDDPDTPLLYVLRDDLGLHGPRFGCGLGQCGACTVHVDGRAVRSCIT 64 Query: 64 PLSAVAGKS-ITTIEGLGTPDKPHPVQAAFIAEQAAQCGYCANGMVMTSAALLASNPKPS 122 P+S++ ++ I T+EGLG+P+ PHPVQAAFIAEQAAQCGYC NGM+M SAALL N KP Sbjct: 65 PVSSLKPEARIVTLEGLGSPETPHPVQAAFIAEQAAQCGYCINGMIMQSAALLNQNRKPD 124 Query: 123 EAEIKDALSANLCRCGTHVRILRAVMRAS 151 EA I+ AL+ NLCRCG+H+RI+RAV RA+ Sbjct: 125 EAAIRQALAGNLCRCGSHLRIVRAVQRAA 153 >ref|YP_002495055.1| (2Fe-2S)-binding domain-containing protein [Methylobacterium nodulans ORS 2060] gb|ACL62563.1| (2Fe-2S)-binding domain protein [Methylobacterium nodulans ORS 2060] Length = 156 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/149 (63%), Positives = 120/149 (80%), Gaps = 1/149 (0%) Query: 4 INFTVNGKARSVDVRDPEQPLLYALRNNIGLTGPKFGCGLGQCGACTVLLDQTPLRSCVT 63 ++ VNG+A V V DP+ PLLY LR+++GL GP+FGCGLGQCGACTV +D + SC+T Sbjct: 5 LSLNVNGRAAPVSVDDPDTPLLYVLRDDLGLRGPRFGCGLGQCGACTVHVDGQAVLSCIT 64 Query: 64 PLSAVAGKS-ITTIEGLGTPDKPHPVQAAFIAEQAAQCGYCANGMVMTSAALLASNPKPS 122 P+S++ ++ I T+EGLG+P+K HPVQAAFIAEQAAQCGYC NGM+M SAALL N KP Sbjct: 65 PMSSLKPEAKIVTLEGLGSPEKLHPVQAAFIAEQAAQCGYCINGMIMQSAALLNQNRKPD 124 Query: 123 EAEIKDALSANLCRCGTHVRILRAVMRAS 151 EA I+ AL+ NLCRCGTH+RI+RAV RA+ Sbjct: 125 EAAIRQALAGNLCRCGTHLRIVRAVQRAA 153