BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0057.p (461 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776543.1| D-galactonate transporter protein [Herbaspir... 752 0.0 ref|YP_276369.1| major facilitator superfamily transporter phtha... 666 0.0 ref|ZP_04586968.1| D-galactonate transporter [Pseudomonas syring... 665 0.0 ref|ZP_06496848.1| D-galactonate transporter [Pseudomonas syring... 665 0.0 ref|ZP_06459609.1| major facilitator superfamily transporter pht... 664 0.0 >ref|YP_003776543.1| D-galactonate transporter protein [Herbaspirillum seropedicae SmR1] gb|ADJ64635.1| D-galactonate transporter protein [Herbaspirillum seropedicae SmR1] Length = 439 Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/446 (84%), Positives = 395/446 (88%), Gaps = 10/446 (2%) Query: 14 AKENIKPSHVRYLILFMLFIVTTVNYADRATLSIAGTSMKSELGLDPVMMGYIFSAFSWA 73 A E KP+HVRYLILF+LF+VTTVNYADRATLSIAG++MK+EL LDPVMMGYIFSAFSWA Sbjct: 2 AGEVAKPTHVRYLILFLLFVVTTVNYADRATLSIAGSAMKTELSLDPVMMGYIFSAFSWA 61 Query: 74 YVLAQLPGGWLLDRFGSKKIYALSIFLWSFFTLLQGGVTWFGTAAAVVLLFLLRFMVGLA 133 YVLAQLPGGWLLDRFGSKKIY SI LWS FT LQ GVTW TAAAV LFLLRFMVGLA Sbjct: 62 YVLAQLPGGWLLDRFGSKKIYMWSIALWSVFTFLQAGVTWMSTAAAVASLFLLRFMVGLA 121 Query: 134 EAPSFPANGRIVASWFPTAERGTASAIFNSAQYFAAVLFTPLMGWITHVYGWHHVFTVMG 193 EAPSFPANGRIVA+WFPT ERGTASAIFNSAQYFAAVLFTPLM WI H Y WHHVFTVMG Sbjct: 122 EAPSFPANGRIVAAWFPTKERGTASAIFNSAQYFAAVLFTPLMAWIVHTYSWHHVFTVMG 181 Query: 194 AFGILLTFLWIRVIHSPKDHPMINQAELQHIEQGGGLVDMDQAKTTKATAGAAASGDAGK 253 GI L +W R+I+SPKDHP INQAEL HIE GGGLVDMD K AA G+ Sbjct: 182 VVGIALALIWGRIIYSPKDHPRINQAELAHIESGGGLVDMDNRKV-------AAPSTKGR 234 Query: 254 AKWGYIKQLLSNRMLLGVYIGQYCINTITYFFLTWFPVYLVQERGMSILKAGFVASIPAV 313 GYI+QLLSNRMLLGVYIGQYCIN ITYFFLTWFPVYLVQERGMSILKAGFVASIPAV Sbjct: 235 ---GYIRQLLSNRMLLGVYIGQYCINVITYFFLTWFPVYLVQERGMSILKAGFVASIPAV 291 Query: 314 CGFIGGVVGGLISDRLIKRGNSVTMSRKIPIVGGMLLSTTMILCNYVDAQWMVVGIMAVA 373 CGFIGGVVGGLISDRLIKRG SVT +RKIPIVGGMLLS TMILCNYV+AQWMVVGIMA+A Sbjct: 292 CGFIGGVVGGLISDRLIKRGLSVTWARKIPIVGGMLLSMTMILCNYVEAQWMVVGIMALA 351 Query: 374 FFGKGVGALGWAVVADTAPKEIVGLSGGLFNTFGNIAGITTPIVIGYILKETGSFSGALI 433 FFGKGVGALGWAVVADTAPK+IVGLSGGLFN FGN+AGITTPIVIGYI+KETGSFSGAL+ Sbjct: 352 FFGKGVGALGWAVVADTAPKQIVGLSGGLFNMFGNVAGITTPIVIGYIVKETGSFSGALV 411 Query: 434 FVGANALVTVISYLVIVKEIKRVELK 459 FVG NALVTVISYLVIVKEIKRVELK Sbjct: 412 FVGINALVTVISYLVIVKEIKRVELK 437 >ref|YP_276369.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. phaseolicola 1448A] gb|AAZ35003.1| MFS transporter, phthalate permease family [Pseudomonas syringae pv. phaseolicola 1448A] Length = 461 Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/444 (70%), Positives = 379/444 (85%), Gaps = 5/444 (1%) Query: 16 ENIKPSHVRYLILFMLFIVTTVNYADRATLSIAGTSMKSELGLDPVMMGYIFSAFSWAYV 75 + KP+HVRYLIL MLF+VTT+NYADRAT++IAG+S++ +LG+ PV +GYIFSAF WAYV Sbjct: 2 QKSKPTHVRYLILLMLFLVTTINYADRATIAIAGSSIQKDLGITPVTLGYIFSAFGWAYV 61 Query: 76 LAQLPGGWLLDRFGSKKIYALSIFLWSFFTLLQGGVTWFGTAAAVVLLFLLRFMVGLAEA 135 Q+PGGWLLDRFGSKK+YA+SIF WS FTLLQG V FG + A+V LF+LRF+VGLAEA Sbjct: 62 AGQIPGGWLLDRFGSKKVYAMSIFTWSLFTLLQGYVGEFGISTAIVALFMLRFLVGLAEA 121 Query: 136 PSFPANGRIVASWFPTAERGTASAIFNSAQYFAAVLFTPLMGWITHVYGWHHVFTVMGAF 195 PSFP N RIVA+WFPTAERGTASAIFNSAQYFA VLF PLMGWI + YGW HVF VMGA Sbjct: 122 PSFPGNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYTYGWQHVFVVMGAV 181 Query: 196 GILLTFLWIRVIHSPKDHPMINQAELQHIEQGGGLVDMDQAKTTKATAGAAASGDAGKAK 255 GIL + +W++VI+ P++HPMIN+AEL+HI G LVD+DQ K K A+SG K Sbjct: 182 GILFSMIWMKVIYGPRNHPMINEAELEHISSNGALVDLDQDK-GKGAQKTASSG----PK 236 Query: 256 WGYIKQLLSNRMLLGVYIGQYCINTITYFFLTWFPVYLVQERGMSILKAGFVASIPAVCG 315 W YI+QLL+NRM+LG+Y+ QYCIN ITYFFLTWFPVYLVQERGM+ILKAG +AS+PA+CG Sbjct: 237 WDYIRQLLTNRMMLGIYLSQYCINGITYFFLTWFPVYLVQERGMTILKAGIIASLPAICG 296 Query: 316 FIGGVVGGLISDRLIKRGNSVTMSRKIPIVGGMLLSTTMILCNYVDAQWMVVGIMAVAFF 375 FIGGV+GG+ISD L+++G+S+T +RK+PI+GG+LLST+++ CNYVD +W+VVG MA+AFF Sbjct: 297 FIGGVLGGIISDYLLRKGHSLTFARKVPIIGGLLLSTSIVTCNYVDIEWVVVGFMALAFF 356 Query: 376 GKGVGALGWAVVADTAPKEIVGLSGGLFNTFGNIAGITTPIVIGYILKETGSFSGALIFV 435 GKGVGALGWAV++D +PK+I GLSGGLFNTFGNIA ITTPIVIGYI+ TGSF AL+FV Sbjct: 357 GKGVGALGWAVMSDVSPKQIAGLSGGLFNTFGNIASITTPIVIGYIISSTGSFKWALVFV 416 Query: 436 GANALVTVISYLVIVKEIKRVELK 459 GANAL+ VISY+ IV EIKRVELK Sbjct: 417 GANALLAVISYIFIVGEIKRVELK 440 >ref|ZP_04586968.1| D-galactonate transporter [Pseudomonas syringae pv. oryzae str. 1_6] ref|ZP_04592824.1| D-galactonate transporter [Pseudomonas syringae pv. oryzae str. 1_6] gb|EGI01416.1| D-galactonate transporter [Pseudomonas syringae pv. oryzae str. 1_6] gb|EGI07288.1| D-galactonate transporter [Pseudomonas syringae pv. oryzae str. 1_6] Length = 461 Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/444 (70%), Positives = 379/444 (85%), Gaps = 5/444 (1%) Query: 16 ENIKPSHVRYLILFMLFIVTTVNYADRATLSIAGTSMKSELGLDPVMMGYIFSAFSWAYV 75 + KP+HVRYLIL MLF+VTT+NYADRAT++IAG+S++ +LG+ V +GYIFSAF WAYV Sbjct: 2 QKSKPTHVRYLILLMLFLVTTINYADRATIAIAGSSIQKDLGISAVTLGYIFSAFGWAYV 61 Query: 76 LAQLPGGWLLDRFGSKKIYALSIFLWSFFTLLQGGVTWFGTAAAVVLLFLLRFMVGLAEA 135 Q+PGGWLLDRFGSKK+YA+SIF WS FTLLQG V FG + A+V LF+LRF+VGLAEA Sbjct: 62 AGQIPGGWLLDRFGSKKVYAMSIFTWSLFTLLQGYVGEFGVSTAIVALFMLRFLVGLAEA 121 Query: 136 PSFPANGRIVASWFPTAERGTASAIFNSAQYFAAVLFTPLMGWITHVYGWHHVFTVMGAF 195 PSFP N RIVA+WFPTAERGTASAIFNSAQYFA VLF PLMGWI + YGW HVF VMGAF Sbjct: 122 PSFPGNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYTYGWQHVFVVMGAF 181 Query: 196 GILLTFLWIRVIHSPKDHPMINQAELQHIEQGGGLVDMDQAKTTKATAGAAASGDAGKAK 255 GI+ + +W++VI+ P++HPMIN+AE +HI G LVD+DQ K K+T A+SG K Sbjct: 182 GIVFSMVWMKVIYGPRNHPMINEAEFEHISNNGALVDLDQDK-GKSTQKTASSG----PK 236 Query: 256 WGYIKQLLSNRMLLGVYIGQYCINTITYFFLTWFPVYLVQERGMSILKAGFVASIPAVCG 315 W YI+QLL+NRM+LG+Y+ QYCIN ITYFFLTWFPVYLVQERGM+ILKAG +AS+PA+CG Sbjct: 237 WDYIRQLLTNRMMLGIYLSQYCINGITYFFLTWFPVYLVQERGMTILKAGMIASLPAICG 296 Query: 316 FIGGVVGGLISDRLIKRGNSVTMSRKIPIVGGMLLSTTMILCNYVDAQWMVVGIMAVAFF 375 FIGGV+GG+ISD L+++G+S+T +RK PI+GG+LLST+++ CNYVD +W+VVG MA+AFF Sbjct: 297 FIGGVLGGIISDYLLRKGHSLTFARKAPIIGGLLLSTSIVTCNYVDVEWVVVGFMALAFF 356 Query: 376 GKGVGALGWAVVADTAPKEIVGLSGGLFNTFGNIAGITTPIVIGYILKETGSFSGALIFV 435 GKGVGALGWAV++D +PK+I GLSGGLFNTFGN+A ITTPIVIGYI+ TGSF AL+FV Sbjct: 357 GKGVGALGWAVMSDVSPKQIAGLSGGLFNTFGNVASITTPIVIGYIISSTGSFKWALVFV 416 Query: 436 GANALVTVISYLVIVKEIKRVELK 459 GANALV VISY+ IV EIKRVELK Sbjct: 417 GANALVAVISYIFIVGEIKRVELK 440 >ref|ZP_06496848.1| D-galactonate transporter [Pseudomonas syringae pv. syringae FF5] gb|EGH79144.1| D-galactonate transporter [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 461 Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/444 (70%), Positives = 379/444 (85%), Gaps = 5/444 (1%) Query: 16 ENIKPSHVRYLILFMLFIVTTVNYADRATLSIAGTSMKSELGLDPVMMGYIFSAFSWAYV 75 + KP+HVRYLIL MLF+VTT+NYADRAT++IAG+S++ +LG+ V +GYIFSAF WAYV Sbjct: 2 QKSKPTHVRYLILLMLFLVTTINYADRATIAIAGSSIQKDLGISAVTLGYIFSAFGWAYV 61 Query: 76 LAQLPGGWLLDRFGSKKIYALSIFLWSFFTLLQGGVTWFGTAAAVVLLFLLRFMVGLAEA 135 Q+PGGWLLDRFGSKK+YA+SIF WS FTLLQG V FG + A+V LF+LRF+VGLAEA Sbjct: 62 AGQIPGGWLLDRFGSKKVYAMSIFTWSLFTLLQGYVGEFGVSTAIVALFMLRFLVGLAEA 121 Query: 136 PSFPANGRIVASWFPTAERGTASAIFNSAQYFAAVLFTPLMGWITHVYGWHHVFTVMGAF 195 PSFP N RIVA+WFPTAERGTASAIFNSAQYFA VLF PLMGWI + YGW HVF VMGAF Sbjct: 122 PSFPGNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYTYGWQHVFVVMGAF 181 Query: 196 GILLTFLWIRVIHSPKDHPMINQAELQHIEQGGGLVDMDQAKTTKATAGAAASGDAGKAK 255 GI+ + +W++VI+ P++HPMIN+AEL+HI G LVD+DQ K K T A+SG K Sbjct: 182 GIVFSMIWMKVIYGPRNHPMINEAELEHISSNGALVDLDQDK-GKGTQKTASSGP----K 236 Query: 256 WGYIKQLLSNRMLLGVYIGQYCINTITYFFLTWFPVYLVQERGMSILKAGFVASIPAVCG 315 W YI+QLL+NRM+LG+Y+ QYCIN ITYFFLTWFPVYLVQERGM+ILKAG +AS+PA+CG Sbjct: 237 WDYIRQLLTNRMMLGIYLSQYCINGITYFFLTWFPVYLVQERGMTILKAGIIASLPAICG 296 Query: 316 FIGGVVGGLISDRLIKRGNSVTMSRKIPIVGGMLLSTTMILCNYVDAQWMVVGIMAVAFF 375 FIGGV+GG+ISD L+++G+S+T +RK PI+GG+LLST+++ CNYVD +W+VVG MA+AFF Sbjct: 297 FIGGVLGGIISDYLLRKGHSLTFARKAPIIGGLLLSTSIVTCNYVDIEWVVVGFMALAFF 356 Query: 376 GKGVGALGWAVVADTAPKEIVGLSGGLFNTFGNIAGITTPIVIGYILKETGSFSGALIFV 435 GKGVGALGWAV++D +PK+I GLSGGLFNTFGNIA ITTPIVIGYI+ TGSF AL+FV Sbjct: 357 GKGVGALGWAVMSDVSPKQIAGLSGGLFNTFGNIASITTPIVIGYIISSTGSFKWALVFV 416 Query: 436 GANALVTVISYLVIVKEIKRVELK 459 GANAL+ VISY+ IV EIKRVELK Sbjct: 417 GANALLAVISYIFIVGEIKRVELK 440 >ref|ZP_06459609.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. aesculi str. NCPPB3681] ref|ZP_06480824.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. aesculi str. 2250] ref|ZP_07006427.1| D-galactarate permease [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFH98110.1| D-galactarate permease [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFW86151.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. glycinea str. race 4] gb|EGH04328.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. aesculi str. 0893_23] gb|EGH09539.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. glycinea str. race 4] gb|EGH85611.1| major facilitator superfamily transporter phthalate permease [Pseudomonas syringae pv. lachrymans str. M301315] Length = 461 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/444 (70%), Positives = 378/444 (85%), Gaps = 5/444 (1%) Query: 16 ENIKPSHVRYLILFMLFIVTTVNYADRATLSIAGTSMKSELGLDPVMMGYIFSAFSWAYV 75 + KP+HVRYLIL MLF+VTT+NYADRAT++IAG+S++ +LG+ PV +GYIFSAF WAYV Sbjct: 2 QKSKPTHVRYLILLMLFLVTTINYADRATIAIAGSSIQKDLGITPVTLGYIFSAFGWAYV 61 Query: 76 LAQLPGGWLLDRFGSKKIYALSIFLWSFFTLLQGGVTWFGTAAAVVLLFLLRFMVGLAEA 135 Q+PGGWLLDRFGSKK+YA+SIF WS FTLLQG V FG + A+V LF+LRF+VGLAEA Sbjct: 62 AGQIPGGWLLDRFGSKKVYAMSIFTWSLFTLLQGYVGEFGISTAIVALFMLRFLVGLAEA 121 Query: 136 PSFPANGRIVASWFPTAERGTASAIFNSAQYFAAVLFTPLMGWITHVYGWHHVFTVMGAF 195 PSFP N RIVA+WFPTAERGTASAIFNSAQYFA VLF PLMGWI + YGW HVF VMGA Sbjct: 122 PSFPGNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYTYGWQHVFVVMGAV 181 Query: 196 GILLTFLWIRVIHSPKDHPMINQAELQHIEQGGGLVDMDQAKTTKATAGAAASGDAGKAK 255 GIL + +W++VI+ P++HPMIN+AEL+HI G LVD+DQ K K A+SG K Sbjct: 182 GILFSMIWMKVIYGPRNHPMINEAELEHISSNGALVDLDQDK-GKGAQKTASSGP----K 236 Query: 256 WGYIKQLLSNRMLLGVYIGQYCINTITYFFLTWFPVYLVQERGMSILKAGFVASIPAVCG 315 W YI+QLL+NRM+LG+Y+ QYCIN ITYFFLTWFPVYLVQERGM+ILKAG +AS+PA+CG Sbjct: 237 WDYIRQLLTNRMMLGIYLSQYCINGITYFFLTWFPVYLVQERGMTILKAGIIASLPAICG 296 Query: 316 FIGGVVGGLISDRLIKRGNSVTMSRKIPIVGGMLLSTTMILCNYVDAQWMVVGIMAVAFF 375 FIGGV+GG+ISD L+++G+S+T +RK PI+GG+LLST+++ CNYVD +W+VVG MA+AFF Sbjct: 297 FIGGVLGGIISDYLLRKGHSLTFARKAPIIGGLLLSTSIVTCNYVDIEWVVVGFMALAFF 356 Query: 376 GKGVGALGWAVVADTAPKEIVGLSGGLFNTFGNIAGITTPIVIGYILKETGSFSGALIFV 435 GKGVGALGWAV++D +PK+I GLSGGLFNTFGNIA ITTPIVIGYI+ TGSF AL+FV Sbjct: 357 GKGVGALGWAVMSDVSPKQIAGLSGGLFNTFGNIASITTPIVIGYIISSTGSFKWALVFV 416 Query: 436 GANALVTVISYLVIVKEIKRVELK 459 GANAL+ VISY+ IV EIKRVELK Sbjct: 417 GANALLAVISYIFIVGEIKRVELK 440